RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 WDR91A4D1P6 747 aa3.27□□□□□ -1.89
CCDC39-203ENST00000473854 LRRC3CA6NJW4 275 aa3.27□□□□□ -1.89
CCDC39-203ENST00000473854 MARCH11A6NNE9 402 aa3.27□□□□□ -1.89
CCDC39-203ENST00000473854 B5MCH6 92 aa3.27□□□□□ -1.89
CCDC39-203ENST00000473854 LEFTY2O00292 366 aa3.27□□□□□ -1.89
CCDC39-203ENST00000473854 ALDH1A2O94788 518 aa3.27□□□□□ -1.89
CCDC39-203ENST00000473854 CYP17A1P05093 508 aa3.27□□□□□ -1.89
CCDC39-203ENST00000473854 MRPS35P82673 323 aaKnown RBP3.27□□□□□ -1.89
CCDC39-203ENST00000473854 ADCY1Q08828 1119 aa3.27□□□□□ -1.89
CCDC39-203ENST00000473854 RESTQ13127 1097 aa3.27□□□□□ -1.89
CCDC39-203ENST00000473854 SRSF7Q16629 238 aaKnown RBP eCLIP3.27□□□□□ -1.89
CCDC39-203ENST00000473854 FOXB2Q5VYV0 432 aa3.27□□□□□ -1.89
CCDC39-203ENST00000473854 FSTL4Q6MZW2 842 aa3.27□□□□□ -1.89
CCDC39-203ENST00000473854 Q6ZNX1 250 aa3.27□□□□□ -1.89
CCDC39-203ENST00000473854 OVCH1Q7RTY7 1134 aa3.27□□□□□ -1.89
CCDC39-203ENST00000473854 GPRIN1Q7Z2K8 1008 aa3.27□□□□□ -1.89
CCDC39-203ENST00000473854 CELF2-AS1Q8N7Q2 184 aa3.27□□□□□ -1.89
CCDC39-203ENST00000473854 PDPRQ8NCN5 879 aa3.27□□□□□ -1.89
CCDC39-203ENST00000473854 OR10H5Q8NGA6 315 aa3.27□□□□□ -1.89
CCDC39-203ENST00000473854 FCRL4Q96PJ5 515 aa3.27□□□□□ -1.89
CCDC39-203ENST00000473854 SPON1Q9HCB6 807 aa3.27□□□□□ -1.89
CCDC39-203ENST00000473854 COQ6Q9Y2Z9 468 aa3.27□□□□□ -1.89
CCDC39-203ENST00000473854 TNPO3Q9Y5L0 923 aaKnown RBP3.27□□□□□ -1.89
CCDC39-203ENST00000473854 ORC4O43929 436 aa3.26□□□□□ -1.89
CCDC39-203ENST00000473854 IGKV2-30P06310 120 aa3.26□□□□□ -1.89
CCDC39-203ENST00000473854 GAAP10253 952 aa3.26□□□□□ -1.89
CCDC39-203ENST00000473854 DUSP2Q05923 314 aa3.26□□□□□ -1.89
CCDC39-203ENST00000473854 PDCD4Q53EL6 469 aaKnown RBP3.26□□□□□ -1.89
CCDC39-203ENST00000473854 TIGD7Q6NT04 549 aaPredicted RBP3.26□□□□□ -1.89
CCDC39-203ENST00000473854 ZNF788Q6ZQV5 615 aa3.26□□□□□ -1.89
CCDC39-203ENST00000473854 OTOP1Q7RTM1 612 aa3.26□□□□□ -1.89
CCDC39-203ENST00000473854 HNRNPLLQ8WVV9 542 aaKnown RBP3.26□□□□□ -1.89
CCDC39-203ENST00000473854 ZBTB9Q96C00 473 aa3.26□□□□□ -1.89
CCDC39-203ENST00000473854 MAGEB10Q96LZ2 347 aaPredicted RBP3.26□□□□□ -1.89
CCDC39-203ENST00000473854 PCIF1Q9H4Z3 704 aa3.26□□□□□ -1.89
CCDC39-203ENST00000473854 TBCCD1Q9NVR7 557 aa3.26□□□□□ -1.89
CCDC39-203ENST00000473854 ING3Q9NXR8 418 aa3.26□□□□□ -1.89
CCDC39-203ENST00000473854 NOX1Q9Y5S8 564 aa3.26□□□□□ -1.89
CCDC39-203ENST00000473854 CCKBRP32239 447 aa3.25□□□□□ -1.89
CCDC39-203ENST00000473854 CASRP41180 1078 aa3.25□□□□□ -1.89
CCDC39-203ENST00000473854 KIF11P52732 1056 aa3.25□□□□□ -1.89
CCDC39-203ENST00000473854 PTTG1IPP53801 180 aa3.25□□□□□ -1.89
CCDC39-203ENST00000473854 ADCY2Q08462 1091 aa3.25□□□□□ -1.89
CCDC39-203ENST00000473854 EPHA7Q15375 998 aa3.25□□□□□ -1.89
CCDC39-203ENST00000473854 EFCAB12Q6NXP0 572 aa3.25□□□□□ -1.89
CCDC39-203ENST00000473854 ACTRT2Q8TDY3 377 aa3.25□□□□□ -1.89
CCDC39-203ENST00000473854 Q96MF0 132 aa3.25□□□□□ -1.89
CCDC39-203ENST00000473854 UROC1Q96N76 676 aa3.25□□□□□ -1.89
CCDC39-203ENST00000473854 KLK15Q9H2R5 256 aa3.25□□□□□ -1.89
CCDC39-203ENST00000473854 ARPP21Q9UBL0 812 aaPredicted RBP3.25□□□□□ -1.89
CCDC39-203ENST00000473854 DMTF1Q9Y222 760 aa3.25□□□□□ -1.89
CCDC39-203ENST00000473854 ZNF804BA4D1E1 1349 aa3.24□□□□□ -1.89
CCDC39-203ENST00000473854 DIAPH1O60610 1272 aaKnown RBP3.24□□□□□ -1.89
CCDC39-203ENST00000473854 OPHN1O60890 802 aa3.24□□□□□ -1.89
CCDC39-203ENST00000473854 CFIP05156 583 aa3.24□□□□□ -1.89
CCDC39-203ENST00000473854 CELA2AP08217 269 aa3.24□□□□□ -1.89
CCDC39-203ENST00000473854 FGRP09769 529 aa3.24□□□□□ -1.89
CCDC39-203ENST00000473854 ZBTB48P10074 688 aaPredicted RBP3.24□□□□□ -1.89
CCDC39-203ENST00000473854 CCT4P50991 539 aaKnown RBP3.24□□□□□ -1.89
CCDC39-203ENST00000473854 LONRF2Q1L5Z9 754 aa3.24□□□□□ -1.89
CCDC39-203ENST00000473854 TMEM177Q53S58 311 aa3.24□□□□□ -1.89
CCDC39-203ENST00000473854 ZC3H12BQ5HYM0 836 aaKnown RBP3.24□□□□□ -1.89
CCDC39-203ENST00000473854 AKNAD1Q5T1N1 836 aa3.24□□□□□ -1.89
CCDC39-203ENST00000473854 ZNF517Q6ZMY9 492 aaPredicted RBP3.24□□□□□ -1.89
CCDC39-203ENST00000473854 SYT12Q8IV01 421 aa3.24□□□□□ -1.89
CCDC39-203ENST00000473854 C7orf31Q8N865 590 aa3.24□□□□□ -1.89
CCDC39-203ENST00000473854 ZBTB38Q8NAP3 1195 aaPredicted RBP3.24□□□□□ -1.89
CCDC39-203ENST00000473854 PPP1R14CQ8TAE6 165 aa3.24□□□□□ -1.89
CCDC39-203ENST00000473854 HASPINQ8TF76 798 aa3.24□□□□□ -1.89
CCDC39-203ENST00000473854 FUBP1Q96AE4 644 aaKnown RBP3.24□□□□□ -1.89
CCDC39-203ENST00000473854 PDLIM2Q96JY6 352 aa3.24□□□□□ -1.89
CCDC39-203ENST00000473854 NOL10Q9BSC4 688 aaKnown RBP3.24□□□□□ -1.89
CCDC39-203ENST00000473854 HIRIP3Q9BW71 556 aaPredicted RBP3.24□□□□□ -1.89
CCDC39-203ENST00000473854 MTG2Q9H4K7 406 aa3.24□□□□□ -1.89
CCDC39-203ENST00000473854 FOXJ2Q9P0K8 574 aa3.24□□□□□ -1.89
CCDC39-203ENST00000473854 POGKQ9P215 609 aa3.24□□□□□ -1.89
CCDC39-203ENST00000473854 ATP11BQ9Y2G3 1177 aa3.24□□□□□ -1.89
CCDC39-203ENST00000473854 ADCY3O60266 1144 aa3.23□□□□□ -1.89
CCDC39-203ENST00000473854 ARID5AQ03989 594 aa3.23□□□□□ -1.89
CCDC39-203ENST00000473854 FAM209AQ5JX71 171 aa3.23□□□□□ -1.89
CCDC39-203ENST00000473854 KANSL1Q7Z3B3 1105 aa3.23□□□□□ -1.89
CCDC39-203ENST00000473854 PHYKPLQ8IUZ5 450 aa3.23□□□□□ -1.89
CCDC39-203ENST00000473854 DHRS4Q9BTZ2 278 aa3.23□□□□□ -1.89
CCDC39-203ENST00000473854 CASS4Q9NQ75 786 aa3.23□□□□□ -1.89
CCDC39-203ENST00000473854 USP15Q9Y4E8 981 aaPredicted RBP3.23□□□□□ -1.89
CCDC39-203ENST00000473854 MGST3O14880 152 aa3.22□□□□□ -1.89
CCDC39-203ENST00000473854 NRP2O60462 931 aa3.22□□□□□ -1.89
CCDC39-203ENST00000473854 CFBP00751 764 aa3.22□□□□□ -1.89
CCDC39-203ENST00000473854 GPD1P21695 349 aa3.22□□□□□ -1.89
CCDC39-203ENST00000473854 RBM25P49756 843 aaKnown RBP3.22□□□□□ -1.89
CCDC39-203ENST00000473854 SOX10P56693 466 aa3.22□□□□□ -1.89
CCDC39-203ENST00000473854 MYBPC3Q14896 1274 aa3.22□□□□□ -1.89
CCDC39-203ENST00000473854 ZNF174Q15697 407 aa3.22□□□□□ -1.89
CCDC39-203ENST00000473854 BMT2Q1RMZ1 405 aa3.22□□□□□ -1.89
CCDC39-203ENST00000473854 FAM102AQ5T9C2 384 aaPredicted RBP3.22□□□□□ -1.89
CCDC39-203ENST00000473854 KIAA1841Q6NSI8 718 aa3.22□□□□□ -1.89
CCDC39-203ENST00000473854 BTNL9Q6UXG8 535 aa3.22□□□□□ -1.89
CCDC39-203ENST00000473854 TAS1R1Q7RTX1 841 aa3.22□□□□□ -1.89
CCDC39-203ENST00000473854 GPR149Q86SP6 731 aa3.22□□□□□ -1.89
CCDC39-203ENST00000473854 XYLT1Q86Y38 959 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms