RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 NMT1P30419 496 aaKnown RBP8.67□□□□□ -1.02
SMC4-212ENST00000470240 SFNP31947 248 aa8.67□□□□□ -1.02
SMC4-212ENST00000470240 CXCR5P32302 372 aa8.67□□□□□ -1.02
SMC4-212ENST00000470240 ACTN2P35609 894 aa8.67□□□□□ -1.02
SMC4-212ENST00000470240 BFSP1Q12934 665 aa8.67□□□□□ -1.02
SMC4-212ENST00000470240 ZSCAN26Q16670 478 aa8.67□□□□□ -1.02
SMC4-212ENST00000470240 PCNX4Q63HM2 1172 aa8.67□□□□□ -1.02
SMC4-212ENST00000470240 XRRA1Q6P2D8 792 aa8.67□□□□□ -1.02
SMC4-212ENST00000470240 ZNF720Q7Z2F6 126 aa8.67□□□□□ -1.02
SMC4-212ENST00000470240 RHOT2Q8IXI1 618 aa8.67□□□□□ -1.02
SMC4-212ENST00000470240 CYP2W1Q8TAV3 490 aa8.67□□□□□ -1.02
SMC4-212ENST00000470240 AENQ8WTP8 325 aaKnown RBP8.67□□□□□ -1.02
SMC4-212ENST00000470240 U2AF1L4Q8WU68 220 aaKnown RBP8.67□□□□□ -1.02
SMC4-212ENST00000470240 JDP2Q8WYK2 163 aa8.67□□□□□ -1.02
SMC4-212ENST00000470240 HVCN1Q96D96 273 aa8.67□□□□□ -1.02
SMC4-212ENST00000470240 TSEN34Q9BSV6 310 aaKnown RBP8.67□□□□□ -1.02
SMC4-212ENST00000470240 LRRC1Q9BTT6 524 aa8.67□□□□□ -1.02
SMC4-212ENST00000470240 ZNF341Q9BYN7 854 aa8.67□□□□□ -1.02
SMC4-212ENST00000470240 FAM107BQ9H098 131 aa8.67□□□□□ -1.02
SMC4-212ENST00000470240 UNC45AQ9H3U1 944 aa8.67□□□□□ -1.02
SMC4-212ENST00000470240 FAM204AQ9H8W3 233 aa8.67□□□□□ -1.02
SMC4-212ENST00000470240 AGPAT3Q9NRZ7 376 aa8.67□□□□□ -1.02
SMC4-212ENST00000470240 GOLGA6AQ9NYA3 693 aa8.67□□□□□ -1.02
SMC4-212ENST00000470240 SUCLA2Q9P2R7 463 aaPredicted RBP8.67□□□□□ -1.02
SMC4-212ENST00000470240 KCNG1Q9UIX4 513 aa8.67□□□□□ -1.02
SMC4-212ENST00000470240 NAGPAQ9UK23 515 aa8.67□□□□□ -1.02
SMC4-212ENST00000470240 AMFRQ9UKV5 643 aa8.67□□□□□ -1.02
SMC4-212ENST00000470240 CNTNAP1P78357 1384 aa8.66□□□□□ -1.02
SMC4-212ENST00000470240 PFASO15067 1338 aa8.66□□□□□ -1.02
SMC4-212ENST00000470240 RPTORQ8N122 1335 aa8.66□□□□□ -1.02
SMC4-212ENST00000470240 F8VZ95 297 aa8.66□□□□□ -1.02
SMC4-212ENST00000470240 NKRFO15226 690 aaKnown RBP eCLIP8.66□□□□□ -1.02
SMC4-212ENST00000470240 MAPK13O15264 365 aa8.66□□□□□ -1.02
SMC4-212ENST00000470240 CEP104O60308 925 aa8.66□□□□□ -1.02
SMC4-212ENST00000470240 PHACTR2O75167 634 aa8.66□□□□□ -1.02
SMC4-212ENST00000470240 TMEM253P0C7T8 217 aa8.66□□□□□ -1.02
SMC4-212ENST00000470240 ALAS1P13196 640 aa8.66□□□□□ -1.02
SMC4-212ENST00000470240 QARSP47897 775 aaKnown RBP8.66□□□□□ -1.02
SMC4-212ENST00000470240 DNA2P51530 1060 aa8.66□□□□□ -1.02
SMC4-212ENST00000470240 CDR1P51861 262 aa8.66□□□□□ -1.02
SMC4-212ENST00000470240 SMTNP53814 917 aa8.66□□□□□ -1.02
SMC4-212ENST00000470240 JAM2P57087 298 aa8.66□□□□□ -1.02
SMC4-212ENST00000470240 UBXN2AP68543 259 aa8.66□□□□□ -1.02
SMC4-212ENST00000470240 KRT76Q01546 638 aa8.66□□□□□ -1.02
SMC4-212ENST00000470240 MTMR1Q13613 665 aa8.66□□□□□ -1.02
SMC4-212ENST00000470240 MTMR3Q13615 1198 aa8.66□□□□□ -1.02
SMC4-212ENST00000470240 CUL1Q13616 776 aa8.66□□□□□ -1.02
SMC4-212ENST00000470240 CFAP58Q5T655 872 aa8.66□□□□□ -1.02
SMC4-212ENST00000470240 DCAF15Q66K64 600 aa8.66□□□□□ -1.02
SMC4-212ENST00000470240 CIAPIN1Q6FI81 312 aa8.66□□□□□ -1.02
SMC4-212ENST00000470240 ZNF571Q7Z3V5 609 aaPredicted RBP8.66□□□□□ -1.02
SMC4-212ENST00000470240 MAATS1Q7Z4T9 603 aa8.66□□□□□ -1.02
SMC4-212ENST00000470240 IRF2BP2Q7Z5L9 587 aa8.66□□□□□ -1.02
SMC4-212ENST00000470240 NLRX1Q86UT6 975 aa8.66□□□□□ -1.02
SMC4-212ENST00000470240 C12orf56Q8IXR9 622 aa8.66□□□□□ -1.02
SMC4-212ENST00000470240 RDM1Q8NG50 284 aa8.66□□□□□ -1.02
SMC4-212ENST00000470240 ACTRT1Q8TDG2 376 aa8.66□□□□□ -1.02
SMC4-212ENST00000470240 RFFLQ8WZ73 363 aa8.66□□□□□ -1.02
SMC4-212ENST00000470240 LRRC45Q96CN5 670 aa8.66□□□□□ -1.02
SMC4-212ENST00000470240 FAM81BQ96LP2 452 aa8.66□□□□□ -1.02
SMC4-212ENST00000470240 GMLQ99445 158 aa8.66□□□□□ -1.02
SMC4-212ENST00000470240 P2RX7Q99572 595 aaKnown RBP8.66□□□□□ -1.02
SMC4-212ENST00000470240 TMEM39BQ9GZU3 492 aa8.66□□□□□ -1.02
SMC4-212ENST00000470240 INTS2Q9H0H0 1204 aaKnown RBP8.66□□□□□ -1.02
SMC4-212ENST00000470240 SLITRK6Q9H5Y7 841 aa8.66□□□□□ -1.02
SMC4-212ENST00000470240 SUGCTQ9HAC7 445 aa8.66□□□□□ -1.02
SMC4-212ENST00000470240 AS3MTQ9HBK9 375 aa8.66□□□□□ -1.02
SMC4-212ENST00000470240 ZCCHC17Q9NP64 241 aaKnown RBP8.66□□□□□ -1.02
SMC4-212ENST00000470240 RBM12Q9NTZ6 932 aaKnown RBP8.66□□□□□ -1.02
SMC4-212ENST00000470240 SEPT11Q9NVA2 429 aaKnown RBP8.66□□□□□ -1.02
SMC4-212ENST00000470240 APEX2Q9UBZ4 518 aa8.66□□□□□ -1.02
SMC4-212ENST00000470240 DNAJC12Q9UKB3 198 aa8.66□□□□□ -1.02
SMC4-212ENST00000470240 ZMYM2Q9UBW7 1377 aa8.65□□□□□ -1.02
SMC4-212ENST00000470240 NCANO14594 1321 aa8.65□□□□□ -1.02
SMC4-212ENST00000470240 WDR64B1ANS9 1081 aa8.65□□□□□ -1.02
SMC4-212ENST00000470240 DDX39AO00148 427 aaKnown RBP8.65□□□□□ -1.02
SMC4-212ENST00000470240 TGFB1I1O43294 461 aa8.65□□□□□ -1.02
SMC4-212ENST00000470240 MAN1A2O60476 641 aa8.65□□□□□ -1.02
SMC4-212ENST00000470240 CTNND1O60716 968 aaKnown RBP8.65□□□□□ -1.02
SMC4-212ENST00000470240 LYPLA2O95372 231 aa8.65□□□□□ -1.02
SMC4-212ENST00000470240 ARP10275 920 aa8.65□□□□□ -1.02
SMC4-212ENST00000470240 PLS3P13797 630 aa8.65□□□□□ -1.02
SMC4-212ENST00000470240 HSPA6P17066 643 aa8.65□□□□□ -1.02
SMC4-212ENST00000470240 RPS12P25398 132 aaKnown RBP8.65□□□□□ -1.02
SMC4-212ENST00000470240 HOXD13P35453 343 aa8.65□□□□□ -1.02
SMC4-212ENST00000470240 CASP4P49662 377 aa8.65□□□□□ -1.02
SMC4-212ENST00000470240 VAMP7P51809 220 aa8.65□□□□□ -1.02
SMC4-212ENST00000470240 MCCD1P59942 119 aaPredicted RBP8.65□□□□□ -1.02
SMC4-212ENST00000470240 PSMC5P62195 406 aa8.65□□□□□ -1.02
SMC4-212ENST00000470240 GUCY2DQ02846 1103 aa8.65□□□□□ -1.02
SMC4-212ENST00000470240 CBLBQ13191 982 aa8.65□□□□□ -1.02
SMC4-212ENST00000470240 HLTFQ14527 1009 aaKnown RBP eCLIP8.65□□□□□ -1.025e-35■■■■■ 127.1
SMC4-212ENST00000470240 DRAP1Q14919 205 aaPredicted RBP8.65□□□□□ -1.02
SMC4-212ENST00000470240 MIGA2Q7L4E1 593 aa8.65□□□□□ -1.02
SMC4-212ENST00000470240 OTUD6AQ7L8S5 288 aa8.65□□□□□ -1.02
SMC4-212ENST00000470240 DAAM2Q86T65 1068 aa8.65□□□□□ -1.02
SMC4-212ENST00000470240 USP38Q8NB14 1042 aa8.65□□□□□ -1.02
SMC4-212ENST00000470240 XXYLT1Q8NBI6 393 aa8.65□□□□□ -1.02
SMC4-212ENST00000470240 TPCN2Q8NHX9 752 aa8.65□□□□□ -1.02
SMC4-212ENST00000470240 ATP6V0A1Q93050 837 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms