RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 PRIMPOLQ96LW4 560 aa12.77□□□□□ -0.37
COL4A3-205ENST00000471862 POP1Q99575 1024 aaKnown RBP12.77□□□□□ -0.37
COL4A3-205ENST00000471862 TMEM175Q9BSA9 504 aa12.77□□□□□ -0.37
COL4A3-205ENST00000471862 GBP3Q9H0R5 595 aa12.77□□□□□ -0.37
COL4A3-205ENST00000471862 S1PR5Q9H228 398 aa12.77□□□□□ -0.37
COL4A3-205ENST00000471862 FZD8Q9H461 694 aa12.77□□□□□ -0.37
COL4A3-205ENST00000471862 UPF2Q9HAU5 1272 aaKnown RBP12.77□□□□□ -0.37
COL4A3-205ENST00000471862 PRMT7Q9NVM4 692 aaPredicted RBP12.77□□□□□ -0.37
COL4A3-205ENST00000471862 MIOSQ9NXC5 875 aa12.77□□□□□ -0.37
COL4A3-205ENST00000471862 KANSL3Q9P2N6 904 aa12.77□□□□□ -0.37
COL4A3-205ENST00000471862 LRWD1Q9UFC0 647 aa12.77□□□□□ -0.37
COL4A3-205ENST00000471862 HES2Q9Y543 173 aa12.77□□□□□ -0.37
COL4A3-205ENST00000471862 ZMYM2Q9UBW7 1377 aa12.77□□□□□ -0.37
COL4A3-205ENST00000471862 LRRIQ4A6NIV6 560 aa12.76□□□□□ -0.37
COL4A3-205ENST00000471862 LOC730098B7Z3J9 87 aa12.76□□□□□ -0.37
COL4A3-205ENST00000471862 LAD1O00515 517 aa12.76□□□□□ -0.37
COL4A3-205ENST00000471862 CLASP2O75122 1294 aaKnown RBP12.76□□□□□ -0.37
COL4A3-205ENST00000471862 EFEMP2O95967 443 aa12.76□□□□□ -0.37
COL4A3-205ENST00000471862 POMCP01189 267 aa12.76□□□□□ -0.37
COL4A3-205ENST00000471862 CCT6AP40227 531 aaKnown RBP12.76□□□□□ -0.37
COL4A3-205ENST00000471862 NAMPTP43490 491 aa12.76□□□□□ -0.37
COL4A3-205ENST00000471862 NCBP1Q09161 790 aaKnown RBP12.76□□□□□ -0.37
COL4A3-205ENST00000471862 CBX2Q14781 532 aaPredicted RBP12.76□□□□□ -0.37
COL4A3-205ENST00000471862 SLC27A1Q6PCB7 646 aa12.76□□□□□ -0.37
COL4A3-205ENST00000471862 CDR2LQ86X02 465 aaPredicted RBP12.76□□□□□ -0.37
COL4A3-205ENST00000471862 COLGALT2Q8IYK4 626 aa12.76□□□□□ -0.37
COL4A3-205ENST00000471862 GSTCDQ8NEC7 633 aa12.76□□□□□ -0.37
COL4A3-205ENST00000471862 SNX29Q8TEQ0 813 aa12.76□□□□□ -0.37
COL4A3-205ENST00000471862 GAD1Q99259 594 aa12.76□□□□□ -0.37
COL4A3-205ENST00000471862 LRFN3Q9BTN0 628 aa12.76□□□□□ -0.37
COL4A3-205ENST00000471862 CCDC113Q9H0I3 377 aa12.76□□□□□ -0.37
COL4A3-205ENST00000471862 NXF3Q9H4D5 531 aaKnown RBP12.76□□□□□ -0.37
COL4A3-205ENST00000471862 MARCH5Q9NX47 278 aa12.76□□□□□ -0.37
COL4A3-205ENST00000471862 GIT1Q9Y2X7 761 aa12.76□□□□□ -0.37
COL4A3-205ENST00000471862 HCFC2Q9Y5Z7 792 aa12.76□□□□□ -0.37
COL4A3-205ENST00000471862 STK24Q9Y6E0 443 aa12.76□□□□□ -0.37
COL4A3-205ENST00000471862 ARL5CA6NH57 179 aa12.75□□□□□ -0.37
COL4A3-205ENST00000471862 TTLL13PA6NNM8 815 aa12.75□□□□□ -0.37
COL4A3-205ENST00000471862 PP2D1A8MPX8 630 aa12.75□□□□□ -0.37
COL4A3-205ENST00000471862 NRP1O14786 923 aa12.75□□□□□ -0.37
COL4A3-205ENST00000471862 DCXO43602 365 aa12.75□□□□□ -0.37
COL4A3-205ENST00000471862 NPTXRO95502 500 aa12.75□□□□□ -0.37
COL4A3-205ENST00000471862 CXCL14O95715 111 aa12.75□□□□□ -0.37
COL4A3-205ENST00000471862 EDN1P05305 212 aa12.75□□□□□ -0.37
COL4A3-205ENST00000471862 SRGAP2BP0DMP2 458 aa12.75□□□□□ -0.37
COL4A3-205ENST00000471862 MLH1P40692 756 aa12.75□□□□□ -0.37
COL4A3-205ENST00000471862 ATP2C1P98194 919 aaPredicted RBP12.75□□□□□ -0.37
COL4A3-205ENST00000471862 RILPL1Q5EBL4 403 aa12.75□□□□□ -0.37
COL4A3-205ENST00000471862 TMEM31Q5JXX7 168 aa12.75□□□□□ -0.37
COL4A3-205ENST00000471862 LLGL2Q6P1M3 1020 aa12.75□□□□□ -0.37
COL4A3-205ENST00000471862 ZBTB8OSQ8IWT0 167 aa12.75□□□□□ -0.37
COL4A3-205ENST00000471862 RNF168Q8IYW5 571 aaPredicted RBP12.75□□□□□ -0.37
COL4A3-205ENST00000471862 AUTS2Q8WXX7 1259 aa12.75□□□□□ -0.37
COL4A3-205ENST00000471862 CASP10Q92851 521 aa12.75□□□□□ -0.37
COL4A3-205ENST00000471862 ZFP42Q96MM3 310 aa12.75□□□□□ -0.37
COL4A3-205ENST00000471862 MMTAG2Q9BU76 263 aaKnown RBP12.75□□□□□ -0.37
COL4A3-205ENST00000471862 PHF7Q9BWX1 381 aaPredicted RBP12.75□□□□□ -0.37
COL4A3-205ENST00000471862 RAB34Q9BZG1 259 aa12.75□□□□□ -0.37
COL4A3-205ENST00000471862 C2orf40Q9H1Z8 148 aa12.75□□□□□ -0.37
COL4A3-205ENST00000471862 BHMT2Q9H2M3 363 aa12.75□□□□□ -0.37
COL4A3-205ENST00000471862 DDX19AQ9NUU7 478 aaKnown RBP12.75□□□□□ -0.37
COL4A3-205ENST00000471862 STK39Q9UEW8 545 aa12.75□□□□□ -0.37
COL4A3-205ENST00000471862 KIAA1024Q9UPX6 916 aa12.75□□□□□ -0.37
COL4A3-205ENST00000471862 FAN1Q9Y2M0 1017 aa12.75□□□□□ -0.37
COL4A3-205ENST00000471862 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.74□□□□□ -0.37
COL4A3-205ENST00000471862 FAM86C2PA6NEL3 165 aa12.74□□□□□ -0.37
COL4A3-205ENST00000471862 LILRB3O75022 631 aa12.74□□□□□ -0.37
COL4A3-205ENST00000471862 ALDH2P05091 517 aa12.74□□□□□ -0.37
COL4A3-205ENST00000471862 ALADP13716 330 aa12.74□□□□□ -0.37
COL4A3-205ENST00000471862 HOXB8P17481 243 aaPredicted RBP12.74□□□□□ -0.37
COL4A3-205ENST00000471862 SCNN1GP51170 649 aa12.74□□□□□ -0.37
COL4A3-205ENST00000471862 GIT2Q14161 759 aa12.74□□□□□ -0.37
COL4A3-205ENST00000471862 BMS1Q14692 1282 aaKnown RBP12.74□□□□□ -0.37
COL4A3-205ENST00000471862 PTPN14Q15678 1187 aa12.74□□□□□ -0.37
COL4A3-205ENST00000471862 HERC4Q5GLZ8 1057 aaPredicted RBP12.74□□□□□ -0.37
COL4A3-205ENST00000471862 MCTP1Q6DN14 999 aa12.74□□□□□ -0.37
COL4A3-205ENST00000471862 KCNK18Q7Z418 384 aa12.74□□□□□ -0.37
COL4A3-205ENST00000471862 SLC22A17Q8WUG5 538 aa12.74□□□□□ -0.37
COL4A3-205ENST00000471862 FAM193BQ96PV7 902 aaPredicted RBP12.74□□□□□ -0.37
COL4A3-205ENST00000471862 APOL6Q9BWW8 343 aa12.74□□□□□ -0.37
COL4A3-205ENST00000471862 TRIM6Q9C030 488 aaPredicted RBP12.74□□□□□ -0.37
COL4A3-205ENST00000471862 PDZD7Q9H5P4 517 aa12.74□□□□□ -0.37
COL4A3-205ENST00000471862 RAPGEFL1Q9UHV5 662 aa12.74□□□□□ -0.37
COL4A3-205ENST00000471862 TECTAO75443 2155 aa12.74□□□□□ -0.37
COL4A3-205ENST00000471862 TRIP11Q15643 1979 aa12.74□□□□□ -0.37
COL4A3-205ENST00000471862 DENND4AQ7Z401 1863 aa12.74□□□□□ -0.37
COL4A3-205ENST00000471862 MYH11P35749 1972 aa12.73□□□□□ -0.37
COL4A3-205ENST00000471862 E9PMD0 336 aa12.73□□□□□ -0.37
COL4A3-205ENST00000471862 ACKR2O00590 384 aa12.73□□□□□ -0.37
COL4A3-205ENST00000471862 SOD2P04179 222 aa12.73□□□□□ -0.37
COL4A3-205ENST00000471862 PRKCBP05771 671 aa12.73□□□□□ -0.37
COL4A3-205ENST00000471862 AKAP5P24588 427 aa12.73□□□□□ -0.37
COL4A3-205ENST00000471862 CDC25AP30304 524 aa12.73□□□□□ -0.37
COL4A3-205ENST00000471862 CUL4AQ13619 759 aa12.73□□□□□ -0.37
COL4A3-205ENST00000471862 PPP2R5AQ15172 486 aa12.73□□□□□ -0.37
COL4A3-205ENST00000471862 MAPK6Q16659 721 aa12.73□□□□□ -0.37
COL4A3-205ENST00000471862 HYIQ5T013 277 aa12.73□□□□□ -0.37
COL4A3-205ENST00000471862 DTHD1Q6ZMT9 781 aa12.73□□□□□ -0.37
COL4A3-205ENST00000471862 RNF135Q8IUD6 432 aa12.73□□□□□ -0.37
COL4A3-205ENST00000471862 HACE1Q8IYU2 909 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms