RNA–Protein interactions for RNA: ENST00000476061.5

PTPN7-208, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-208ENST00000476061 DSC1Q08554 894 aa11.01□□□□□ -0.65
PTPN7-208ENST00000476061 ST3GAL1Q11201 340 aa11.01□□□□□ -0.65
PTPN7-208ENST00000476061 SAFBQ15424 915 aaKnown RBP eCLIP11.01□□□□□ -0.65
PTPN7-208ENST00000476061 AMHR2Q16671 573 aa11.01□□□□□ -0.65
PTPN7-208ENST00000476061 ATAT1Q5SQI0 421 aa11.01□□□□□ -0.65
PTPN7-208ENST00000476061 COLGALT2Q8IYK4 626 aa11.01□□□□□ -0.65
PTPN7-208ENST00000476061 GPR65Q8IYL9 337 aa11.01□□□□□ -0.65
PTPN7-208ENST00000476061 HACE1Q8IYU2 909 aa11.01□□□□□ -0.65
PTPN7-208ENST00000476061 RNF168Q8IYW5 571 aaPredicted RBP11.01□□□□□ -0.65
PTPN7-208ENST00000476061 ZDHHC14Q8IZN3 488 aa11.01□□□□□ -0.65
PTPN7-208ENST00000476061 PLCD3Q8N3E9 789 aa11.01□□□□□ -0.65
PTPN7-208ENST00000476061 FBXL6Q8N531 539 aa11.01□□□□□ -0.65
PTPN7-208ENST00000476061 ASIC4Q96FT7 647 aa11.01□□□□□ -0.65
PTPN7-208ENST00000476061 PRIMPOLQ96LW4 560 aa11.01□□□□□ -0.65
PTPN7-208ENST00000476061 FBXL18Q96ME1 805 aa11.01□□□□□ -0.65
PTPN7-208ENST00000476061 CCDC43Q96MW1 224 aaKnown RBP11.01□□□□□ -0.65
PTPN7-208ENST00000476061 KLHL5Q96PQ7 755 aa11.01□□□□□ -0.65
PTPN7-208ENST00000476061 POLR3CQ9BUI4 534 aaPredicted RBP11.01□□□□□ -0.65
PTPN7-208ENST00000476061 VN1R3Q9BXE9 311 aa11.01□□□□□ -0.65
PTPN7-208ENST00000476061 GBP3Q9H0R5 595 aa11.01□□□□□ -0.65
PTPN7-208ENST00000476061 FOXP1Q9H334 677 aaPredicted RBP11.01□□□□□ -0.65
PTPN7-208ENST00000476061 POMKQ9H5K3 350 aa11.01□□□□□ -0.65
PTPN7-208ENST00000476061 MRPL17Q9NRX2 175 aaKnown RBP11.01□□□□□ -0.65
PTPN7-208ENST00000476061 DBR1Q9UK59 544 aaKnown RBP11.01□□□□□ -0.65
PTPN7-208ENST00000476061 LIMCH1Q9UPQ0 1083 aa11.01□□□□□ -0.65
PTPN7-208ENST00000476061 GIT1Q9Y2X7 761 aa11.01□□□□□ -0.65
PTPN7-208ENST00000476061 MYO10Q9HD67 2058 aa11□□□□□ -0.65
PTPN7-208ENST00000476061 A0A1B0GUA9 196 aa11□□□□□ -0.65
PTPN7-208ENST00000476061 ARL5CA6NH57 179 aa11□□□□□ -0.65
PTPN7-208ENST00000476061 POTEMA6NI47 508 aa11□□□□□ -0.65
PTPN7-208ENST00000476061 WNT7AO00755 349 aa11□□□□□ -0.65
PTPN7-208ENST00000476061 NR1I2O75469 434 aa11□□□□□ -0.65
PTPN7-208ENST00000476061 EPCAMP16422 314 aa11□□□□□ -0.65
PTPN7-208ENST00000476061 ARF4P18085 180 aaPredicted RBP11□□□□□ -0.65
PTPN7-208ENST00000476061 CLCN4P51793 760 aa11□□□□□ -0.65
PTPN7-208ENST00000476061 NHLH1Q02575 133 aa11□□□□□ -0.65
PTPN7-208ENST00000476061 SLC27A1Q6PCB7 646 aa11□□□□□ -0.65
PTPN7-208ENST00000476061 CYP26C1Q6V0L0 522 aa11□□□□□ -0.65
PTPN7-208ENST00000476061 PPP4R3CPQ6ZMV5 832 aa11□□□□□ -0.65
PTPN7-208ENST00000476061 C15orf39Q6ZRI6 1047 aa11□□□□□ -0.65
PTPN7-208ENST00000476061 CATSPER3Q86XQ3 398 aa11□□□□□ -0.65
PTPN7-208ENST00000476061 SUGP1Q8IWZ8 645 aaKnown RBP11□□□□□ -0.65
PTPN7-208ENST00000476061 UBALD2Q8IYN6 164 aa11□□□□□ -0.65
PTPN7-208ENST00000476061 MCPH1Q8NEM0 835 aa11□□□□□ -0.65
PTPN7-208ENST00000476061 ASAP3Q8TDY4 903 aa11□□□□□ -0.65
PTPN7-208ENST00000476061 AUTS2Q8WXX7 1259 aa11□□□□□ -0.65
PTPN7-208ENST00000476061 NACC1Q96RE7 527 aa11□□□□□ -0.65
PTPN7-208ENST00000476061 HERC2P3Q9BVR0 1158 aa11□□□□□ -0.65
PTPN7-208ENST00000476061 APOL5Q9BWW9 433 aa11□□□□□ -0.65
PTPN7-208ENST00000476061 EIF2AQ9BY44 585 aaKnown RBP11□□□□□ -0.65
PTPN7-208ENST00000476061 RHOBTB2Q9BYZ6 727 aa11□□□□□ -0.65
PTPN7-208ENST00000476061 SFXN1Q9H9B4 322 aa11□□□□□ -0.65
PTPN7-208ENST00000476061 MARCH5Q9NX47 278 aa11□□□□□ -0.65
PTPN7-208ENST00000476061 DPP7Q9UHL4 492 aa11□□□□□ -0.65
PTPN7-208ENST00000476061 SORCS3Q9UPU3 1222 aa11□□□□□ -0.65
PTPN7-208ENST00000476061 C5orf42Q9H799 3197 aa11□□□□□ -0.65
PTPN7-208ENST00000476061 PAPLNO95428 1278 aa10.99□□□□□ -0.65
PTPN7-208ENST00000476061 SEC24BO95487 1268 aa10.99□□□□□ -0.65
PTPN7-208ENST00000476061 CNPP09543 421 aaKnown RBP10.99□□□□□ -0.65
PTPN7-208ENST00000476061 KLRC2P26717 231 aa10.99□□□□□ -0.65
PTPN7-208ENST00000476061 RPA1P27694 616 aa10.99□□□□□ -0.65
PTPN7-208ENST00000476061 MCM7P33993 719 aa10.99□□□□□ -0.65
PTPN7-208ENST00000476061 MLH1P40692 756 aa10.99□□□□□ -0.65
PTPN7-208ENST00000476061 TRAPPC10P48553 1259 aa10.99□□□□□ -0.65
PTPN7-208ENST00000476061 NUBP1P53384 320 aa10.99□□□□□ -0.65
PTPN7-208ENST00000476061 HMGN5P82970 282 aaKnown RBP10.99□□□□□ -0.65
PTPN7-208ENST00000476061 MTMR3Q13615 1198 aa10.99□□□□□ -0.65
PTPN7-208ENST00000476061 FAM187BQ17R55 369 aa10.99□□□□□ -0.65
PTPN7-208ENST00000476061 RARS2Q5T160 578 aaKnown RBP10.99□□□□□ -0.65
PTPN7-208ENST00000476061 CDCA2Q69YH5 1023 aaPredicted RBP10.99□□□□□ -0.65
PTPN7-208ENST00000476061 GPR149Q86SP6 731 aa10.99□□□□□ -0.65
PTPN7-208ENST00000476061 CABP7Q86V35 215 aa10.99□□□□□ -0.65
PTPN7-208ENST00000476061 GSTCDQ8NEC7 633 aa10.99□□□□□ -0.65
PTPN7-208ENST00000476061 CMASQ8NFW8 434 aaPredicted RBP10.99□□□□□ -0.65
PTPN7-208ENST00000476061 FBXO18Q8NFZ0 1043 aa10.99□□□□□ -0.65
PTPN7-208ENST00000476061 ERMNQ8TAM6 284 aa10.99□□□□□ -0.65
PTPN7-208ENST00000476061 PIGOQ8TEQ8 1089 aa10.99□□□□□ -0.65
PTPN7-208ENST00000476061 HDAC7Q8WUI4 952 aa10.99□□□□□ -0.65
PTPN7-208ENST00000476061 CPB2Q96IY4 423 aa10.99□□□□□ -0.65
PTPN7-208ENST00000476061 C8orf76Q96K31 380 aa10.99□□□□□ -0.65
PTPN7-208ENST00000476061 ZSCAN31Q96LW9 406 aaPredicted RBP10.99□□□□□ -0.65
PTPN7-208ENST00000476061 RPS6KC1Q96S38 1066 aa10.99□□□□□ -0.65
PTPN7-208ENST00000476061 GAD1Q99259 594 aa10.99□□□□□ -0.65
PTPN7-208ENST00000476061 COLEC11Q9BWP8 271 aa10.99□□□□□ -0.65
PTPN7-208ENST00000476061 TRIM6Q9C030 488 aaPredicted RBP10.99□□□□□ -0.65
PTPN7-208ENST00000476061 POLR3FQ9H1D9 316 aaPredicted RBP10.99□□□□□ -0.65
PTPN7-208ENST00000476061 TMEM60Q9H2L4 133 aa10.99□□□□□ -0.65
PTPN7-208ENST00000476061 RNF39Q9H2S5 420 aa10.99□□□□□ -0.65
PTPN7-208ENST00000476061 FZD8Q9H461 694 aa10.99□□□□□ -0.65
PTPN7-208ENST00000476061 RXFP1Q9HBX9 757 aa10.99□□□□□ -0.65
PTPN7-208ENST00000476061 PRMT7Q9NVM4 692 aaPredicted RBP10.99□□□□□ -0.65
PTPN7-208ENST00000476061 C2CD4DB7Z1M9 353 aa10.98□□□□□ -0.65
PTPN7-208ENST00000476061 MED24O75448 989 aa10.98□□□□□ -0.65
PTPN7-208ENST00000476061 URODP06132 367 aa10.98□□□□□ -0.65
PTPN7-208ENST00000476061 ADH1AP07327 375 aa10.98□□□□□ -0.65
PTPN7-208ENST00000476061 OR52Z1P0C646 297 aa10.98□□□□□ -0.65
PTPN7-208ENST00000476061 OR1G1P47890 313 aa10.98□□□□□ -0.65
PTPN7-208ENST00000476061 GLUD2P49448 558 aa10.98□□□□□ -0.65
PTPN7-208ENST00000476061 DSG1Q02413 1049 aa10.98□□□□□ -0.65
PTPN7-208ENST00000476061 GRIK3Q13003 919 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms