RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 GTF3C3Q9Y5Q9 886 aa24.91■■□□□ 1.58
PTP4A1-203ENST00000473334 TDRD15B5MCY1 1934 aaKnown RBP24.9■■□□□ 1.58
PTP4A1-203ENST00000473334 BDP1A6H8Y1 2624 aa24.9■■□□□ 1.58
PTP4A1-203ENST00000473334 K7ELQ4 463 aaPredicted RBP24.9■■□□□ 1.58
PTP4A1-203ENST00000473334 PER2O15055 1255 aa24.9■■□□□ 1.58
PTP4A1-203ENST00000473334 INPPL1O15357 1258 aa24.9■■□□□ 1.58
PTP4A1-203ENST00000473334 B4GALT3O60512 393 aa24.9■■□□□ 1.58
PTP4A1-203ENST00000473334 NPTXRO95502 500 aa24.9■■□□□ 1.58
PTP4A1-203ENST00000473334 PRKCBP05771 671 aa24.9■■□□□ 1.58
PTP4A1-203ENST00000473334 SLC11A1P49279 550 aa24.9■■□□□ 1.58
PTP4A1-203ENST00000473334 ZRSR1Q15695 479 aaKnown RBP24.9■■□□□ 1.58
PTP4A1-203ENST00000473334 CLUL1Q15846 466 aa24.9■■□□□ 1.58
PTP4A1-203ENST00000473334 TMEM173Q86WV6 379 aaPredicted RBP24.9■■□□□ 1.58
PTP4A1-203ENST00000473334 IGSF21Q96ID5 467 aa24.9■■□□□ 1.58
PTP4A1-203ENST00000473334 FAM193BQ96PV7 902 aaPredicted RBP24.9■■□□□ 1.58
PTP4A1-203ENST00000473334 APOL6Q9BWW8 343 aa24.9■■□□□ 1.58
PTP4A1-203ENST00000473334 CCDC113Q9H0I3 377 aa24.9■■□□□ 1.58
PTP4A1-203ENST00000473334 NT5C3AQ9H0P0 336 aa24.9■■□□□ 1.58
PTP4A1-203ENST00000473334 RNF39Q9H2S5 420 aa24.9■■□□□ 1.58
PTP4A1-203ENST00000473334 POLD4Q9HCU8 107 aa24.9■■□□□ 1.58
PTP4A1-203ENST00000473334 GIT1Q9Y2X7 761 aa24.9■■□□□ 1.58
PTP4A1-203ENST00000473334 ARL5CA6NH57 179 aa24.89■■□□□ 1.58
PTP4A1-203ENST00000473334 N4BP3O15049 544 aa24.89■■□□□ 1.58
PTP4A1-203ENST00000473334 DDHD2O94830 711 aa24.89■■□□□ 1.58
PTP4A1-203ENST00000473334 GLP2RO95838 553 aa24.89■■□□□ 1.58
PTP4A1-203ENST00000473334 POMCP01189 267 aa24.89■■□□□ 1.58
PTP4A1-203ENST00000473334 MLH1P40692 756 aa24.89■■□□□ 1.58
PTP4A1-203ENST00000473334 PRPF4BQ13523 1007 aaKnown RBP24.89■■□□□ 1.58
PTP4A1-203ENST00000473334 SMC1AQ14683 1233 aaKnown RBP24.89■■□□□ 1.58
PTP4A1-203ENST00000473334 FAM178BQ8IXR5 827 aa24.89■■□□□ 1.58
PTP4A1-203ENST00000473334 CDK5RAP3Q96JB5 506 aa24.89■■□□□ 1.58
PTP4A1-203ENST00000473334 MSLNLQ96KJ4 702 aa24.89■■□□□ 1.58
PTP4A1-203ENST00000473334 AK8Q96MA6 479 aa24.89■■□□□ 1.58
PTP4A1-203ENST00000473334 PNMA5Q96PV4 448 aa24.89■■□□□ 1.58
PTP4A1-203ENST00000473334 GAD1Q99259 594 aa24.89■■□□□ 1.58
PTP4A1-203ENST00000473334 TMEM175Q9BSA9 504 aa24.89■■□□□ 1.58
PTP4A1-203ENST00000473334 KIFC3Q9BVG8 833 aa24.89■■□□□ 1.58
PTP4A1-203ENST00000473334 CD207Q9UJ71 328 aa24.89■■□□□ 1.58
PTP4A1-203ENST00000473334 HIDE1A8MVS5 230 aa24.88■■□□□ 1.57
PTP4A1-203ENST00000473334 ACKR2O00590 384 aa24.88■■□□□ 1.57
PTP4A1-203ENST00000473334 EFNA5P52803 228 aa24.88■■□□□ 1.57
PTP4A1-203ENST00000473334 BMS1Q14692 1282 aaKnown RBP24.88■■□□□ 1.57
PTP4A1-203ENST00000473334 TMEM132AQ24JP5 1023 aa24.88■■□□□ 1.57
PTP4A1-203ENST00000473334 RINT1Q6NUQ1 792 aa24.88■■□□□ 1.57
PTP4A1-203ENST00000473334 BCL7CQ8WUZ0 217 aaPredicted RBP24.88■■□□□ 1.57
PTP4A1-203ENST00000473334 RUSC1Q9BVN2 902 aa24.88■■□□□ 1.57
PTP4A1-203ENST00000473334 PDZD7Q9H5P4 517 aa24.88■■□□□ 1.57
PTP4A1-203ENST00000473334 CLEC1BQ9P126 229 aa24.88■■□□□ 1.57
PTP4A1-203ENST00000473334 ZMYM2Q9UBW7 1377 aa24.88■■□□□ 1.57
PTP4A1-203ENST00000473334 TTLL13PA6NNM8 815 aa24.87■■□□□ 1.57
PTP4A1-203ENST00000473334 MBTPS2O43462 519 aa24.87■■□□□ 1.57
PTP4A1-203ENST00000473334 SLC26A4O43511 780 aa24.87■■□□□ 1.57
PTP4A1-203ENST00000473334 HIP1RO75146 1068 aa24.87■■□□□ 1.57
PTP4A1-203ENST00000473334 LIG1P18858 919 aa24.87■■□□□ 1.57
PTP4A1-203ENST00000473334 SYT1P21579 422 aa24.87■■□□□ 1.57
PTP4A1-203ENST00000473334 SMAD4Q13485 552 aaKnown RBP24.87■■□□□ 1.57
PTP4A1-203ENST00000473334 SF3A1Q15459 793 aaKnown RBP24.87■■□□□ 1.57
PTP4A1-203ENST00000473334 C1orf186Q6ZWK4 172 aa24.87■■□□□ 1.57
PTP4A1-203ENST00000473334 DDX53Q86TM3 631 aaKnown RBP24.87■■□□□ 1.57
PTP4A1-203ENST00000473334 CABP7Q86V35 215 aa24.87■■□□□ 1.57
PTP4A1-203ENST00000473334 VPS52Q8N1B4 723 aa24.87■■□□□ 1.57
PTP4A1-203ENST00000473334 DRC1Q96MC2 740 aa24.87■■□□□ 1.57
PTP4A1-203ENST00000473334 ZFP42Q96MM3 310 aa24.87■■□□□ 1.57
PTP4A1-203ENST00000473334 TIPINQ9BVW5 301 aa24.87■■□□□ 1.57
PTP4A1-203ENST00000473334 ZBP1Q9H171 429 aa24.87■■□□□ 1.57
PTP4A1-203ENST00000473334 BARX2Q9UMQ3 279 aaPredicted RBP24.87■■□□□ 1.57
PTP4A1-203ENST00000473334 ALDH2P05091 517 aa24.86■■□□□ 1.57
PTP4A1-203ENST00000473334 EDN1P05305 212 aa24.86■■□□□ 1.57
PTP4A1-203ENST00000473334 AKAP5P24588 427 aa24.86■■□□□ 1.57
PTP4A1-203ENST00000473334 SCNN1GP51170 649 aa24.86■■□□□ 1.57
PTP4A1-203ENST00000473334 TMEM119Q4V9L6 283 aa24.86■■□□□ 1.57
PTP4A1-203ENST00000473334 DAW1Q8N136 415 aa24.86■■□□□ 1.57
PTP4A1-203ENST00000473334 MRPL43Q8N983 215 aaKnown RBP24.86■■□□□ 1.57
PTP4A1-203ENST00000473334 PLIN2Q99541 437 aa24.86■■□□□ 1.57
PTP4A1-203ENST00000473334 ADPGKQ9BRR6 497 aa24.86■■□□□ 1.57
PTP4A1-203ENST00000473334 MIOSQ9NXC5 875 aa24.86■■□□□ 1.57
PTP4A1-203ENST00000473334 FAN1Q9Y2M0 1017 aa24.86■■□□□ 1.57
PTP4A1-203ENST00000473334 C2orf71A6NGG8 1288 aa24.85■■□□□ 1.57
PTP4A1-203ENST00000473334 SSBP05455 408 aaKnown RBP eCLIP24.85■■□□□ 1.57
PTP4A1-203ENST00000473334 SRGAP2BP0DMP2 458 aa24.85■■□□□ 1.57
PTP4A1-203ENST00000473334 GUCY2CP25092 1073 aa24.85■■□□□ 1.57
PTP4A1-203ENST00000473334 PEX3P56589 373 aa24.85■■□□□ 1.57
PTP4A1-203ENST00000473334 COASYQ13057 564 aa24.85■■□□□ 1.57
PTP4A1-203ENST00000473334 RESTQ13127 1097 aa24.85■■□□□ 1.57
PTP4A1-203ENST00000473334 MAPK7Q13164 816 aa24.85■■□□□ 1.57
PTP4A1-203ENST00000473334 DMP1Q13316 513 aaPredicted RBP24.85■■□□□ 1.57
PTP4A1-203ENST00000473334 SMAD2Q15796 467 aaKnown RBP24.85■■□□□ 1.57
PTP4A1-203ENST00000473334 COLGALT2Q8IYK4 626 aa24.85■■□□□ 1.57
PTP4A1-203ENST00000473334 SYT2Q8N9I0 419 aaPredicted RBP24.85■■□□□ 1.57
PTP4A1-203ENST00000473334 VN1R2Q8NFZ6 395 aa24.85■■□□□ 1.57
PTP4A1-203ENST00000473334 C17orf75Q9HAS0 396 aa24.85■■□□□ 1.57
PTP4A1-203ENST00000473334 FOXD4L1Q9NU39 408 aa24.85■■□□□ 1.57
PTP4A1-203ENST00000473334 DAXXQ9UER7 740 aaPredicted RBP24.85■■□□□ 1.57
PTP4A1-203ENST00000473334 STK39Q9UEW8 545 aa24.85■■□□□ 1.57
PTP4A1-203ENST00000473334 PRKAG3Q9UGI9 489 aa24.85■■□□□ 1.57
PTP4A1-203ENST00000473334 PARP2Q9UGN5 583 aa24.85■■□□□ 1.57
PTP4A1-203ENST00000473334 MYH11P35749 1972 aa24.85■■□□□ 1.57
PTP4A1-203ENST00000473334 PHLPP2Q6ZVD8 1323 aa24.85■■□□□ 1.57
PTP4A1-203ENST00000473334 CCDC169A6NNP5 214 aa24.84■■□□□ 1.57
PTP4A1-203ENST00000473334 NRP1O14786 923 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms