RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 CDCA2Q69YH5 1023 aaPredicted RBP12.36□□□□□ -0.43
COL4A6-205ENST00000468338 TWF2Q6IBS0 349 aaKnown RBP12.36□□□□□ -0.43
COL4A6-205ENST00000468338 LRRC55Q6ZSA7 311 aa12.36□□□□□ -0.43
COL4A6-205ENST00000468338 MRPL10Q7Z7H8 261 aaKnown RBP12.36□□□□□ -0.43
COL4A6-205ENST00000468338 SPPL3Q8TCT6 385 aa12.36□□□□□ -0.43
COL4A6-205ENST00000468338 ATXN2LQ8WWM7 1075 aaKnown RBP12.36□□□□□ -0.43
COL4A6-205ENST00000468338 PPM1EQ8WY54 764 aa12.36□□□□□ -0.43
COL4A6-205ENST00000468338 AK8Q96MA6 479 aa12.36□□□□□ -0.43
COL4A6-205ENST00000468338 CCDC43Q96MW1 224 aaKnown RBP12.36□□□□□ -0.43
COL4A6-205ENST00000468338 POLR3FQ9H1D9 316 aaPredicted RBP12.36□□□□□ -0.43
COL4A6-205ENST00000468338 BHMT2Q9H2M3 363 aa12.36□□□□□ -0.43
COL4A6-205ENST00000468338 GPRC5CQ9NQ84 441 aa12.36□□□□□ -0.43
COL4A6-205ENST00000468338 DDX19AQ9NUU7 478 aaKnown RBP12.36□□□□□ -0.43
COL4A6-205ENST00000468338 TYW1Q9NV66 732 aaKnown RBP12.36□□□□□ -0.43
COL4A6-205ENST00000468338 MTMR6Q9Y217 621 aa12.36□□□□□ -0.43
COL4A6-205ENST00000468338 PIN4Q9Y237 131 aaKnown RBP12.36□□□□□ -0.43
COL4A6-205ENST00000468338 REV3LO60673 3130 aa12.36□□□□□ -0.43
COL4A6-205ENST00000468338 CUL9Q8IWT3 2517 aa12.36□□□□□ -0.43
COL4A6-205ENST00000468338 ARHGEF35A5YM69 484 aa12.35□□□□□ -0.43
COL4A6-205ENST00000468338 SLC26A4O43511 780 aa12.35□□□□□ -0.43
COL4A6-205ENST00000468338 TSPAN1O60635 241 aa12.35□□□□□ -0.43
COL4A6-205ENST00000468338 RNF40O75150 1001 aa12.35□□□□□ -0.43
COL4A6-205ENST00000468338 ITGB1P05556 798 aa12.35□□□□□ -0.43
COL4A6-205ENST00000468338 PTPAQ15257 358 aa12.35□□□□□ -0.43
COL4A6-205ENST00000468338 FAM187BQ17R55 369 aa12.35□□□□□ -0.43
COL4A6-205ENST00000468338 KLHL23Q8NBE8 558 aa12.35□□□□□ -0.43
COL4A6-205ENST00000468338 PRR7Q8TB68 274 aa12.35□□□□□ -0.43
COL4A6-205ENST00000468338 ADAMTS19Q8TE59 1207 aa12.35□□□□□ -0.43
COL4A6-205ENST00000468338 BSNDQ8WZ55 320 aa12.35□□□□□ -0.43
COL4A6-205ENST00000468338 CCDC51Q96ER9 411 aa12.35□□□□□ -0.43
COL4A6-205ENST00000468338 PNMA5Q96PV4 448 aa12.35□□□□□ -0.43
COL4A6-205ENST00000468338 FZD8Q9H461 694 aa12.35□□□□□ -0.43
COL4A6-205ENST00000468338 THEGQ9P2T0 379 aa12.35□□□□□ -0.43
COL4A6-205ENST00000468338 HCSTQ9UBK5 93 aa12.35□□□□□ -0.43
COL4A6-205ENST00000468338 DNM3Q9UQ16 869 aa12.35□□□□□ -0.43
COL4A6-205ENST00000468338 PCDHB2Q9Y5E7 798 aa12.35□□□□□ -0.43
COL4A6-205ENST00000468338 MORC2Q9Y6X9 1032 aaPredicted RBP12.35□□□□□ -0.43
COL4A6-205ENST00000468338 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.34□□□□□ -0.43
COL4A6-205ENST00000468338 VPS37CA5D8V6 355 aaPredicted RBP12.34□□□□□ -0.43
COL4A6-205ENST00000468338 VWA3AA6NCI4 1184 aa12.34□□□□□ -0.43
COL4A6-205ENST00000468338 MEIS3P2A8K0S8 358 aa12.34□□□□□ -0.43
COL4A6-205ENST00000468338 E9PMD0 336 aa12.34□□□□□ -0.43
COL4A6-205ENST00000468338 SF3A1Q15459 793 aaKnown RBP12.34□□□□□ -0.43
COL4A6-205ENST00000468338 TIGD5Q53EQ6 642 aa12.34□□□□□ -0.43
COL4A6-205ENST00000468338 AGMOQ6ZNB7 445 aa12.34□□□□□ -0.43
COL4A6-205ENST00000468338 C1orf186Q6ZWK4 172 aa12.34□□□□□ -0.43
COL4A6-205ENST00000468338 MAEAQ7L5Y9 396 aa12.34□□□□□ -0.43
COL4A6-205ENST00000468338 KCNK18Q7Z418 384 aa12.34□□□□□ -0.43
COL4A6-205ENST00000468338 LRRC43Q8N309 656 aa12.34□□□□□ -0.43
COL4A6-205ENST00000468338 MICALL1Q8N3F8 863 aa12.34□□□□□ -0.43
COL4A6-205ENST00000468338 PRIMPOLQ96LW4 560 aa12.34□□□□□ -0.43
COL4A6-205ENST00000468338 AAASQ9NRG9 546 aa12.34□□□□□ -0.43
COL4A6-205ENST00000468338 COG5Q9UP83 839 aa12.34□□□□□ -0.43
COL4A6-205ENST00000468338 PLXNA4Q9HCM2 1894 aa12.34□□□□□ -0.43
COL4A6-205ENST00000468338 A0A1B0GUA9 196 aa12.33□□□□□ -0.44
COL4A6-205ENST00000468338 INO80B-WBP1J3KQ70 363 aa12.33□□□□□ -0.44
COL4A6-205ENST00000468338 INPPL1O15357 1258 aa12.33□□□□□ -0.44
COL4A6-205ENST00000468338 STX6O43752 255 aa12.33□□□□□ -0.44
COL4A6-205ENST00000468338 OFD1O75665 1012 aa12.33□□□□□ -0.44
COL4A6-205ENST00000468338 ERLIN2O94905 339 aa12.33□□□□□ -0.44
COL4A6-205ENST00000468338 ARF4P18085 180 aaPredicted RBP12.33□□□□□ -0.44
COL4A6-205ENST00000468338 LAG3P18627 525 aa12.33□□□□□ -0.44
COL4A6-205ENST00000468338 NCLP19338 710 aaKnown RBP12.33□□□□□ -0.44
COL4A6-205ENST00000468338 IBSPP21815 317 aaPredicted RBP12.33□□□□□ -0.44
COL4A6-205ENST00000468338 DNAJB1P25685 340 aa12.33□□□□□ -0.44
COL4A6-205ENST00000468338 NAMPTP43490 491 aa12.33□□□□□ -0.44
COL4A6-205ENST00000468338 PLCB3Q01970 1234 aa12.33□□□□□ -0.44
COL4A6-205ENST00000468338 UBE3AQ05086 875 aa12.33□□□□□ -0.44
COL4A6-205ENST00000468338 GRIN1Q05586 938 aa12.33□□□□□ -0.44
COL4A6-205ENST00000468338 MAPK7Q13164 816 aa12.33□□□□□ -0.44
COL4A6-205ENST00000468338 TMEM119Q4V9L6 283 aa12.33□□□□□ -0.44
COL4A6-205ENST00000468338 RINT1Q6NUQ1 792 aa12.33□□□□□ -0.44
COL4A6-205ENST00000468338 NOTUMQ6P988 496 aa12.33□□□□□ -0.44
COL4A6-205ENST00000468338 ABI1Q8IZP0 508 aa12.33□□□□□ -0.44
COL4A6-205ENST00000468338 DAW1Q8N136 415 aa12.33□□□□□ -0.44
COL4A6-205ENST00000468338 SYT2Q8N9I0 419 aaPredicted RBP12.33□□□□□ -0.44
COL4A6-205ENST00000468338 COLGALT1Q8NBJ5 622 aa12.33□□□□□ -0.44
COL4A6-205ENST00000468338 SMG8Q8ND04 991 aaKnown RBP12.33□□□□□ -0.44
COL4A6-205ENST00000468338 CNNM3Q8NE01 707 aa12.33□□□□□ -0.44
COL4A6-205ENST00000468338 HELQQ8TDG4 1101 aa12.33□□□□□ -0.44
COL4A6-205ENST00000468338 KIFAP3Q92845 792 aa12.33□□□□□ -0.44
COL4A6-205ENST00000468338 LPPQ93052 612 aa12.33□□□□□ -0.44
COL4A6-205ENST00000468338 ASB2Q96Q27 587 aa12.33□□□□□ -0.44
COL4A6-205ENST00000468338 MRPL9Q9BYD2 267 aaKnown RBP12.33□□□□□ -0.44
COL4A6-205ENST00000468338 CCDC113Q9H0I3 377 aa12.33□□□□□ -0.44
COL4A6-205ENST00000468338 NT5C3AQ9H0P0 336 aa12.33□□□□□ -0.44
COL4A6-205ENST00000468338 CSRNP2Q9H175 543 aa12.33□□□□□ -0.44
COL4A6-205ENST00000468338 ALG2Q9H553 416 aa12.33□□□□□ -0.44
COL4A6-205ENST00000468338 NSUN3Q9H649 340 aaKnown RBP12.33□□□□□ -0.44
COL4A6-205ENST00000468338 ALG13Q9NP73 1137 aaKnown RBP12.33□□□□□ -0.44
COL4A6-205ENST00000468338 PCDHB12Q9Y5F1 795 aa12.33□□□□□ -0.44
COL4A6-205ENST00000468338 VCANP13611 3396 aa12.33□□□□□ -0.44
COL4A6-205ENST00000468338 LRRIQ4A6NIV6 560 aa12.32□□□□□ -0.44
COL4A6-205ENST00000468338 LONP1P36776 959 aaKnown RBP12.32□□□□□ -0.44
COL4A6-205ENST00000468338 MRPS5P82675 430 aaKnown RBP12.32□□□□□ -0.44
COL4A6-205ENST00000468338 PPP2R5AQ15172 486 aa12.32□□□□□ -0.44
COL4A6-205ENST00000468338 CTC1Q2NKJ3 1217 aa12.32□□□□□ -0.44
COL4A6-205ENST00000468338 TCEAL5Q5H9L2 206 aa12.32□□□□□ -0.44
COL4A6-205ENST00000468338 TJAP1Q5JTD0 557 aa12.32□□□□□ -0.44
COL4A6-205ENST00000468338 VARS2Q5ST30 1063 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms