RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 DUSP6Q16828 381 aa18.9■□□□□ 0.62
SSBP1-207ENST00000468267 SLC27A1Q6PCB7 646 aa18.9■□□□□ 0.62
SSBP1-207ENST00000468267 TMC7Q7Z402 723 aa18.9■□□□□ 0.62
SSBP1-207ENST00000468267 TMEM169Q96HH4 297 aa18.9■□□□□ 0.62
SSBP1-207ENST00000468267 IGSF21Q96ID5 467 aa18.9■□□□□ 0.62
SSBP1-207ENST00000468267 MSLNLQ96KJ4 702 aa18.9■□□□□ 0.62
SSBP1-207ENST00000468267 IFT74Q96LB3 600 aa18.9■□□□□ 0.62
SSBP1-207ENST00000468267 TRIM6Q9C030 488 aaPredicted RBP18.9■□□□□ 0.62
SSBP1-207ENST00000468267 CLEC1BQ9P126 229 aa18.9■□□□□ 0.62
SSBP1-207ENST00000468267 CD207Q9UJ71 328 aa18.9■□□□□ 0.62
SSBP1-207ENST00000468267 HES2Q9Y543 173 aa18.9■□□□□ 0.62
SSBP1-207ENST00000468267 ARL5CA6NH57 179 aa18.89■□□□□ 0.61
SSBP1-207ENST00000468267 HIDE1A8MVS5 230 aa18.89■□□□□ 0.61
SSBP1-207ENST00000468267 DDHD2O94830 711 aa18.89■□□□□ 0.61
SSBP1-207ENST00000468267 NPTXRO95502 500 aa18.89■□□□□ 0.61
SSBP1-207ENST00000468267 GLP2RO95838 553 aa18.89■□□□□ 0.61
SSBP1-207ENST00000468267 POMCP01189 267 aa18.89■□□□□ 0.61
SSBP1-207ENST00000468267 SLC11A1P49279 550 aa18.89■□□□□ 0.61
SSBP1-207ENST00000468267 CLUL1Q15846 466 aa18.89■□□□□ 0.61
SSBP1-207ENST00000468267 MAPK6Q16659 721 aa18.89■□□□□ 0.61
SSBP1-207ENST00000468267 HYIQ5T013 277 aa18.89■□□□□ 0.61
SSBP1-207ENST00000468267 KCNK18Q7Z418 384 aa18.89■□□□□ 0.61
SSBP1-207ENST00000468267 DDX53Q86TM3 631 aaKnown RBP18.89■□□□□ 0.61
SSBP1-207ENST00000468267 TMEM173Q86WV6 379 aaPredicted RBP18.89■□□□□ 0.61
SSBP1-207ENST00000468267 CDR2LQ86X02 465 aaPredicted RBP18.89■□□□□ 0.61
SSBP1-207ENST00000468267 HACE1Q8IYU2 909 aa18.89■□□□□ 0.61
SSBP1-207ENST00000468267 DEPTORQ8TB45 409 aa18.89■□□□□ 0.61
SSBP1-207ENST00000468267 FAM193BQ96PV7 902 aaPredicted RBP18.89■□□□□ 0.61
SSBP1-207ENST00000468267 CCDC113Q9H0I3 377 aa18.89■□□□□ 0.61
SSBP1-207ENST00000468267 NXF3Q9H4D5 531 aaKnown RBP18.89■□□□□ 0.61
SSBP1-207ENST00000468267 GIT1Q9Y2X7 761 aa18.89■□□□□ 0.61
SSBP1-207ENST00000468267 MYH11P35749 1972 aa18.88■□□□□ 0.61
SSBP1-207ENST00000468267 VPS37CA5D8V6 355 aaPredicted RBP18.88■□□□□ 0.61
SSBP1-207ENST00000468267 TTLL13PA6NNM8 815 aa18.88■□□□□ 0.61
SSBP1-207ENST00000468267 ACKR2O00590 384 aa18.88■□□□□ 0.61
SSBP1-207ENST00000468267 ALDH2P05091 517 aa18.88■□□□□ 0.61
SSBP1-207ENST00000468267 PRKCBP05771 671 aa18.88■□□□□ 0.61
SSBP1-207ENST00000468267 EFNA5P52803 228 aa18.88■□□□□ 0.61
SSBP1-207ENST00000468267 COASYQ13057 564 aa18.88■□□□□ 0.61
SSBP1-207ENST00000468267 SMAD4Q13485 552 aaKnown RBP18.88■□□□□ 0.61
SSBP1-207ENST00000468267 SMC1AQ14683 1233 aaKnown RBP18.88■□□□□ 0.61
SSBP1-207ENST00000468267 VPS52Q8N1B4 723 aa18.88■□□□□ 0.61
SSBP1-207ENST00000468267 KCTD17Q8N5Z5 321 aa18.88■□□□□ 0.61
SSBP1-207ENST00000468267 MRPL43Q8N983 215 aaKnown RBP18.88■□□□□ 0.61
SSBP1-207ENST00000468267 VN1R2Q8NFZ6 395 aa18.88■□□□□ 0.61
SSBP1-207ENST00000468267 BCL7CQ8WUZ0 217 aaPredicted RBP18.88■□□□□ 0.61
SSBP1-207ENST00000468267 INTS4Q96HW7 963 aaKnown RBP18.88■□□□□ 0.61
SSBP1-207ENST00000468267 PNMA5Q96PV4 448 aa18.88■□□□□ 0.61
SSBP1-207ENST00000468267 GAD1Q99259 594 aa18.88■□□□□ 0.61
SSBP1-207ENST00000468267 TMEM175Q9BSA9 504 aa18.88■□□□□ 0.61
SSBP1-207ENST00000468267 APOL6Q9BWW8 343 aa18.88■□□□□ 0.61
SSBP1-207ENST00000468267 CD320Q9NPF0 282 aa18.88■□□□□ 0.61
SSBP1-207ENST00000468267 C2orf71A6NGG8 1288 aa18.87■□□□□ 0.61
SSBP1-207ENST00000468267 MBTPS2O43462 519 aa18.87■□□□□ 0.61
SSBP1-207ENST00000468267 CXCL14O95715 111 aa18.87■□□□□ 0.61
SSBP1-207ENST00000468267 BMP15O95972 392 aa18.87■□□□□ 0.61
SSBP1-207ENST00000468267 PRPF4BQ13523 1007 aaKnown RBP18.87■□□□□ 0.61
SSBP1-207ENST00000468267 KCNC3Q14003 757 aa18.87■□□□□ 0.61
SSBP1-207ENST00000468267 BMS1Q14692 1282 aaKnown RBP18.87■□□□□ 0.61
SSBP1-207ENST00000468267 ZRSR1Q15695 479 aaKnown RBP18.87■□□□□ 0.61
SSBP1-207ENST00000468267 SMAD2Q15796 467 aaKnown RBP18.87■□□□□ 0.61
SSBP1-207ENST00000468267 RINT1Q6NUQ1 792 aa18.87■□□□□ 0.61
SSBP1-207ENST00000468267 TMEM184AQ6ZMB5 413 aa18.87■□□□□ 0.61
SSBP1-207ENST00000468267 C1orf186Q6ZWK4 172 aa18.87■□□□□ 0.61
SSBP1-207ENST00000468267 DAW1Q8N136 415 aa18.87■□□□□ 0.61
SSBP1-207ENST00000468267 AK8Q96MA6 479 aa18.87■□□□□ 0.61
SSBP1-207ENST00000468267 ZFP42Q96MM3 310 aa18.87■□□□□ 0.61
SSBP1-207ENST00000468267 RUSC1Q9BVN2 902 aa18.87■□□□□ 0.61
SSBP1-207ENST00000468267 NT5C3AQ9H0P0 336 aa18.87■□□□□ 0.61
SSBP1-207ENST00000468267 PDZD7Q9H5P4 517 aa18.87■□□□□ 0.61
SSBP1-207ENST00000468267 MIOSQ9NXC5 875 aa18.87■□□□□ 0.61
SSBP1-207ENST00000468267 PRKAG3Q9UGI9 489 aa18.87■□□□□ 0.61
SSBP1-207ENST00000468267 BARX2Q9UMQ3 279 aaPredicted RBP18.87■□□□□ 0.61
SSBP1-207ENST00000468267 FAN1Q9Y2M0 1017 aa18.87■□□□□ 0.61
SSBP1-207ENST00000468267 ZMYM2Q9UBW7 1377 aa18.86■□□□□ 0.61
SSBP1-207ENST00000468267 N4BP3O15049 544 aa18.86■□□□□ 0.61
SSBP1-207ENST00000468267 SLC26A4O43511 780 aa18.86■□□□□ 0.61
SSBP1-207ENST00000468267 HIP1RO75146 1068 aa18.86■□□□□ 0.61
SSBP1-207ENST00000468267 SYT1P21579 422 aa18.86■□□□□ 0.61
SSBP1-207ENST00000468267 AKAP5P24588 427 aa18.86■□□□□ 0.61
SSBP1-207ENST00000468267 MLH1P40692 756 aa18.86■□□□□ 0.61
SSBP1-207ENST00000468267 RBM10P98175 930 aaKnown RBP18.86■□□□□ 0.61
SSBP1-207ENST00000468267 COLGALT2Q8IYK4 626 aa18.86■□□□□ 0.61
SSBP1-207ENST00000468267 KIFC3Q9BVG8 833 aa18.86■□□□□ 0.61
SSBP1-207ENST00000468267 VN1R3Q9BXE9 311 aa18.86■□□□□ 0.61
SSBP1-207ENST00000468267 ZBP1Q9H171 429 aa18.86■□□□□ 0.61
SSBP1-207ENST00000468267 K7ELQ4 463 aaPredicted RBP18.85■□□□□ 0.61
SSBP1-207ENST00000468267 NRP1O14786 923 aa18.85■□□□□ 0.61
SSBP1-207ENST00000468267 EDN1P05305 212 aa18.85■□□□□ 0.61
SSBP1-207ENST00000468267 CTSAP10619 480 aa18.85■□□□□ 0.61
SSBP1-207ENST00000468267 LIG1P18858 919 aa18.85■□□□□ 0.61
SSBP1-207ENST00000468267 NPTX2P47972 431 aa18.85■□□□□ 0.61
SSBP1-207ENST00000468267 SCNN1GP51170 649 aa18.85■□□□□ 0.61
SSBP1-207ENST00000468267 PEX3P56589 373 aa18.85■□□□□ 0.61
SSBP1-207ENST00000468267 DSC1Q08554 894 aa18.85■□□□□ 0.61
SSBP1-207ENST00000468267 SF3A1Q15459 793 aaKnown RBP18.85■□□□□ 0.61
SSBP1-207ENST00000468267 TMEM132AQ24JP5 1023 aa18.85■□□□□ 0.61
SSBP1-207ENST00000468267 TMEM119Q4V9L6 283 aa18.85■□□□□ 0.61
SSBP1-207ENST00000468267 CABP7Q86V35 215 aa18.85■□□□□ 0.61
SSBP1-207ENST00000468267 GJD3Q8N144 294 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms