RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 PQBP1O60828 265 aaKnown RBP5.26□□□□□ -1.57
BRCA1-212ENST00000473961 SEC24DO94855 1032 aaPredicted RBP5.26□□□□□ -1.57
BRCA1-212ENST00000473961 FTLP02792 175 aaPredicted RBP5.26□□□□□ -1.57
BRCA1-212ENST00000473961 CELA3BP08861 270 aa5.26□□□□□ -1.57
BRCA1-212ENST00000473961 GSPT1P15170 499 aaKnown RBP5.26□□□□□ -1.57
BRCA1-212ENST00000473961 SESN2P58004 480 aaPredicted RBP5.26□□□□□ -1.57
BRCA1-212ENST00000473961 MGAT5Q09328 741 aa5.26□□□□□ -1.57
BRCA1-212ENST00000473961 LLGL1Q15334 1064 aa5.26□□□□□ -1.57
BRCA1-212ENST00000473961 ZXDCQ2QGD7 858 aaPredicted RBP5.26□□□□□ -1.57
BRCA1-212ENST00000473961 WDR72Q3MJ13 1102 aa5.26□□□□□ -1.57
BRCA1-212ENST00000473961 C4orf46Q504U0 113 aa5.26□□□□□ -1.57
BRCA1-212ENST00000473961 C10orf62Q5T681 223 aaPredicted RBP5.26□□□□□ -1.57
BRCA1-212ENST00000473961 RNF220Q5VTB9 566 aa5.26□□□□□ -1.57
BRCA1-212ENST00000473961 CYB5RLQ6IPT4 315 aa5.26□□□□□ -1.57
BRCA1-212ENST00000473961 LRSAM1Q6UWE0 723 aa5.26□□□□□ -1.57
BRCA1-212ENST00000473961 TOGARAM2Q6ZUX3 1019 aa5.26□□□□□ -1.57
BRCA1-212ENST00000473961 SRLQ86TD4 932 aa5.26□□□□□ -1.57
BRCA1-212ENST00000473961 LYSMD2Q8IV50 215 aa5.26□□□□□ -1.57
BRCA1-212ENST00000473961 EPB41L4AQ9HCS5 686 aaPredicted RBP5.26□□□□□ -1.57
BRCA1-212ENST00000473961 PLCB1Q9NQ66 1216 aa5.26□□□□□ -1.57
BRCA1-212ENST00000473961 SIRT5Q9NXA8 310 aa5.26□□□□□ -1.57
BRCA1-212ENST00000473961 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.26□□□□□ -1.57
BRCA1-212ENST00000473961 TAGLN3Q9UI15 199 aa5.26□□□□□ -1.57
BRCA1-212ENST00000473961 ZFP69BQ9UJL9 534 aa5.26□□□□□ -1.57
BRCA1-212ENST00000473961 L1RE1Q9UN81 338 aa5.26□□□□□ -1.57
BRCA1-212ENST00000473961 DAAM1Q9Y4D1 1078 aa5.26□□□□□ -1.57
BRCA1-212ENST00000473961 IPPQ9Y573 584 aa5.26□□□□□ -1.57
BRCA1-212ENST00000473961 RPTORQ8N122 1335 aa5.25□□□□□ -1.57
BRCA1-212ENST00000473961 PEX2P28328 305 aa5.25□□□□□ -1.57
BRCA1-212ENST00000473961 ECHS1P30084 290 aa5.25□□□□□ -1.57
BRCA1-212ENST00000473961 AGFG1P52594 562 aaKnown RBP5.25□□□□□ -1.57
BRCA1-212ENST00000473961 IL13RA1P78552 427 aa5.25□□□□□ -1.57
BRCA1-212ENST00000473961 SEMA5AQ13591 1074 aa5.25□□□□□ -1.57
BRCA1-212ENST00000473961 GALEQ14376 348 aa5.25□□□□□ -1.57
BRCA1-212ENST00000473961 POLD3Q15054 466 aaPredicted RBP5.25□□□□□ -1.57
BRCA1-212ENST00000473961 NOMO1Q15155 1222 aa5.25□□□□□ -1.57
BRCA1-212ENST00000473961 LONRF1Q17RB8 773 aa5.25□□□□□ -1.57
BRCA1-212ENST00000473961 KANK2Q63ZY3 851 aa5.25□□□□□ -1.57
BRCA1-212ENST00000473961 NPNTQ6UXI9 565 aa5.25□□□□□ -1.57
BRCA1-212ENST00000473961 LIPIQ6XZB0 460 aa5.25□□□□□ -1.57
BRCA1-212ENST00000473961 GAREM2Q75VX8 874 aa5.25□□□□□ -1.57
BRCA1-212ENST00000473961 PROSER1Q86XN7 944 aa5.25□□□□□ -1.57
BRCA1-212ENST00000473961 MYLK4Q86YV6 388 aaPredicted RBP5.25□□□□□ -1.57
BRCA1-212ENST00000473961 KIAA0319LQ8IZA0 1049 aa5.25□□□□□ -1.57
BRCA1-212ENST00000473961 IFNL2Q8IZJ0 200 aa5.25□□□□□ -1.57
BRCA1-212ENST00000473961 FAM9AQ8IZU1 332 aaPredicted RBP5.25□□□□□ -1.57
BRCA1-212ENST00000473961 TTLL6Q8N841 843 aa5.25□□□□□ -1.57
BRCA1-212ENST00000473961 GPR156Q8NFN8 814 aa5.25□□□□□ -1.57
BRCA1-212ENST00000473961 PPP1R35Q8TAP8 253 aa5.25□□□□□ -1.57
BRCA1-212ENST00000473961 ZNF526Q8TF50 670 aaPredicted RBP5.25□□□□□ -1.57
BRCA1-212ENST00000473961 LRTOMTQ8WZ04 291 aa5.25□□□□□ -1.57
BRCA1-212ENST00000473961 KCNN1Q92952 543 aa5.25□□□□□ -1.57
BRCA1-212ENST00000473961 PGBD4Q96DM1 585 aa5.25□□□□□ -1.57
BRCA1-212ENST00000473961 CYFIP2Q96F07 1278 aa5.25□□□□□ -1.57
BRCA1-212ENST00000473961 WDR92Q96MX6 357 aa5.25□□□□□ -1.57
BRCA1-212ENST00000473961 CGRRF1Q99675 332 aa5.25□□□□□ -1.57
BRCA1-212ENST00000473961 TACO1Q9BSH4 297 aaKnown RBP5.25□□□□□ -1.57
BRCA1-212ENST00000473961 LRRC27Q9C0I9 530 aa5.25□□□□□ -1.57
BRCA1-212ENST00000473961 HAPLN2Q9GZV7 340 aa5.25□□□□□ -1.57
BRCA1-212ENST00000473961 XYLT2Q9H1B5 865 aa5.25□□□□□ -1.57
BRCA1-212ENST00000473961 PRDM12Q9H4Q4 367 aa5.25□□□□□ -1.57
BRCA1-212ENST00000473961 CNNM1Q9NRU3 951 aa5.25□□□□□ -1.57
BRCA1-212ENST00000473961 TDP1Q9NUW8 608 aa5.25□□□□□ -1.57
BRCA1-212ENST00000473961 SCOCQ9UIL1 159 aa5.25□□□□□ -1.57
BRCA1-212ENST00000473961 LIMCH1Q9UPQ0 1083 aa5.25□□□□□ -1.57
BRCA1-212ENST00000473961 DMTF1Q9Y222 760 aa5.25□□□□□ -1.57
BRCA1-212ENST00000473961 HCFC2Q9Y5Z7 792 aa5.25□□□□□ -1.57
BRCA1-212ENST00000473961 A0A0G2JNJ9 132 aa5.24□□□□□ -1.57
BRCA1-212ENST00000473961 CFAP69A5D8W1 941 aa5.24□□□□□ -1.57
BRCA1-212ENST00000473961 HMGB1P1B2RPK0 211 aaPredicted RBP5.24□□□□□ -1.57
BRCA1-212ENST00000473961 AKR1B10O60218 316 aa5.24□□□□□ -1.57
BRCA1-212ENST00000473961 ALDH2P05091 517 aa5.24□□□□□ -1.57
BRCA1-212ENST00000473961 SETSIPP0DME0 302 aa5.24□□□□□ -1.57
BRCA1-212ENST00000473961 MYBP10242 640 aa5.24□□□□□ -1.57
BRCA1-212ENST00000473961 GLRBP48167 497 aa5.24□□□□□ -1.57
BRCA1-212ENST00000473961 PER3P56645 1201 aa5.24□□□□□ -1.57
BRCA1-212ENST00000473961 CD83Q01151 205 aa5.24□□□□□ -1.57
BRCA1-212ENST00000473961 KRT72Q14CN4 511 aa5.24□□□□□ -1.57
BRCA1-212ENST00000473961 CNN3Q15417 329 aaKnown RBP5.24□□□□□ -1.57
BRCA1-212ENST00000473961 C1orf228Q6PIY5 440 aa5.24□□□□□ -1.57
BRCA1-212ENST00000473961 MAEAQ7L5Y9 396 aa5.24□□□□□ -1.57
BRCA1-212ENST00000473961 FAM129CQ86XR2 697 aa5.24□□□□□ -1.57
BRCA1-212ENST00000473961 RHOT1Q8IXI2 618 aa5.24□□□□□ -1.57
BRCA1-212ENST00000473961 KRT78Q8N1N4 520 aa5.24□□□□□ -1.57
BRCA1-212ENST00000473961 C3orf20Q8ND61 904 aa5.24□□□□□ -1.57
BRCA1-212ENST00000473961 KLHDC4Q8TBB5 520 aa5.24□□□□□ -1.57
BRCA1-212ENST00000473961 PPM1EQ8WY54 764 aa5.24□□□□□ -1.57
BRCA1-212ENST00000473961 RIN2Q8WYP3 895 aaPredicted RBP5.24□□□□□ -1.57
BRCA1-212ENST00000473961 GFM2Q969S9 779 aaKnown RBP5.24□□□□□ -1.57
BRCA1-212ENST00000473961 BCAS3Q9H6U6 928 aa5.24□□□□□ -1.57
BRCA1-212ENST00000473961 ZNF552Q9H707 407 aaPredicted RBP5.24□□□□□ -1.57
BRCA1-212ENST00000473961 Q9UFV3 132 aa5.24□□□□□ -1.57
BRCA1-212ENST00000473961 VWA7Q9Y334 891 aa5.24□□□□□ -1.57
BRCA1-212ENST00000473961 A6NNZ2 444 aa5.23□□□□□ -1.57
BRCA1-212ENST00000473961 H0Y858 1186 aa5.23□□□□□ -1.57
BRCA1-212ENST00000473961 FRS3O43559 492 aa5.23□□□□□ -1.57
BRCA1-212ENST00000473961 PRAMEF4O60810 478 aa5.23□□□□□ -1.57
BRCA1-212ENST00000473961 TCEA3O75764 348 aa5.23□□□□□ -1.57
BRCA1-212ENST00000473961 C8BP07358 591 aa5.23□□□□□ -1.57
BRCA1-212ENST00000473961 MYL3P08590 195 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms