RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 CCDC113Q9H0I3 377 aa12.62□□□□□ -0.39
CBWD3-206ENST00000478048 CLSTN2Q9H4D0 955 aa12.62□□□□□ -0.39
CBWD3-206ENST00000478048 ERVK-5Q9HDB9 667 aa12.62□□□□□ -0.39
CBWD3-206ENST00000478048 DENND3A2RUS2 1198 aa12.61□□□□□ -0.39
CBWD3-206ENST00000478048 B4GALT5O43286 388 aa12.61□□□□□ -0.39
CBWD3-206ENST00000478048 PARNO95453 639 aaKnown RBP12.61□□□□□ -0.39
CBWD3-206ENST00000478048 MYBP10242 640 aa12.61□□□□□ -0.39
CBWD3-206ENST00000478048 MAGEA10P43363 369 aaPredicted RBP12.61□□□□□ -0.39
CBWD3-206ENST00000478048 SMTNP53814 917 aa12.61□□□□□ -0.39
CBWD3-206ENST00000478048 PAK2Q13177 524 aa12.61□□□□□ -0.39
CBWD3-206ENST00000478048 PLEKHG4Q58EX7 1191 aa12.61□□□□□ -0.39
CBWD3-206ENST00000478048 CATSPER4Q7RTX7 472 aa12.61□□□□□ -0.39
CBWD3-206ENST00000478048 ZNF720Q7Z2F6 126 aa12.61□□□□□ -0.39
CBWD3-206ENST00000478048 ZBTB8OSQ8IWT0 167 aa12.61□□□□□ -0.39
CBWD3-206ENST00000478048 USP38Q8NB14 1042 aa12.61□□□□□ -0.39
CBWD3-206ENST00000478048 SPATA20Q8TB22 786 aa12.61□□□□□ -0.39
CBWD3-206ENST00000478048 LBHD1Q9BQE6 289 aaPredicted RBP12.61□□□□□ -0.39
CBWD3-206ENST00000478048 TMX1Q9H3N1 280 aa12.61□□□□□ -0.39
CBWD3-206ENST00000478048 FZD8Q9H461 694 aa12.61□□□□□ -0.39
CBWD3-206ENST00000478048 MRPL44Q9H9J2 332 aaKnown RBP12.61□□□□□ -0.39
CBWD3-206ENST00000478048 SLC39A2Q9NP94 309 aa12.61□□□□□ -0.39
CBWD3-206ENST00000478048 OLFML3Q9NRN5 406 aa12.61□□□□□ -0.39
CBWD3-206ENST00000478048 SEL1LQ9UBV2 794 aa12.61□□□□□ -0.39
CBWD3-206ENST00000478048 SQORQ9Y6N5 450 aa12.61□□□□□ -0.39
CBWD3-206ENST00000478048 K7ERI5 159 aa12.6□□□□□ -0.39
CBWD3-206ENST00000478048 MGEA5O60502 916 aa12.6□□□□□ -0.39
CBWD3-206ENST00000478048 MBD3O95983 291 aa12.6□□□□□ -0.39
CBWD3-206ENST00000478048 PRKCBP05771 671 aa12.6□□□□□ -0.39
CBWD3-206ENST00000478048 MAPTP10636 758 aaKnown RBP12.6□□□□□ -0.39
CBWD3-206ENST00000478048 RFC2P35250 354 aa12.6□□□□□ -0.39
CBWD3-206ENST00000478048 KCNA1Q09470 495 aa12.6□□□□□ -0.39
CBWD3-206ENST00000478048 STK4Q13043 487 aa12.6□□□□□ -0.39
CBWD3-206ENST00000478048 NFKBIBQ15653 356 aa12.6□□□□□ -0.39
CBWD3-206ENST00000478048 FAM26FQ5R3K3 315 aa12.6□□□□□ -0.39
CBWD3-206ENST00000478048 NUP62CLQ9H1M0 184 aa12.6□□□□□ -0.39
CBWD3-206ENST00000478048 C2orf40Q9H1Z8 148 aa12.6□□□□□ -0.39
CBWD3-206ENST00000478048 IKZF4Q9H2S9 585 aa12.6□□□□□ -0.39
CBWD3-206ENST00000478048 IL23AQ9NPF7 189 aa12.6□□□□□ -0.39
CBWD3-206ENST00000478048 EXOC1Q9NV70 894 aa12.6□□□□□ -0.39
CBWD3-206ENST00000478048 HOOK1Q9UJC3 728 aaKnown RBP12.6□□□□□ -0.39
CBWD3-206ENST00000478048 RANBP2P49792 3224 aaKnown RBP12.6□□□□□ -0.39
CBWD3-206ENST00000478048 GPR182O15218 404 aa12.59□□□□□ -0.39
CBWD3-206ENST00000478048 TSPAN1O60635 241 aa12.59□□□□□ -0.39
CBWD3-206ENST00000478048 RHOBTB3O94955 611 aa12.59□□□□□ -0.39
CBWD3-206ENST00000478048 GCNT3O95395 438 aa12.59□□□□□ -0.39
CBWD3-206ENST00000478048 SFPQP23246 707 aaKnown RBP eCLIP12.59□□□□□ -0.39
CBWD3-206ENST00000478048 HOXA11P31270 313 aaPredicted RBP12.59□□□□□ -0.39
CBWD3-206ENST00000478048 SARSP49591 514 aaKnown RBP12.59□□□□□ -0.39
CBWD3-206ENST00000478048 EFNA5P52803 228 aa12.59□□□□□ -0.39
CBWD3-206ENST00000478048 PPIGQ13427 754 aaKnown RBP eCLIP12.59□□□□□ -0.39
CBWD3-206ENST00000478048 MAPK6Q16659 721 aa12.59□□□□□ -0.39
CBWD3-206ENST00000478048 ISM2Q6H9L7 571 aa12.59□□□□□ -0.39
CBWD3-206ENST00000478048 CDR2LQ86X02 465 aaPredicted RBP12.59□□□□□ -0.39
CBWD3-206ENST00000478048 KIAA0895Q8NCT3 520 aa12.59□□□□□ -0.39
CBWD3-206ENST00000478048 SMARCE1Q969G3 411 aa12.59□□□□□ -0.39
CBWD3-206ENST00000478048 CPB2Q96IY4 423 aa12.59□□□□□ -0.39
CBWD3-206ENST00000478048 STRA6Q9BX79 667 aa12.59□□□□□ -0.39
CBWD3-206ENST00000478048 TMEM134Q9H6X4 195 aa12.59□□□□□ -0.39
CBWD3-206ENST00000478048 KCNG1Q9UIX4 513 aa12.59□□□□□ -0.39
CBWD3-206ENST00000478048 GDAQ9Y2T3 454 aa12.59□□□□□ -0.39
CBWD3-206ENST00000478048 MICAL3Q7RTP6 2002 aa12.59□□□□□ -0.39
CBWD3-206ENST00000478048 PHLPP2Q6ZVD8 1323 aa12.59□□□□□ -0.39
CBWD3-206ENST00000478048 ERLIN2O94905 339 aa12.59□□□□□ -0.39
CBWD3-206ENST00000478048 PRPF6O94906 941 aaKnown RBP12.59□□□□□ -0.39
CBWD3-206ENST00000478048 SMC2O95347 1197 aa12.59□□□□□ -0.39
CBWD3-206ENST00000478048 ARF4P18085 180 aaPredicted RBP12.59□□□□□ -0.39
CBWD3-206ENST00000478048 GTF2BQ00403 316 aa12.59□□□□□ -0.39
CBWD3-206ENST00000478048 KCNB1Q14721 858 aa12.59□□□□□ -0.39
CBWD3-206ENST00000478048 FAM187BQ17R55 369 aa12.59□□□□□ -0.39
CBWD3-206ENST00000478048 TMEM240Q5SV17 173 aa12.59□□□□□ -0.39
CBWD3-206ENST00000478048 ZNF365Q70YC5 407 aa12.59□□□□□ -0.39
CBWD3-206ENST00000478048 OTOP2Q7RTS6 562 aa12.59□□□□□ -0.39
CBWD3-206ENST00000478048 RTN4RL1Q86UN2 441 aaPredicted RBP12.59□□□□□ -0.39
CBWD3-206ENST00000478048 RPUSD2Q8IZ73 545 aaKnown RBP12.59□□□□□ -0.39
CBWD3-206ENST00000478048 LINC01599Q8WXQ3 324 aa12.59□□□□□ -0.39
CBWD3-206ENST00000478048 SEPT8Q92599 483 aa12.59□□□□□ -0.39
CBWD3-206ENST00000478048 GSDMAQ96QA5 445 aa12.59□□□□□ -0.39
CBWD3-206ENST00000478048 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.59□□□□□ -0.39
CBWD3-206ENST00000478048 ST6GALNAC4Q9H4F1 302 aa12.59□□□□□ -0.39
CBWD3-206ENST00000478048 AGPAT5Q9NUQ2 364 aa12.59□□□□□ -0.39
CBWD3-206ENST00000478048 PRMT7Q9NVM4 692 aaPredicted RBP12.59□□□□□ -0.39
CBWD3-206ENST00000478048 TMEM63CQ9P1W3 806 aa12.59□□□□□ -0.39
CBWD3-206ENST00000478048 TBX20Q9UMR3 447 aa12.59□□□□□ -0.39
CBWD3-206ENST00000478048 PIN4Q9Y237 131 aaKnown RBP12.59□□□□□ -0.39
CBWD3-206ENST00000478048 BIN1O00499 593 aa12.58□□□□□ -0.4
CBWD3-206ENST00000478048 ACKR2O00590 384 aa12.58□□□□□ -0.4
CBWD3-206ENST00000478048 PRPF4BQ13523 1007 aaKnown RBP12.58□□□□□ -0.4
CBWD3-206ENST00000478048 DSC3Q14574 896 aa12.58□□□□□ -0.4
CBWD3-206ENST00000478048 SWT1Q5T5J6 900 aaKnown RBP12.58□□□□□ -0.4
CBWD3-206ENST00000478048 NT5DC1Q5TFE4 455 aa12.58□□□□□ -0.4
CBWD3-206ENST00000478048 CNKSR3Q6P9H4 555 aa12.58□□□□□ -0.4
CBWD3-206ENST00000478048 EPM2AIP1Q7L775 607 aaPredicted RBP12.58□□□□□ -0.4
CBWD3-206ENST00000478048 SMYD4Q8IYR2 804 aaPredicted RBP12.58□□□□□ -0.4
CBWD3-206ENST00000478048 KCNN1Q92952 543 aa12.58□□□□□ -0.4
CBWD3-206ENST00000478048 TARS2Q9BW92 718 aaKnown RBP12.58□□□□□ -0.4
CBWD3-206ENST00000478048 MAN1B1Q9UKM7 699 aa12.58□□□□□ -0.4
CBWD3-206ENST00000478048 H0YCG3 227 aa12.57□□□□□ -0.4
CBWD3-206ENST00000478048 PFKMP08237 780 aa12.57□□□□□ -0.4
CBWD3-206ENST00000478048 BMP6P22004 513 aa12.57□□□□□ -0.4
CBWD3-206ENST00000478048 HOXD13P35453 343 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms