RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 NFRKBQ6P4R8 1299 aa13.35□□□□□ -0.27
MRPL55-227ENST00000475832 ZPBP2Q6X784 338 aa13.35□□□□□ -0.27
MRPL55-227ENST00000475832 ZNF410Q86VK4 478 aa13.35□□□□□ -0.27
MRPL55-227ENST00000475832 CNGA4Q8IV77 575 aa13.35□□□□□ -0.27
MRPL55-227ENST00000475832 TRIM59Q8IWR1 403 aa13.35□□□□□ -0.27
MRPL55-227ENST00000475832 CCDC112Q8NEF3 446 aa13.35□□□□□ -0.27
MRPL55-227ENST00000475832 ZNF397Q8NF99 534 aaPredicted RBP13.35□□□□□ -0.27
MRPL55-227ENST00000475832 DIS3LQ8TF46 1054 aaKnown RBP13.35□□□□□ -0.27
MRPL55-227ENST00000475832 GDF15Q99988 308 aa13.35□□□□□ -0.27
MRPL55-227ENST00000475832 NFKBIZQ9BYH8 718 aa13.35□□□□□ -0.27
MRPL55-227ENST00000475832 SETD4Q9NVD3 440 aa13.35□□□□□ -0.27
MRPL55-227ENST00000475832 INTS13Q9NVM9 706 aa13.35□□□□□ -0.27
MRPL55-227ENST00000475832 HSPBP1Q9NZL4 362 aa13.35□□□□□ -0.27
MRPL55-227ENST00000475832 MYH9P35579 1960 aaKnown RBP13.34□□□□□ -0.27
MRPL55-227ENST00000475832 SMIM35A0A1B0GVV1 85 aa13.34□□□□□ -0.27
MRPL55-227ENST00000475832 AKR1B15C9JRZ8 316 aaPredicted RBP13.34□□□□□ -0.27
MRPL55-227ENST00000475832 INO80B-WBP1J3KQ70 363 aa13.34□□□□□ -0.27
MRPL55-227ENST00000475832 HAS3O00219 553 aa13.34□□□□□ -0.27
MRPL55-227ENST00000475832 N4BP1O75113 896 aaKnown RBP13.34□□□□□ -0.27
MRPL55-227ENST00000475832 CABYRO75952 493 aa13.34□□□□□ -0.27
MRPL55-227ENST00000475832 AKAP3O75969 853 aa13.34□□□□□ -0.27
MRPL55-227ENST00000475832 MYCNP04198 464 aaPredicted RBP13.34□□□□□ -0.27
MRPL55-227ENST00000475832 PRKCBP05771 671 aa13.34□□□□□ -0.27
MRPL55-227ENST00000475832 APBB1IPQ7Z5R6 666 aaPredicted RBP13.34□□□□□ -0.27
MRPL55-227ENST00000475832 NECAB2Q7Z6G3 386 aa13.34□□□□□ -0.27
MRPL55-227ENST00000475832 LMBR1Q8WVP7 490 aa13.34□□□□□ -0.27
MRPL55-227ENST00000475832 NLRP7Q8WX94 980 aa13.34□□□□□ -0.27
MRPL55-227ENST00000475832 KAT2BQ92831 832 aa13.34□□□□□ -0.27
MRPL55-227ENST00000475832 CCDC51Q96ER9 411 aa13.34□□□□□ -0.27
MRPL55-227ENST00000475832 PAWRQ96IZ0 340 aaKnown RBP13.34□□□□□ -0.27
MRPL55-227ENST00000475832 ERGIC2Q96RQ1 377 aa13.34□□□□□ -0.27
MRPL55-227ENST00000475832 TCHPQ9BT92 498 aa13.34□□□□□ -0.27
MRPL55-227ENST00000475832 INO80BQ9C086 356 aaPredicted RBP13.34□□□□□ -0.27
MRPL55-227ENST00000475832 PCIF1Q9H4Z3 704 aa13.34□□□□□ -0.27
MRPL55-227ENST00000475832 PRMT7Q9NVM4 692 aaPredicted RBP13.34□□□□□ -0.27
MRPL55-227ENST00000475832 ADGRA3Q8IWK6 1321 aa13.34□□□□□ -0.27
MRPL55-227ENST00000475832 ARID2Q68CP9 1835 aa13.34□□□□□ -0.27
MRPL55-227ENST00000475832 DNM1LO00429 736 aa13.33□□□□□ -0.28
MRPL55-227ENST00000475832 PGK1P00558 417 aa13.33□□□□□ -0.28
MRPL55-227ENST00000475832 CYP2C9P11712 490 aa13.33□□□□□ -0.28
MRPL55-227ENST00000475832 TRIM21P19474 475 aaKnown RBP13.33□□□□□ -0.28
MRPL55-227ENST00000475832 CST5P28325 142 aaPredicted RBP13.33□□□□□ -0.28
MRPL55-227ENST00000475832 PBX1P40424 430 aa13.33□□□□□ -0.28
MRPL55-227ENST00000475832 PTENP60484 403 aa13.33□□□□□ -0.28
MRPL55-227ENST00000475832 ENPEPQ07075 957 aa13.33□□□□□ -0.28
MRPL55-227ENST00000475832 KCNH2Q12809 1159 aa13.33□□□□□ -0.28
MRPL55-227ENST00000475832 MKRN4PQ13434 485 aaPredicted RBP13.33□□□□□ -0.28
MRPL55-227ENST00000475832 DRP2Q13474 957 aa13.33□□□□□ -0.28
MRPL55-227ENST00000475832 PRPF4BQ13523 1007 aaKnown RBP13.33□□□□□ -0.28
MRPL55-227ENST00000475832 SYCP1Q15431 976 aa13.33□□□□□ -0.28
MRPL55-227ENST00000475832 MIIPQ5JXC2 388 aa13.33□□□□□ -0.28
MRPL55-227ENST00000475832 SRGAP1Q7Z6B7 1085 aa13.33□□□□□ -0.28
MRPL55-227ENST00000475832 RSPH3Q86UC2 560 aa13.33□□□□□ -0.28
MRPL55-227ENST00000475832 ZSCAN30Q86W11 494 aa13.33□□□□□ -0.28
MRPL55-227ENST00000475832 TDHQ8IZJ6 230 aa13.33□□□□□ -0.28
MRPL55-227ENST00000475832 GPD1LQ8N335 351 aa13.33□□□□□ -0.28
MRPL55-227ENST00000475832 NME8Q8N427 588 aa13.33□□□□□ -0.28
MRPL55-227ENST00000475832 NEK11Q8NG66 645 aa13.33□□□□□ -0.28
MRPL55-227ENST00000475832 PRIMPOLQ96LW4 560 aa13.33□□□□□ -0.28
MRPL55-227ENST00000475832 CBWD1Q9BRT8 395 aa13.33□□□□□ -0.28
MRPL55-227ENST00000475832 GCOM2Q9BZD3 368 aaPredicted RBP13.33□□□□□ -0.28
MRPL55-227ENST00000475832 ZNF233A6NK53 670 aa13.32□□□□□ -0.28
MRPL55-227ENST00000475832 ANKRD63C9JTQ0 380 aa13.32□□□□□ -0.28
MRPL55-227ENST00000475832 M0QZ92 97 aa13.32□□□□□ -0.28
MRPL55-227ENST00000475832 ACKR2O00590 384 aa13.32□□□□□ -0.28
MRPL55-227ENST00000475832 CLDN3O15551 220 aa13.32□□□□□ -0.28
MRPL55-227ENST00000475832 EXTL3O43909 919 aa13.32□□□□□ -0.28
MRPL55-227ENST00000475832 TOM1L1O75674 476 aa13.32□□□□□ -0.28
MRPL55-227ENST00000475832 CASP4P49662 377 aa13.32□□□□□ -0.28
MRPL55-227ENST00000475832 VAMP7P51809 220 aa13.32□□□□□ -0.28
MRPL55-227ENST00000475832 BFSP1Q12934 665 aa13.32□□□□□ -0.28
MRPL55-227ENST00000475832 TBX2Q13207 712 aaPredicted RBP13.32□□□□□ -0.28
MRPL55-227ENST00000475832 PCBP1Q15365 356 aaKnown RBP eCLIP13.32□□□□□ -0.28
MRPL55-227ENST00000475832 SNRNP35Q16560 246 aaKnown RBP13.32□□□□□ -0.28
MRPL55-227ENST00000475832 TAF2Q6P1X5 1199 aa13.32□□□□□ -0.28
MRPL55-227ENST00000475832 IFNLR1Q8IU57 520 aaPredicted RBP13.32□□□□□ -0.28
MRPL55-227ENST00000475832 LRRC8AQ8IWT6 810 aa13.32□□□□□ -0.28
MRPL55-227ENST00000475832 LINC01465Q8N7H1 131 aa13.32□□□□□ -0.28
MRPL55-227ENST00000475832 RDH13Q8NBN7 331 aa13.32□□□□□ -0.28
MRPL55-227ENST00000475832 ARRDC4Q8NCT1 418 aa13.32□□□□□ -0.28
MRPL55-227ENST00000475832 VTI1AQ96AJ9 217 aa13.32□□□□□ -0.28
MRPL55-227ENST00000475832 FAM122AQ96E09 287 aa13.32□□□□□ -0.28
MRPL55-227ENST00000475832 MSTO1Q9BUK6 570 aa13.32□□□□□ -0.28
MRPL55-227ENST00000475832 MMRN2Q9H8L6 949 aa13.32□□□□□ -0.28
MRPL55-227ENST00000475832 ZNHIT6Q9NWK9 470 aaKnown RBP13.32□□□□□ -0.28
MRPL55-227ENST00000475832 AGO2Q9UKV8 859 aaKnown RBP13.32□□□□□ -0.28
MRPL55-227ENST00000475832 STYXL1Q9Y6J8 313 aa13.32□□□□□ -0.28
MRPL55-227ENST00000475832 A0A087WZ62 844 aa13.31□□□□□ -0.28
MRPL55-227ENST00000475832 GTPBP10A4D1E9 387 aaKnown RBP13.31□□□□□ -0.28
MRPL55-227ENST00000475832 MBLAC1A4D2B0 266 aaPredicted RBP13.31□□□□□ -0.28
MRPL55-227ENST00000475832 TULP1O00294 542 aaPredicted RBP13.31□□□□□ -0.28
MRPL55-227ENST00000475832 ADAMTS4O75173 837 aa13.31□□□□□ -0.28
MRPL55-227ENST00000475832 ERLIN2O94905 339 aa13.31□□□□□ -0.28
MRPL55-227ENST00000475832 PLA2G5P39877 138 aa13.31□□□□□ -0.28
MRPL55-227ENST00000475832 KYAT1Q16773 422 aa13.31□□□□□ -0.28
MRPL55-227ENST00000475832 FAM47CQ5HY64 1035 aa13.31□□□□□ -0.28
MRPL55-227ENST00000475832 FIGNQ5HY92 759 aa13.31□□□□□ -0.28
MRPL55-227ENST00000475832 MARCH8Q5T0T0 291 aa13.31□□□□□ -0.28
MRPL55-227ENST00000475832 CXCL17Q6UXB2 119 aa13.31□□□□□ -0.28
MRPL55-227ENST00000475832 GBP6Q6ZN66 633 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms