RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 KIZQ2M2Z5 673 aa9.85□□□□□ -0.83
DDX56-211ENST00000479602 ODR4Q5SWX8 454 aa9.85□□□□□ -0.83
DDX56-211ENST00000479602 PDE12Q6L8Q7 609 aaKnown RBP9.85□□□□□ -0.83
DDX56-211ENST00000479602 RINT1Q6NUQ1 792 aa9.85□□□□□ -0.83
DDX56-211ENST00000479602 PADI6Q6TGC4 694 aa9.85□□□□□ -0.83
DDX56-211ENST00000479602 HFE2Q6ZVN8 426 aa9.85□□□□□ -0.83
DDX56-211ENST00000479602 USP49Q70CQ1 688 aa9.85□□□□□ -0.83
DDX56-211ENST00000479602 KCNK18Q7Z418 384 aa9.85□□□□□ -0.83
DDX56-211ENST00000479602 FMR1NBQ8N0W7 255 aaPredicted RBP9.85□□□□□ -0.83
DDX56-211ENST00000479602 SPATA20Q8TB22 786 aa9.85□□□□□ -0.83
DDX56-211ENST00000479602 LRRC15Q8TF66 581 aa9.85□□□□□ -0.83
DDX56-211ENST00000479602 TMEM174Q8WUU8 243 aa9.85□□□□□ -0.83
DDX56-211ENST00000479602 PSPC1Q8WXF1 523 aaKnown RBP9.85□□□□□ -0.83
DDX56-211ENST00000479602 PRIMPOLQ96LW4 560 aa9.85□□□□□ -0.83
DDX56-211ENST00000479602 MAP7D2Q96T17 732 aa9.85□□□□□ -0.83
DDX56-211ENST00000479602 MTRQ99707 1265 aa9.85□□□□□ -0.83
DDX56-211ENST00000479602 TRAIPQ9BWF2 469 aa9.85□□□□□ -0.83
DDX56-211ENST00000479602 IGFLR1Q9H665 355 aa9.85□□□□□ -0.83
DDX56-211ENST00000479602 HCSTQ9UBK5 93 aa9.85□□□□□ -0.83
DDX56-211ENST00000479602 WDR87Q6ZQQ6 2873 aa9.85□□□□□ -0.83
DDX56-211ENST00000479602 EVPLQ92817 2033 aa9.85□□□□□ -0.83
DDX56-211ENST00000479602 NLRC5Q86WI3 1866 aa9.85□□□□□ -0.83
DDX56-211ENST00000479602 A0A087X0B3 334 aa9.84□□□□□ -0.83
DDX56-211ENST00000479602 A0A0U1RQF3 1178 aa9.84□□□□□ -0.83
DDX56-211ENST00000479602 PVALEFA0A1B0GWK0 134 aa9.84□□□□□ -0.83
DDX56-211ENST00000479602 ARHGEF35A5YM69 484 aa9.84□□□□□ -0.83
DDX56-211ENST00000479602 H0YCG3 227 aa9.84□□□□□ -0.83
DDX56-211ENST00000479602 GOLGA6L22H0YM25 854 aa9.84□□□□□ -0.83
DDX56-211ENST00000479602 FGF18O76093 207 aa9.84□□□□□ -0.83
DDX56-211ENST00000479602 PLA2G4BP0C869 781 aa9.84□□□□□ -0.83
DDX56-211ENST00000479602 GAP43P17677 238 aa9.84□□□□□ -0.83
DDX56-211ENST00000479602 EIF4BP23588 611 aaKnown RBP9.84□□□□□ -0.83
DDX56-211ENST00000479602 NAMPTP43490 491 aa9.84□□□□□ -0.83
DDX56-211ENST00000479602 NRIP1P48552 1158 aa9.84□□□□□ -0.83
DDX56-211ENST00000479602 POLGP54098 1239 aaPredicted RBP9.84□□□□□ -0.83
DDX56-211ENST00000479602 CEBPZQ03701 1054 aaKnown RBP9.84□□□□□ -0.83
DDX56-211ENST00000479602 MAPK7Q13164 816 aa9.84□□□□□ -0.83
DDX56-211ENST00000479602 SNW1Q13573 536 aaKnown RBP9.84□□□□□ -0.83
DDX56-211ENST00000479602 ALCAMQ13740 583 aa9.84□□□□□ -0.83
DDX56-211ENST00000479602 FAM187BQ17R55 369 aa9.84□□□□□ -0.83
DDX56-211ENST00000479602 COBLL1Q53SF7 1204 aa9.84□□□□□ -0.83
DDX56-211ENST00000479602 XKR9Q5GH70 373 aa9.84□□□□□ -0.83
DDX56-211ENST00000479602 RRAGBQ5VZM2 374 aa9.84□□□□□ -0.83
DDX56-211ENST00000479602 SYCE2Q6PIF2 218 aa9.84□□□□□ -0.83
DDX56-211ENST00000479602 FOXR2Q6PJQ5 311 aa9.84□□□□□ -0.83
DDX56-211ENST00000479602 PPP4R3CPQ6ZMV5 832 aa9.84□□□□□ -0.83
DDX56-211ENST00000479602 CKAP2LQ8IYA6 745 aa9.84□□□□□ -0.83
DDX56-211ENST00000479602 COLGALT1Q8NBJ5 622 aa9.84□□□□□ -0.83
DDX56-211ENST00000479602 HVCN1Q96D96 273 aa9.84□□□□□ -0.83
DDX56-211ENST00000479602 FBXL18Q96ME1 805 aa9.84□□□□□ -0.83
DDX56-211ENST00000479602 POP1Q99575 1024 aaKnown RBP9.84□□□□□ -0.83
DDX56-211ENST00000479602 CDCA3Q99618 268 aaPredicted RBP9.84□□□□□ -0.83
DDX56-211ENST00000479602 OSMRQ99650 979 aa9.84□□□□□ -0.83
DDX56-211ENST00000479602 TMEM117Q9H0C3 514 aa9.84□□□□□ -0.83
DDX56-211ENST00000479602 C2orf40Q9H1Z8 148 aa9.84□□□□□ -0.83
DDX56-211ENST00000479602 RNF216Q9NWF9 866 aaPredicted RBP9.84□□□□□ -0.83
DDX56-211ENST00000479602 MUTYHQ9UIF7 546 aa9.84□□□□□ -0.83
DDX56-211ENST00000479602 TBKBP1A7MCY6 615 aa9.83□□□□□ -0.84
DDX56-211ENST00000479602 DDX11L8A8MPP1 907 aa9.83□□□□□ -0.84
DDX56-211ENST00000479602 PER2O15055 1255 aa9.83□□□□□ -0.84
DDX56-211ENST00000479602 MBD3O95983 291 aa9.83□□□□□ -0.84
DDX56-211ENST00000479602 VTNP04004 478 aa9.83□□□□□ -0.84
DDX56-211ENST00000479602 FGFR1P11362 822 aa9.83□□□□□ -0.84
DDX56-211ENST00000479602 DARSP14868 501 aaKnown RBP9.83□□□□□ -0.84
DDX56-211ENST00000479602 NCLP19338 710 aaKnown RBP9.83□□□□□ -0.84
DDX56-211ENST00000479602 CDC25AP30304 524 aa9.83□□□□□ -0.84
DDX56-211ENST00000479602 STAT6P42226 847 aa9.83□□□□□ -0.84
DDX56-211ENST00000479602 SYKP43405 635 aa9.83□□□□□ -0.84
DDX56-211ENST00000479602 GPC3P51654 580 aa9.83□□□□□ -0.84
DDX56-211ENST00000479602 EFNA5P52803 228 aa9.83□□□□□ -0.84
DDX56-211ENST00000479602 NPEPPSP55786 919 aa9.83□□□□□ -0.84
DDX56-211ENST00000479602 RBM10P98175 930 aaKnown RBP9.83□□□□□ -0.84
DDX56-211ENST00000479602 NHLH1Q02575 133 aa9.83□□□□□ -0.84
DDX56-211ENST00000479602 CLUL1Q15846 466 aa9.83□□□□□ -0.84
DDX56-211ENST00000479602 MTERF2Q49AM1 385 aa9.83□□□□□ -0.84
DDX56-211ENST00000479602 PAN2Q504Q3 1202 aaKnown RBP9.83□□□□□ -0.84
DDX56-211ENST00000479602 NT5DC1Q5TFE4 455 aa9.83□□□□□ -0.84
DDX56-211ENST00000479602 FOXD4L5Q5VV16 416 aaPredicted RBP9.83□□□□□ -0.84
DDX56-211ENST00000479602 EFCAB12Q6NXP0 572 aa9.83□□□□□ -0.84
DDX56-211ENST00000479602 TRIM67Q6ZTA4 783 aa9.83□□□□□ -0.84
DDX56-211ENST00000479602 SV2BQ7L1I2 683 aa9.83□□□□□ -0.84
DDX56-211ENST00000479602 SRGAP1Q7Z6B7 1085 aa9.83□□□□□ -0.84
DDX56-211ENST00000479602 DAW1Q8N136 415 aa9.83□□□□□ -0.84
DDX56-211ENST00000479602 PIGOQ8TEQ8 1089 aa9.83□□□□□ -0.84
DDX56-211ENST00000479602 FOXD4L4Q8WXT5 416 aaPredicted RBP9.83□□□□□ -0.84
DDX56-211ENST00000479602 PPP2R3CQ969Q6 453 aa9.83□□□□□ -0.84
DDX56-211ENST00000479602 DNAJC19Q96DA6 116 aa9.83□□□□□ -0.84
DDX56-211ENST00000479602 CCDC51Q96ER9 411 aa9.83□□□□□ -0.84
DDX56-211ENST00000479602 CCDC43Q96MW1 224 aaKnown RBP9.83□□□□□ -0.84
DDX56-211ENST00000479602 C7orf25Q9BPX7 421 aa9.83□□□□□ -0.84
DDX56-211ENST00000479602 PHF7Q9BWX1 381 aaPredicted RBP9.83□□□□□ -0.84
DDX56-211ENST00000479602 TRIM9Q9C026 710 aa9.83□□□□□ -0.84
DDX56-211ENST00000479602 INO80BQ9C086 356 aaPredicted RBP9.83□□□□□ -0.84
DDX56-211ENST00000479602 TLR9Q9NR96 1032 aa9.83□□□□□ -0.84
DDX56-211ENST00000479602 BMP2KQ9NSY1 1161 aaPredicted RBP9.83□□□□□ -0.84
DDX56-211ENST00000479602 LARSQ9P2J5 1176 aaKnown RBP9.83□□□□□ -0.84
DDX56-211ENST00000479602 ARHGAP28Q9P2N2 729 aa9.83□□□□□ -0.84
DDX56-211ENST00000479602 BARX2Q9UMQ3 279 aaPredicted RBP9.83□□□□□ -0.84
DDX56-211ENST00000479602 USP15Q9Y4E8 981 aaPredicted RBP9.83□□□□□ -0.84
DDX56-211ENST00000479602 PCDHB12Q9Y5F1 795 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms