RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, human

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1-208	ENST00000471250	CPT1A	P50416	773 aa		28.24	■■■□□ 2.11
U2AF1-208	ENST00000471250	CYP24A1	Q07973	514 aa		28.24	■■■□□ 2.11
U2AF1-208	ENST00000471250	HSP90AA2P	Q14568	343 aa	Predicted RBP	28.24	■■■□□ 2.11
U2AF1-208	ENST00000471250	MFSD14C	Q5VZR4	134 aa		28.24	■■■□□ 2.11
U2AF1-208	ENST00000471250	TRPV1	Q8NER1	839 aa		28.24	■■■□□ 2.11
U2AF1-208	ENST00000471250	MRPL4	Q9BYD3	311 aa	Known RBP	28.24	■■■□□ 2.11
U2AF1-208	ENST00000471250	RRN3P2	A6NIE6	340 aa		28.23	■■■□□ 2.11
U2AF1-208	ENST00000471250	PRKCB	P05771	671 aa		28.23	■■■□□ 2.11
U2AF1-208	ENST00000471250	GJB1	P08034	283 aa		28.23	■■■□□ 2.11
U2AF1-208	ENST00000471250	UCHL3	P15374	230 aa		28.23	■■■□□ 2.11
U2AF1-208	ENST00000471250	TMOD1	P28289	359 aa		28.23	■■■□□ 2.11
U2AF1-208	ENST00000471250	PTEN	P60484	403 aa		28.23	■■■□□ 2.11
U2AF1-208	ENST00000471250	SP3	Q02447	781 aa		28.23	■■■□□ 2.11
U2AF1-208	ENST00000471250	PPP3CA	Q08209	521 aa		28.23	■■■□□ 2.11
U2AF1-208	ENST00000471250	PTPN14	Q15678	1187 aa		28.23	■■■□□ 2.11
U2AF1-208	ENST00000471250	MAPK6	Q16659	721 aa		28.23	■■■□□ 2.11
U2AF1-208	ENST00000471250	MARCH8	Q5T0T0	291 aa		28.23	■■■□□ 2.11
U2AF1-208	ENST00000471250	PARD3B	Q8TEW8	1205 aa		28.23	■■■□□ 2.11
U2AF1-208	ENST00000471250	TRIB2	Q92519	343 aa		28.23	■■■□□ 2.11
U2AF1-208	ENST00000471250	KAT2B	Q92831	832 aa		28.23	■■■□□ 2.11
U2AF1-208	ENST00000471250	ZBTB45	Q96K62	511 aa	Predicted RBP	28.23	■■■□□ 2.11
U2AF1-208	ENST00000471250	FAM213A	Q9BRX8	229 aa		28.23	■■■□□ 2.11
U2AF1-208	ENST00000471250	NFKBIZ	Q9BYH8	718 aa		28.23	■■■□□ 2.11
U2AF1-208	ENST00000471250	HAPLN2	Q9GZV7	340 aa		28.23	■■■□□ 2.11
U2AF1-208	ENST00000471250	AGO2	Q9UKV8	859 aa	Known RBP	28.23	■■■□□ 2.11
U2AF1-208	ENST00000471250	ZNF233	A6NK53	670 aa		28.23	■■■□□ 2.11
U2AF1-208	ENST00000471250	TRIM65	Q6PJ69	517 aa		28.23	■■■□□ 2.11
U2AF1-208	ENST00000471250	CCDC170	Q8IYT3	715 aa		28.23	■■■□□ 2.11
U2AF1-208	ENST00000471250	NLRP4	Q96MN2	994 aa		28.23	■■■□□ 2.11
U2AF1-208	ENST00000471250	EPN1	Q9Y6I3	576 aa	Predicted RBP	28.23	■■■□□ 2.11
U2AF1-208	ENST00000471250		A0A0B4J269	797 aa		28.22	■■■□□ 2.11
U2AF1-208	ENST00000471250	GOLGA6L9	A6NEM1	432 aa		28.22	■■■□□ 2.11
U2AF1-208	ENST00000471250	LDHA	P00338	332 aa	Known RBP	28.22	■■■□□ 2.11
U2AF1-208	ENST00000471250	CYBA	P13498	195 aa		28.22	■■■□□ 2.11
U2AF1-208	ENST00000471250	TNNT1	P13805	278 aa		28.22	■■■□□ 2.11
U2AF1-208	ENST00000471250	PRKCZ	Q05513	592 aa		28.22	■■■□□ 2.11
U2AF1-208	ENST00000471250	KIF22	Q14807	665 aa		28.22	■■■□□ 2.11
U2AF1-208	ENST00000471250	SFMBT2	Q5VUG0	894 aa		28.22	■■■□□ 2.11
U2AF1-208	ENST00000471250	INTS2	Q9H0H0	1204 aa	Known RBP	28.22	■■■□□ 2.11
U2AF1-208	ENST00000471250	FZD8	Q9H461	694 aa		28.22	■■■□□ 2.11
U2AF1-208	ENST00000471250	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	28.22	■■■□□ 2.11
U2AF1-208	ENST00000471250	FHOD1	Q9Y613	1164 aa		28.22	■■■□□ 2.11
U2AF1-208	ENST00000471250	KAT6A	Q92794	2004 aa		28.21	■■■□□ 2.11
U2AF1-208	ENST00000471250	NDUFA10	O95299	355 aa		28.21	■■■□□ 2.11
U2AF1-208	ENST00000471250	IRX5	P78411	483 aa	Predicted RBP	28.21	■■■□□ 2.11
U2AF1-208	ENST00000471250	CETN1	Q12798	172 aa		28.21	■■■□□ 2.11
U2AF1-208	ENST00000471250	USP37	Q86T82	979 aa		28.21	■■■□□ 2.11
U2AF1-208	ENST00000471250	IFNLR1	Q8IU57	520 aa	Predicted RBP	28.21	■■■□□ 2.11
U2AF1-208	ENST00000471250	EHBP1	Q8NDI1	1231 aa		28.21	■■■□□ 2.11
U2AF1-208	ENST00000471250	ACO2	Q99798	780 aa	Known RBP	28.21	■■■□□ 2.11
U2AF1-208	ENST00000471250	MYO6	Q9UM54	1294 aa		28.21	■■■□□ 2.11
U2AF1-208	ENST00000471250	DAAM1	Q9Y4D1	1078 aa		28.21	■■■□□ 2.11
U2AF1-208	ENST00000471250	LRRIQ3	A6PVS8	624 aa	Predicted RBP	28.2	■■■□□ 2.11
U2AF1-208	ENST00000471250	DUSP11	O75319	330 aa	Known RBP	28.2	■■■□□ 2.11
U2AF1-208	ENST00000471250	CYLC1	P35663	651 aa	Predicted RBP	28.2	■■■□□ 2.11
U2AF1-208	ENST00000471250	GCLM	P48507	274 aa		28.2	■■■□□ 2.11
U2AF1-208	ENST00000471250	LMO3	Q8TAP4	145 aa		28.2	■■■□□ 2.11
U2AF1-208	ENST00000471250	MSTO1	Q9BUK6	570 aa		28.2	■■■□□ 2.11
U2AF1-208	ENST00000471250	AIPL1	Q9NZN9	384 aa		28.2	■■■□□ 2.11
U2AF1-208	ENST00000471250	CASP8AP2	Q9UKL3	1982 aa		28.2	■■■□□ 2.11
U2AF1-208	ENST00000471250	TTLL13P	A6NNM8	815 aa		28.19	■■■□□ 2.1
U2AF1-208	ENST00000471250	HAS3	O00219	553 aa		28.19	■■■□□ 2.1
U2AF1-208	ENST00000471250	ACKR2	O00590	384 aa		28.19	■■■□□ 2.1
U2AF1-208	ENST00000471250	SMIM10L2A	P0DMW4	78 aa		28.19	■■■□□ 2.1
U2AF1-208	ENST00000471250	SMIM10L2B	P0DMW5	78 aa		28.19	■■■□□ 2.1
U2AF1-208	ENST00000471250	GTF2H1	P32780	548 aa		28.19	■■■□□ 2.1
U2AF1-208	ENST00000471250	CAP1	Q01518	475 aa		28.19	■■■□□ 2.1
U2AF1-208	ENST00000471250	MFSD10	Q14728	455 aa		28.19	■■■□□ 2.1
U2AF1-208	ENST00000471250	KIAA0753	Q2KHM9	967 aa		28.19	■■■□□ 2.1
U2AF1-208	ENST00000471250	EPC2	Q52LR7	807 aa		28.19	■■■□□ 2.1
U2AF1-208	ENST00000471250	ZNF784	Q8NCA9	323 aa	Predicted RBP	28.19	■■■□□ 2.1
U2AF1-208	ENST00000471250	ACRBP	Q8NEB7	543 aa		28.19	■■■□□ 2.1
U2AF1-208	ENST00000471250	TMEM117	Q9H0C3	514 aa		28.19	■■■□□ 2.1
U2AF1-208	ENST00000471250	ARHGAP20	Q9P2F6	1191 aa		28.19	■■■□□ 2.1
U2AF1-208	ENST00000471250	AKT3	Q9Y243	479 aa		28.19	■■■□□ 2.1
U2AF1-208	ENST00000471250	KIF2A	O00139	706 aa	Predicted RBP	28.19	■■■□□ 2.1
U2AF1-208	ENST00000471250	TOM1L1	O75674	476 aa		28.19	■■■□□ 2.1
U2AF1-208	ENST00000471250	MATR3	P43243	847 aa	Known RBP eCLIP	28.19	■■■□□ 2.1
U2AF1-208	ENST00000471250	PHKA2	P46019	1235 aa		28.19	■■■□□ 2.1
U2AF1-208	ENST00000471250	PSEN2	P49810	448 aa		28.19	■■■□□ 2.1
U2AF1-208	ENST00000471250	MXI1	P50539	228 aa		28.19	■■■□□ 2.1
U2AF1-208	ENST00000471250	MBTD1	Q05BQ5	628 aa		28.19	■■■□□ 2.1
U2AF1-208	ENST00000471250	PSMD6	Q15008	389 aa		28.19	■■■□□ 2.1
U2AF1-208	ENST00000471250	CRELD2	Q6UXH1	353 aa	Predicted RBP	28.19	■■■□□ 2.1
U2AF1-208	ENST00000471250	CCDC127	Q96BQ5	260 aa		28.19	■■■□□ 2.1
U2AF1-208	ENST00000471250	ZNF668	Q96K58	619 aa	Predicted RBP	28.19	■■■□□ 2.1
U2AF1-208	ENST00000471250	IFT122	Q9HBG6	1241 aa		28.19	■■■□□ 2.1
U2AF1-208	ENST00000471250	SETD4	Q9NVD3	440 aa		28.19	■■■□□ 2.1
U2AF1-208	ENST00000471250	ANKFY1	Q9P2R3	1169 aa		28.19	■■■□□ 2.1
U2AF1-208	ENST00000471250	NRCAM	Q92823	1304 aa		28.19	■■■□□ 2.1
U2AF1-208	ENST00000471250	TUBB4A	P04350	444 aa		28.18	■■■□□ 2.1
U2AF1-208	ENST00000471250	MYL3	P08590	195 aa		28.18	■■■□□ 2.1
U2AF1-208	ENST00000471250	MAP2K2	P36507	400 aa		28.18	■■■□□ 2.1
U2AF1-208	ENST00000471250	NLRP11	P59045	1033 aa	Known RBP	28.18	■■■□□ 2.1
U2AF1-208	ENST00000471250	BEX3	Q00994	111 aa		28.18	■■■□□ 2.1
U2AF1-208	ENST00000471250	FSCN1	Q16658	493 aa	Known RBP	28.18	■■■□□ 2.1
U2AF1-208	ENST00000471250	IQCE	Q6IPM2	695 aa		28.18	■■■□□ 2.1
U2AF1-208	ENST00000471250	TMEM8A	Q9HCN3	771 aa		28.18	■■■□□ 2.1
U2AF1-208	ENST00000471250	RNF186	Q9NXI6	227 aa		28.18	■■■□□ 2.1
U2AF1-208	ENST00000471250	EIF3CL	B5ME19	914 aa	Known RBP	28.17	■■■□□ 2.1

Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms