RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 PLS3P13797 630 aa7.72□□□□□ -1.17
LIMD1-204ENST00000474665 HOXA11P31270 313 aaPredicted RBP7.72□□□□□ -1.17
LIMD1-204ENST00000474665 RFC2P35250 354 aa7.72□□□□□ -1.17
LIMD1-204ENST00000474665 AFMP43652 599 aa7.72□□□□□ -1.17
LIMD1-204ENST00000474665 DNM2P50570 870 aa7.72□□□□□ -1.17
LIMD1-204ENST00000474665 FAM160A1Q05DH4 1040 aa7.72□□□□□ -1.17
LIMD1-204ENST00000474665 POU5F1BQ06416 359 aa7.72□□□□□ -1.17
LIMD1-204ENST00000474665 DSC3Q14574 896 aa7.72□□□□□ -1.17
LIMD1-204ENST00000474665 MXD4Q14582 209 aaPredicted RBP7.72□□□□□ -1.17
LIMD1-204ENST00000474665 PUS10Q3MIT2 529 aaKnown RBP7.72□□□□□ -1.17
LIMD1-204ENST00000474665 TSHZ1Q6ZSZ6 1077 aa7.72□□□□□ -1.17
LIMD1-204ENST00000474665 DYMQ7RTS9 669 aa7.72□□□□□ -1.17
LIMD1-204ENST00000474665 ZNF410Q86VK4 478 aa7.72□□□□□ -1.17
LIMD1-204ENST00000474665 RNF135Q8IUD6 432 aa7.72□□□□□ -1.17
LIMD1-204ENST00000474665 ADHFE1Q8IWW8 467 aa7.72□□□□□ -1.17
LIMD1-204ENST00000474665 FBXL6Q8N531 539 aa7.72□□□□□ -1.17
LIMD1-204ENST00000474665 TMEM161BQ8NDZ6 487 aa7.72□□□□□ -1.17
LIMD1-204ENST00000474665 GLIS3Q8NEA6 775 aa7.72□□□□□ -1.17
LIMD1-204ENST00000474665 SPIRE2Q8WWL2 714 aa7.72□□□□□ -1.17
LIMD1-204ENST00000474665 TCP11Q8WWU5 503 aa7.72□□□□□ -1.17
LIMD1-204ENST00000474665 NLRP7Q8WX94 980 aa7.72□□□□□ -1.17
LIMD1-204ENST00000474665 KIFAP3Q92845 792 aa7.72□□□□□ -1.17
LIMD1-204ENST00000474665 KCNN1Q92952 543 aa7.72□□□□□ -1.17
LIMD1-204ENST00000474665 HPS3Q969F9 1004 aa7.72□□□□□ -1.17
LIMD1-204ENST00000474665 CCDC43Q96MW1 224 aaKnown RBP7.72□□□□□ -1.17
LIMD1-204ENST00000474665 C7orf25Q9BPX7 421 aa7.72□□□□□ -1.17
LIMD1-204ENST00000474665 STRA6Q9BX79 667 aa7.72□□□□□ -1.17
LIMD1-204ENST00000474665 NFKBIZQ9BYH8 718 aa7.72□□□□□ -1.17
LIMD1-204ENST00000474665 IRF2BPLQ9H1B7 796 aa7.72□□□□□ -1.17
LIMD1-204ENST00000474665 BLZF1Q9H2G9 400 aa7.72□□□□□ -1.17
LIMD1-204ENST00000474665 TNMDQ9H2S6 317 aa7.72□□□□□ -1.17
LIMD1-204ENST00000474665 FZD8Q9H461 694 aa7.72□□□□□ -1.17
LIMD1-204ENST00000474665 CUEDC2Q9H467 287 aa7.72□□□□□ -1.17
LIMD1-204ENST00000474665 ST3GAL5Q9UNP4 418 aa7.72□□□□□ -1.17
LIMD1-204ENST00000474665 ATRXP46100 2492 aa7.71□□□□□ -1.17
LIMD1-204ENST00000474665 RIF1Q5UIP0 2472 aaKnown RBP7.71□□□□□ -1.17
LIMD1-204ENST00000474665 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.71□□□□□ -1.18
LIMD1-204ENST00000474665 LRRIQ4A6NIV6 560 aa7.71□□□□□ -1.18
LIMD1-204ENST00000474665 SLC16A4O15374 487 aa7.71□□□□□ -1.18
LIMD1-204ENST00000474665 TSPAN1O60635 241 aa7.71□□□□□ -1.18
LIMD1-204ENST00000474665 PPP1R37O75864 691 aa7.71□□□□□ -1.18
LIMD1-204ENST00000474665 PARNO95453 639 aaKnown RBP7.71□□□□□ -1.18
LIMD1-204ENST00000474665 MAPTP10636 758 aaKnown RBP7.71□□□□□ -1.18
LIMD1-204ENST00000474665 NMT1P30419 496 aaKnown RBP7.71□□□□□ -1.18
LIMD1-204ENST00000474665 AVPR2P30518 371 aa7.71□□□□□ -1.18
LIMD1-204ENST00000474665 HOXD13P35453 343 aa7.71□□□□□ -1.18
LIMD1-204ENST00000474665 NAMPTP43490 491 aa7.71□□□□□ -1.18
LIMD1-204ENST00000474665 CASP5P51878 434 aa7.71□□□□□ -1.18
LIMD1-204ENST00000474665 PEX3P56589 373 aa7.71□□□□□ -1.18
LIMD1-204ENST00000474665 UBE2HP62256 183 aa7.71□□□□□ -1.18
LIMD1-204ENST00000474665 CDC42EP1Q00587 391 aa7.71□□□□□ -1.18
LIMD1-204ENST00000474665 KCNA1Q09470 495 aa7.71□□□□□ -1.18
LIMD1-204ENST00000474665 DPYDQ12882 1025 aa7.71□□□□□ -1.18
LIMD1-204ENST00000474665 NT5DC1Q5TFE4 455 aa7.71□□□□□ -1.18
LIMD1-204ENST00000474665 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.71□□□□□ -1.18
LIMD1-204ENST00000474665 EP400NLQ6ZTU2 488 aa7.71□□□□□ -1.18
LIMD1-204ENST00000474665 TMCO2Q7Z6W1 182 aaPredicted RBP7.71□□□□□ -1.18
LIMD1-204ENST00000474665 SFR1Q86XK3 245 aa7.71□□□□□ -1.18
LIMD1-204ENST00000474665 RPUSD2Q8IZ73 545 aaKnown RBP7.71□□□□□ -1.18
LIMD1-204ENST00000474665 ZNF710Q8N1W2 664 aa7.71□□□□□ -1.18
LIMD1-204ENST00000474665 GPT2Q8TD30 523 aa7.71□□□□□ -1.18
LIMD1-204ENST00000474665 ERCC4Q92889 916 aaPredicted RBP7.71□□□□□ -1.18
LIMD1-204ENST00000474665 DRC1Q96MC2 740 aa7.71□□□□□ -1.18
LIMD1-204ENST00000474665 TIPINQ9BVW5 301 aa7.71□□□□□ -1.18
LIMD1-204ENST00000474665 IFIH1Q9BYX4 1025 aaKnown RBP7.71□□□□□ -1.18
LIMD1-204ENST00000474665 GCOM2Q9BZD3 368 aaPredicted RBP7.71□□□□□ -1.18
LIMD1-204ENST00000474665 IKZF4Q9H2S9 585 aa7.71□□□□□ -1.18
LIMD1-204ENST00000474665 MAGEF1Q9HAY2 307 aa7.71□□□□□ -1.18
LIMD1-204ENST00000474665 LMCD1Q9NZU5 365 aa7.71□□□□□ -1.18
LIMD1-204ENST00000474665 PRKAG3Q9UGI9 489 aa7.71□□□□□ -1.18
LIMD1-204ENST00000474665 USP25Q9UHP3 1055 aa7.71□□□□□ -1.18
LIMD1-204ENST00000474665 MTUS1Q9ULD2 1270 aa7.71□□□□□ -1.18
LIMD1-204ENST00000474665 ODF2LQ9ULJ1 636 aa7.71□□□□□ -1.18
LIMD1-204ENST00000474665 NCOR2Q9Y618 2525 aa7.71□□□□□ -1.18
LIMD1-204ENST00000474665 FNDC1Q4ZHG4 1894 aaPredicted RBP7.7□□□□□ -1.18
LIMD1-204ENST00000474665 CITO14578 2027 aa7.7□□□□□ -1.18
LIMD1-204ENST00000474665 LCHNA4D1U4 455 aa7.7□□□□□ -1.18
LIMD1-204ENST00000474665 GOLGA6L4A6NEF3 574 aa7.7□□□□□ -1.18
LIMD1-204ENST00000474665 CCDC169A6NNP5 214 aa7.7□□□□□ -1.18
LIMD1-204ENST00000474665 C9IYK1 514 aa7.7□□□□□ -1.18
LIMD1-204ENST00000474665 M0QZ92 97 aa7.7□□□□□ -1.18
LIMD1-204ENST00000474665 ENPP3O14638 875 aa7.7□□□□□ -1.18
LIMD1-204ENST00000474665 ABLIM1O14639 778 aa7.7□□□□□ -1.18
LIMD1-204ENST00000474665 RPS6KA5O75582 802 aa7.7□□□□□ -1.18
LIMD1-204ENST00000474665 HOXB3P14651 431 aaPredicted RBP7.7□□□□□ -1.18
LIMD1-204ENST00000474665 ATF7P17544 494 aaPredicted RBP7.7□□□□□ -1.18
LIMD1-204ENST00000474665 ARF4P18085 180 aaPredicted RBP7.7□□□□□ -1.18
LIMD1-204ENST00000474665 PHKA2P46019 1235 aa7.7□□□□□ -1.18
LIMD1-204ENST00000474665 NCKAP1LP55160 1127 aa7.7□□□□□ -1.18
LIMD1-204ENST00000474665 FAM189BP81408 668 aa7.7□□□□□ -1.18
LIMD1-204ENST00000474665 DEFB103AP81534 67 aa7.7□□□□□ -1.18
LIMD1-204ENST00000474665 NFX1Q12986 1120 aaKnown RBP7.7□□□□□ -1.18
LIMD1-204ENST00000474665 COASYQ13057 564 aa7.7□□□□□ -1.18
LIMD1-204ENST00000474665 DMP1Q13316 513 aaPredicted RBP7.7□□□□□ -1.18
LIMD1-204ENST00000474665 PNOCQ13519 176 aa7.7□□□□□ -1.18
LIMD1-204ENST00000474665 ST3GAL2Q16842 350 aa7.7□□□□□ -1.18
LIMD1-204ENST00000474665 FAM187BQ17R55 369 aa7.7□□□□□ -1.18
LIMD1-204ENST00000474665 ZC2HC1CQ53FD0 456 aaPredicted RBP7.7□□□□□ -1.18
LIMD1-204ENST00000474665 ODR4Q5SWX8 454 aa7.7□□□□□ -1.18
LIMD1-204ENST00000474665 UBXN11Q5T124 520 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms