RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 CYP46A1Q9Y6A2 500 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 PAPPAQ13219 1627 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 KIAA0232Q92628 1395 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 SBNO2Q9Y2G9 1366 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 MYPNQ86TC9 1320 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 ANKRD62A6NC57 917 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 DDX3YO15523 660 aaKnown RBP5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 TTI1O43156 1089 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 AKR1B10O60218 316 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 HIP1RO75146 1068 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 SUPT3HO75486 399 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 DLGAP3O95886 979 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 MSL3P1P0C860 447 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 TMPOP42166 694 aaKnown RBP5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 SERPINB8P50452 374 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 TUBP50607 506 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 ZNF131P52739 623 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 MTTPP55157 894 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 GPSM2P81274 684 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 CEBPZQ03701 1054 aaKnown RBP5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 ITIH3Q06033 890 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 MTX1Q13505 466 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 ANKRD1Q15327 319 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 BCL2A1Q16548 175 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 FXNQ16595 210 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 CCDC153Q494R4 210 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 CCDC152Q4G0S7 254 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 CEP85Q6P2H3 762 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 KLC3Q6P597 504 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 FMR1NBQ8N0W7 255 aaPredicted RBP5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 TAB3Q8N5C8 712 aaPredicted RBP5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 ATP6V0A1Q93050 837 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 IQCDQ96DY2 449 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 RPS6KC1Q96S38 1066 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 MRPL46Q9H2W6 279 aaKnown RBP5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 STAP2Q9UGK3 403 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 CARD8Q9Y2G2 431 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 ATP6V0A2Q9Y487 856 aa5.56□□□□□ -1.52
TMEM39A-206ENST00000473684 SLIT2O94813 1529 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 A0A1W2PQ27 194 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 A0A1W2PQ64 194 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 A0A1W2PQD8 194 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 A0A1W2PQH9 124 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 MGEA5O60502 916 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 DEAF1O75398 565 aaPredicted RBP5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 MYCLP1P12525 358 aaPredicted RBP5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 S100A1P23297 94 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 HSD3B2P26439 372 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 HOXD10P28358 340 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 PMS2P54278 862 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 RING1Q06587 406 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 ST3GAL1Q11201 340 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 ITGB3BPQ13352 177 aaPredicted RBP5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 RNF220Q5VTB9 566 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 TRIM68Q6AZZ1 485 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 GRAMD4Q6IC98 578 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 PDILTQ8N807 584 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 SYT2Q8N9I0 419 aaPredicted RBP5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 CCDC197Q8NCU1 140 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 ATP8B4Q8TF62 1192 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 ELMO3Q96BJ8 720 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 CCDC51Q96ER9 411 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 IFT74Q96LB3 600 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 GBP5Q96PP8 586 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 WDR18Q9BV38 432 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 TAF1DQ9H5J8 278 aaPredicted RBP5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 SYNCQ9H7C4 482 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 KCNK4Q9NYG8 393 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 DLGAP2Q9P1A6 1054 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 REV1Q9UBZ9 1251 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 FBXO9Q9UK97 447 aaPredicted RBP5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 AKAP12Q02952 1782 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 CAMTA1Q9Y6Y1 1673 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 CCDC85CA6NKD9 419 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 DCDC2CA8MYV0 355 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 AKR1B15C9JRZ8 316 aaPredicted RBP5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 PSMD14O00487 310 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 ENPP3O14638 875 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 MTRF1O75570 445 aaKnown RBP5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 MAP4K4O95819 1239 aaPredicted RBP5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 ATP1A3P13637 1013 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 CD68P34810 354 aaPredicted RBP5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 ACADVLP49748 655 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 GUCY1B3Q02153 619 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 ITGA7Q13683 1181 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 SPIDRQ14159 915 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 CNGA3Q16281 694 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 PARP10Q53GL7 1025 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 TMEM201Q5SNT2 666 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 NCAPH2Q6IBW4 605 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 TBC1D1Q86TI0 1168 aaPredicted RBP5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 STK11IPQ8N1F8 1099 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 MMGT1Q8N4V1 131 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 MREGQ8N565 214 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 FSIP1Q8NA03 581 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 DQX1Q8TE96 717 aaKnown RBP5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 MRPS27Q92552 414 aaKnown RBP5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 DPF2Q92785 391 aa5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 GFM2Q969S9 779 aaKnown RBP5.55□□□□□ -1.52
TMEM39A-206ENST00000473684 LENG1Q96BZ8 264 aaPredicted RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms