RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 IP6K2Q9UHH9 426 aa6.56□□□□□ -1.36
PTCD3-211ENST00000476215 TCEAL9Q9UHQ7 104 aa6.56□□□□□ -1.36
PTCD3-211ENST00000476215 EID1Q9Y6B2 187 aa6.56□□□□□ -1.36
PTCD3-211ENST00000476215 A0A1W2PR48 441 aa6.55□□□□□ -1.36
PTCD3-211ENST00000476215 PRAMEF4O60810 478 aa6.55□□□□□ -1.36
PTCD3-211ENST00000476215 RAD17O75943 681 aa6.55□□□□□ -1.36
PTCD3-211ENST00000476215 CT47B1P0C2W7 299 aaPredicted RBP6.55□□□□□ -1.36
PTCD3-211ENST00000476215 C5AR1P21730 350 aa6.55□□□□□ -1.36
PTCD3-211ENST00000476215 MALLQ13021 153 aa6.55□□□□□ -1.36
PTCD3-211ENST00000476215 PUM1Q14671 1186 aaKnown RBP eCLIP6.55□□□□□ -1.369e-7■□□□□ 9.3
PTCD3-211ENST00000476215 CPA6Q8N4T0 437 aa6.55□□□□□ -1.36
PTCD3-211ENST00000476215 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.55□□□□□ -1.36
PTCD3-211ENST00000476215 EDAQ92838 391 aa6.55□□□□□ -1.36
PTCD3-211ENST00000476215 PAWRQ96IZ0 340 aaKnown RBP6.55□□□□□ -1.36
PTCD3-211ENST00000476215 C14orf93Q9H972 538 aaKnown RBP6.55□□□□□ -1.36
PTCD3-211ENST00000476215 ZIM2Q9NZV7 527 aa6.55□□□□□ -1.36
PTCD3-211ENST00000476215 ZFR2Q9UPR6 939 aaKnown RBP6.55□□□□□ -1.36
PTCD3-211ENST00000476215 DNM3Q9UQ16 869 aa6.55□□□□□ -1.36
PTCD3-211ENST00000476215 E2F8A0AVK6 867 aa6.54□□□□□ -1.36
PTCD3-211ENST00000476215 ALDH1A2O94788 518 aa6.54□□□□□ -1.36
PTCD3-211ENST00000476215 TOX4O94842 621 aa6.54□□□□□ -1.36
PTCD3-211ENST00000476215 LTA4HP09960 611 aaKnown RBP6.54□□□□□ -1.36
PTCD3-211ENST00000476215 CR2P20023 1033 aa6.54□□□□□ -1.36
PTCD3-211ENST00000476215 BPIFB4P59827 614 aa6.54□□□□□ -1.36
PTCD3-211ENST00000476215 ACAP1Q15027 740 aa6.54□□□□□ -1.36
PTCD3-211ENST00000476215 KRT40Q6A162 431 aa6.54□□□□□ -1.36
PTCD3-211ENST00000476215 TAX1BP1Q86VP1 789 aa6.54□□□□□ -1.36
PTCD3-211ENST00000476215 ANKRD53Q8N9V6 530 aa6.54□□□□□ -1.36
PTCD3-211ENST00000476215 LRRC37BQ96QE4 947 aa6.54□□□□□ -1.36
PTCD3-211ENST00000476215 ADI1Q9BV57 179 aa6.54□□□□□ -1.36
PTCD3-211ENST00000476215 SLC6A15Q9H2J7 730 aa6.54□□□□□ -1.36
PTCD3-211ENST00000476215 GREM2Q9H772 168 aa6.54□□□□□ -1.36
PTCD3-211ENST00000476215 DMRT3Q9NQL9 472 aa6.54□□□□□ -1.36
PTCD3-211ENST00000476215 PUF60Q9UHX1 559 aaKnown RBP6.54□□□□□ -1.36
PTCD3-211ENST00000476215 TUBD1Q9UJT1 453 aa6.54□□□□□ -1.36
PTCD3-211ENST00000476215 ZNF180Q9UJW8 692 aa6.54□□□□□ -1.36
PTCD3-211ENST00000476215 TCAF1Q9Y4C2 921 aa6.54□□□□□ -1.36
PTCD3-211ENST00000476215 TMEM127O75204 238 aa6.53□□□□□ -1.36
PTCD3-211ENST00000476215 ABLIM3O94929 683 aa6.53□□□□□ -1.36
PTCD3-211ENST00000476215 IL33O95760 270 aa6.53□□□□□ -1.36
PTCD3-211ENST00000476215 ZSCAN20P17040 1043 aaPredicted RBP6.53□□□□□ -1.36
PTCD3-211ENST00000476215 CTSSP25774 331 aa6.53□□□□□ -1.36
PTCD3-211ENST00000476215 KIR2DL3P43628 341 aa6.53□□□□□ -1.36
PTCD3-211ENST00000476215 ADCY7P51828 1080 aa6.53□□□□□ -1.36
PTCD3-211ENST00000476215 MEF2AQ02078 507 aaPredicted RBP6.53□□□□□ -1.36
PTCD3-211ENST00000476215 KIF23Q02241 960 aaPredicted RBP6.53□□□□□ -1.36
PTCD3-211ENST00000476215 UBE3CQ15386 1083 aa6.53□□□□□ -1.36
PTCD3-211ENST00000476215 TMEM240Q5SV17 173 aa6.53□□□□□ -1.36
PTCD3-211ENST00000476215 ABHD15Q6UXT9 468 aa6.53□□□□□ -1.36
PTCD3-211ENST00000476215 TAS1R1Q7RTX1 841 aa6.53□□□□□ -1.36
PTCD3-211ENST00000476215 CMTR2Q8IYT2 770 aaKnown RBP6.53□□□□□ -1.36
PTCD3-211ENST00000476215 FUKQ8N0W3 1084 aa6.53□□□□□ -1.36
PTCD3-211ENST00000476215 MSL3Q8N5Y2 521 aaKnown RBP6.53□□□□□ -1.36
PTCD3-211ENST00000476215 RIN2Q8WYP3 895 aaPredicted RBP6.53□□□□□ -1.36
PTCD3-211ENST00000476215 RPL10LQ96L21 214 aaKnown RBP6.53□□□□□ -1.36
PTCD3-211ENST00000476215 C12orf65Q9H3J6 166 aaKnown RBP6.53□□□□□ -1.36
PTCD3-211ENST00000476215 ING3Q9NXR8 418 aa6.53□□□□□ -1.36
PTCD3-211ENST00000476215 RPTORQ8N122 1335 aa6.52□□□□□ -1.37
PTCD3-211ENST00000476215 MUSKO15146 869 aa6.52□□□□□ -1.37
PTCD3-211ENST00000476215 AKR1B10O60218 316 aa6.52□□□□□ -1.37
PTCD3-211ENST00000476215 PF4V1P10720 104 aa6.52□□□□□ -1.37
PTCD3-211ENST00000476215 GSPT1P15170 499 aaKnown RBP6.52□□□□□ -1.37
PTCD3-211ENST00000476215 MCAMP43121 646 aa6.52□□□□□ -1.37
PTCD3-211ENST00000476215 SLC16A1P53985 500 aa6.52□□□□□ -1.37
PTCD3-211ENST00000476215 NOMO1Q15155 1222 aa6.52□□□□□ -1.37
PTCD3-211ENST00000476215 PPP2R5AQ15172 486 aa6.52□□□□□ -1.37
PTCD3-211ENST00000476215 NFE2Q16621 373 aaPredicted RBP6.52□□□□□ -1.37
PTCD3-211ENST00000476215 FAM180AQ6UWF9 173 aa6.52□□□□□ -1.37
PTCD3-211ENST00000476215 Q6ZSN1 163 aa6.52□□□□□ -1.37
PTCD3-211ENST00000476215 THEMISQ8N1K5 641 aaPredicted RBP6.52□□□□□ -1.37
PTCD3-211ENST00000476215 GPR156Q8NFN8 814 aa6.52□□□□□ -1.37
PTCD3-211ENST00000476215 SNX33Q8WV41 574 aa6.52□□□□□ -1.37
PTCD3-211ENST00000476215 JPH3Q8WXH2 748 aaPredicted RBP6.52□□□□□ -1.37
PTCD3-211ENST00000476215 HSPBAP1Q96EW2 488 aa6.52□□□□□ -1.37
PTCD3-211ENST00000476215 RTFDC1Q9BY42 306 aaPredicted RBP6.52□□□□□ -1.37
PTCD3-211ENST00000476215 RHOBTB2Q9BYZ6 727 aa6.52□□□□□ -1.37
PTCD3-211ENST00000476215 CDH19Q9H159 772 aa6.52□□□□□ -1.37
PTCD3-211ENST00000476215 DEF6Q9H4E7 631 aa6.52□□□□□ -1.37
PTCD3-211ENST00000476215 TLR9Q9NR96 1032 aa6.52□□□□□ -1.37
PTCD3-211ENST00000476215 RBM12Q9NTZ6 932 aaKnown RBP6.52□□□□□ -1.37
PTCD3-211ENST00000476215 NCDNQ9UBB6 729 aa6.52□□□□□ -1.37
PTCD3-211ENST00000476215 SCOCQ9UIL1 159 aa6.52□□□□□ -1.37
PTCD3-211ENST00000476215 GIT1Q9Y2X7 761 aa6.52□□□□□ -1.37
PTCD3-211ENST00000476215 ZRANB2O95218 330 aaKnown RBP eCLIP6.51□□□□□ -1.379e-6■□□□□ 10.3
PTCD3-211ENST00000476215 JUNP05412 331 aaKnown RBP6.51□□□□□ -1.37
PTCD3-211ENST00000476215 VSIG10L2P0DP72 767 aa6.51□□□□□ -1.37
PTCD3-211ENST00000476215 COMTP21964 271 aa6.51□□□□□ -1.37
PTCD3-211ENST00000476215 ADSLP30566 484 aaPredicted RBP6.51□□□□□ -1.37
PTCD3-211ENST00000476215 RPS19P39019 145 aaKnown RBP6.51□□□□□ -1.37
PTCD3-211ENST00000476215 ADKP55263 362 aaKnown RBP6.51□□□□□ -1.37
PTCD3-211ENST00000476215 LRRC41Q15345 812 aa6.51□□□□□ -1.37
PTCD3-211ENST00000476215 UAP1L1Q3KQV9 507 aa6.51□□□□□ -1.37
PTCD3-211ENST00000476215 HS1BP3Q53T59 392 aa6.51□□□□□ -1.37
PTCD3-211ENST00000476215 ZNF585AQ6P3V2 769 aa6.51□□□□□ -1.37
PTCD3-211ENST00000476215 MAMDC4Q6UXC1 1216 aa6.51□□□□□ -1.37
PTCD3-211ENST00000476215 POLNQ7Z5Q5 900 aa6.51□□□□□ -1.37
PTCD3-211ENST00000476215 MIER2Q8N344 545 aa6.51□□□□□ -1.37
PTCD3-211ENST00000476215 GIMAP8Q8ND71 665 aaPredicted RBP6.51□□□□□ -1.37
PTCD3-211ENST00000476215 NRG4Q8WWG1 115 aa6.51□□□□□ -1.37
PTCD3-211ENST00000476215 DPYSL5Q9BPU6 564 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms