RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 A0A0A6YYJ9 748 aa5.91□□□□□ -1.46
XRN1-206ENST00000467077 APOL3O95236 402 aa5.91□□□□□ -1.46
XRN1-206ENST00000467077 EGR2P11161 476 aaPredicted RBP5.91□□□□□ -1.46
XRN1-206ENST00000467077 FDXRP22570 491 aa5.91□□□□□ -1.46
XRN1-206ENST00000467077 MGAT1P26572 445 aa5.91□□□□□ -1.46
XRN1-206ENST00000467077 MPLP40238 635 aa5.91□□□□□ -1.46
XRN1-206ENST00000467077 DUSP2Q05923 314 aa5.91□□□□□ -1.46
XRN1-206ENST00000467077 TIGD7Q6NT04 549 aaPredicted RBP5.91□□□□□ -1.46
XRN1-206ENST00000467077 XYLT1Q86Y38 959 aa5.91□□□□□ -1.46
XRN1-206ENST00000467077 OR10H5Q8NGA6 315 aa5.91□□□□□ -1.46
XRN1-206ENST00000467077 SEMA4GQ9NTN9 838 aa5.91□□□□□ -1.46
XRN1-206ENST00000467077 INTS7Q9NVH2 962 aaKnown RBP5.91□□□□□ -1.46
XRN1-206ENST00000467077 COL3A1P02461 1466 aaPredicted RBP5.9□□□□□ -1.46
XRN1-206ENST00000467077 OPHN1O60890 802 aa5.9□□□□□ -1.46
XRN1-206ENST00000467077 SRSF4Q08170 494 aaKnown RBP5.9□□□□□ -1.46
XRN1-206ENST00000467077 RASGRF1Q13972 1273 aa5.9□□□□□ -1.46
XRN1-206ENST00000467077 EPHA7Q15375 998 aa5.9□□□□□ -1.46
XRN1-206ENST00000467077 ZNF174Q15697 407 aa5.9□□□□□ -1.46
XRN1-206ENST00000467077 PDCD4Q53EL6 469 aaKnown RBP5.9□□□□□ -1.46
XRN1-206ENST00000467077 ZNF428Q96B54 188 aa5.9□□□□□ -1.46
XRN1-206ENST00000467077 ZNF778Q96MU6 729 aa5.9□□□□□ -1.46
XRN1-206ENST00000467077 ADAM2Q99965 735 aa5.9□□□□□ -1.46
XRN1-206ENST00000467077 TINF2Q9BSI4 451 aa5.9□□□□□ -1.46
XRN1-206ENST00000467077 TEX101Q9BY14 249 aa5.9□□□□□ -1.46
XRN1-206ENST00000467077 FPGT-TNNI3KV9GXZ4 949 aa5.9□□□□□ -1.46
XRN1-206ENST00000467077 MAST3O60307 1309 aa5.9□□□□□ -1.47
XRN1-206ENST00000467077 H7C1D1 291 aa5.89□□□□□ -1.47
XRN1-206ENST00000467077 FOSP01100 380 aaPredicted RBP5.89□□□□□ -1.47
XRN1-206ENST00000467077 FAM153BP0C7A2 387 aa5.89□□□□□ -1.47
XRN1-206ENST00000467077 RBP3P10745 1247 aa5.89□□□□□ -1.47
XRN1-206ENST00000467077 KRTAP10-6P60371 365 aaPredicted RBP5.89□□□□□ -1.47
XRN1-206ENST00000467077 RESTQ13127 1097 aa5.89□□□□□ -1.47
XRN1-206ENST00000467077 LONRF2Q1L5Z9 754 aa5.89□□□□□ -1.47
XRN1-206ENST00000467077 PHYKPLQ8IUZ5 450 aa5.89□□□□□ -1.47
XRN1-206ENST00000467077 MAP3K2Q9Y2U5 619 aa5.89□□□□□ -1.47
XRN1-206ENST00000467077 MSRB2Q9Y3D2 182 aa5.89□□□□□ -1.47
XRN1-206ENST00000467077 CCDC85CA6NKD9 419 aa5.88□□□□□ -1.47
XRN1-206ENST00000467077 CDKL5O76039 1030 aa5.88□□□□□ -1.47
XRN1-206ENST00000467077 ONECUT2O95948 504 aa5.88□□□□□ -1.47
XRN1-206ENST00000467077 SIM1P81133 766 aaPredicted RBP5.88□□□□□ -1.47
XRN1-206ENST00000467077 ADCY1Q08828 1119 aa5.88□□□□□ -1.47
XRN1-206ENST00000467077 ZNF169Q14929 603 aaPredicted RBP5.88□□□□□ -1.47
XRN1-206ENST00000467077 ZC3H12BQ5HYM0 836 aaKnown RBP5.88□□□□□ -1.47
XRN1-206ENST00000467077 KIAA1841Q6NSI8 718 aa5.88□□□□□ -1.47
XRN1-206ENST00000467077 DRICH1Q6PGQ1 229 aaPredicted RBP5.88□□□□□ -1.47
XRN1-206ENST00000467077 PIK3C3Q8NEB9 887 aa5.88□□□□□ -1.47
XRN1-206ENST00000467077 POGKQ9P215 609 aa5.88□□□□□ -1.47
XRN1-206ENST00000467077 ZNF70Q9UC06 446 aaPredicted RBP5.88□□□□□ -1.47
XRN1-206ENST00000467077 TCRBV16S1A1N1A0A5B0 115 aa5.87□□□□□ -1.47
XRN1-206ENST00000467077 CACNA2D1P54289 1103 aa5.87□□□□□ -1.47
XRN1-206ENST00000467077 TRIM61Q5EBN2 209 aa5.87□□□□□ -1.47
XRN1-206ENST00000467077 ABHD17CQ6PCB6 329 aa5.87□□□□□ -1.47
XRN1-206ENST00000467077 GPRIN1Q7Z2K8 1008 aa5.87□□□□□ -1.47
XRN1-206ENST00000467077 DDX53Q86TM3 631 aaKnown RBP5.87□□□□□ -1.47
XRN1-206ENST00000467077 KIAA1958Q8N8K9 716 aa5.87□□□□□ -1.47
XRN1-206ENST00000467077 SCLYQ96I15 445 aa5.87□□□□□ -1.47
XRN1-206ENST00000467077 SOX7Q9BT81 388 aa5.87□□□□□ -1.47
XRN1-206ENST00000467077 ALG13Q9NP73 1137 aaKnown RBP5.87□□□□□ -1.47
XRN1-206ENST00000467077 LRIT1Q9P2V4 623 aa5.87□□□□□ -1.47
XRN1-206ENST00000467077 USP15Q9Y4E8 981 aaPredicted RBP5.87□□□□□ -1.47
XRN1-206ENST00000467077 DVL2O14641 736 aa5.86□□□□□ -1.47
XRN1-206ENST00000467077 PROP1O75360 226 aa5.86□□□□□ -1.47
XRN1-206ENST00000467077 PRPF6O94906 941 aaKnown RBP5.86□□□□□ -1.47
XRN1-206ENST00000467077 POU3F3P20264 500 aaPredicted RBP5.86□□□□□ -1.47
XRN1-206ENST00000467077 RANGAP1P46060 587 aaPredicted RBP5.86□□□□□ -1.47
XRN1-206ENST00000467077 SPDYE7PQ495Y7 208 aa5.86□□□□□ -1.47
XRN1-206ENST00000467077 EFCAB12Q6NXP0 572 aa5.86□□□□□ -1.47
XRN1-206ENST00000467077 KANSL1Q7Z3B3 1105 aa5.86□□□□□ -1.47
XRN1-206ENST00000467077 SYT12Q8IV01 421 aa5.86□□□□□ -1.47
XRN1-206ENST00000467077 CKAP2LQ8IYA6 745 aa5.86□□□□□ -1.47
XRN1-206ENST00000467077 CHST14Q8NCH0 376 aa5.86□□□□□ -1.47
XRN1-206ENST00000467077 LRRC3CA6NJW4 275 aa5.85□□□□□ -1.47
XRN1-206ENST00000467077 MARCH11A6NNE9 402 aa5.85□□□□□ -1.47
XRN1-206ENST00000467077 B5MCH6 92 aa5.85□□□□□ -1.47
XRN1-206ENST00000467077 M0R2C6 588 aa5.85□□□□□ -1.47
XRN1-206ENST00000467077 RARRES1P49788 294 aa5.85□□□□□ -1.47
XRN1-206ENST00000467077 MYL10Q9BUA6 226 aa5.85□□□□□ -1.47
XRN1-206ENST00000467077 KDM2BQ8NHM5 1336 aa5.84□□□□□ -1.47
XRN1-206ENST00000467077 PTX3P26022 381 aaPredicted RBP5.84□□□□□ -1.47
XRN1-206ENST00000467077 MECP2P51608 486 aaKnown RBP5.84□□□□□ -1.47
XRN1-206ENST00000467077 Q6ZNX1 250 aa5.84□□□□□ -1.47
XRN1-206ENST00000467077 GRASPQ7Z6J2 395 aaPredicted RBP5.84□□□□□ -1.47
XRN1-206ENST00000467077 SH2D3CQ8N5H7 860 aa5.84□□□□□ -1.47
XRN1-206ENST00000467077 Q96MF0 132 aa5.84□□□□□ -1.47
XRN1-206ENST00000467077 HEPHQ9BQS7 1158 aa5.84□□□□□ -1.47
XRN1-206ENST00000467077 ALOXE3Q9BYJ1 711 aa5.84□□□□□ -1.47
XRN1-206ENST00000467077 POFUT1Q9H488 388 aa5.84□□□□□ -1.47
XRN1-206ENST00000467077 CABP5Q9NP86 173 aa5.84□□□□□ -1.47
XRN1-206ENST00000467077 PODXL2Q9NZ53 605 aa5.84□□□□□ -1.47
XRN1-206ENST00000467077 SLC17A6Q9P2U8 582 aa5.84□□□□□ -1.47
XRN1-206ENST00000467077 SALL3Q9BXA9 1300 aa5.83□□□□□ -1.48
XRN1-206ENST00000467077 MGST3O14880 152 aa5.83□□□□□ -1.48
XRN1-206ENST00000467077 C1QL1O75973 258 aa5.83□□□□□ -1.48
XRN1-206ENST00000467077 PCDH8O95206 1070 aa5.83□□□□□ -1.48
XRN1-206ENST00000467077 LY86O95711 162 aa5.83□□□□□ -1.48
XRN1-206ENST00000467077 KCNA6P17658 529 aa5.83□□□□□ -1.48
XRN1-206ENST00000467077 MRPS35P82673 323 aaKnown RBP5.83□□□□□ -1.48
XRN1-206ENST00000467077 CD69Q07108 199 aa5.83□□□□□ -1.48
XRN1-206ENST00000467077 CDYL2Q8N8U2 506 aa5.83□□□□□ -1.48
XRN1-206ENST00000467077 PPP1R14CQ8TAE6 165 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms