RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 ELLP55199 621 aaPredicted RBP3.37□□□□□ -1.87
CCDC93-205ENST00000466171 GUCY1B3Q02153 619 aa3.37□□□□□ -1.87
CCDC93-205ENST00000466171 CFAP100Q494V2 611 aa3.37□□□□□ -1.87
CCDC93-205ENST00000466171 CCDC178Q5BJE1 867 aa3.37□□□□□ -1.87
CCDC93-205ENST00000466171 CDCA2Q69YH5 1023 aaPredicted RBP3.37□□□□□ -1.87
CCDC93-205ENST00000466171 CCDC62Q6P9F0 684 aa3.37□□□□□ -1.87
CCDC93-205ENST00000466171 LMBR1LQ6UX01 489 aa3.37□□□□□ -1.87
CCDC93-205ENST00000466171 TAS1R1Q7RTX1 841 aa3.37□□□□□ -1.87
CCDC93-205ENST00000466171 HDGFL2Q7Z4V5 671 aaPredicted RBP3.37□□□□□ -1.87
CCDC93-205ENST00000466171 NPM2Q86SE8 214 aaKnown RBP3.37□□□□□ -1.87
CCDC93-205ENST00000466171 PIK3C3Q8NEB9 887 aa3.37□□□□□ -1.87
CCDC93-205ENST00000466171 PPP1R14CQ8TAE6 165 aa3.37□□□□□ -1.87
CCDC93-205ENST00000466171 RTF1Q92541 710 aaKnown RBP3.37□□□□□ -1.87
CCDC93-205ENST00000466171 SLC9A6Q92581 669 aa3.37□□□□□ -1.87
CCDC93-205ENST00000466171 SOX7Q9BT81 388 aa3.37□□□□□ -1.87
CCDC93-205ENST00000466171 RSAD1Q9HA92 442 aa3.37□□□□□ -1.87
CCDC93-205ENST00000466171 IGSF5Q9NSI5 407 aa3.37□□□□□ -1.87
CCDC93-205ENST00000466171 POLR2AP24928 1970 aaKnown RBP3.36□□□□□ -1.87
CCDC93-205ENST00000466171 LY86O95711 162 aa3.36□□□□□ -1.87
CCDC93-205ENST00000466171 C1RP00736 705 aa3.36□□□□□ -1.87
CCDC93-205ENST00000466171 RBP3P10745 1247 aa3.36□□□□□ -1.87
CCDC93-205ENST00000466171 ZNF37AP17032 561 aaPredicted RBP3.36□□□□□ -1.87
CCDC93-205ENST00000466171 CXCR5P32302 372 aa3.36□□□□□ -1.87
CCDC93-205ENST00000466171 RNASE9P60153 205 aaKnown RBP3.36□□□□□ -1.87
CCDC93-205ENST00000466171 KRTAP10-7P60409 375 aaPredicted RBP3.36□□□□□ -1.87
CCDC93-205ENST00000466171 APBA1Q02410 837 aa3.36□□□□□ -1.87
CCDC93-205ENST00000466171 CD69Q07108 199 aa3.36□□□□□ -1.87
CCDC93-205ENST00000466171 ABHD17BQ5VST6 288 aa3.36□□□□□ -1.87
CCDC93-205ENST00000466171 ARMC6Q6NXE6 501 aa3.36□□□□□ -1.87
CCDC93-205ENST00000466171 ESRP1Q6NXG1 681 aaKnown RBP3.36□□□□□ -1.87
CCDC93-205ENST00000466171 FBXO42Q6P3S6 717 aa3.36□□□□□ -1.87
CCDC93-205ENST00000466171 UNQ6494/PRO21346Q6UXR6 183 aa3.36□□□□□ -1.87
CCDC93-205ENST00000466171 LILRA3Q8N6C8 439 aaPredicted RBP3.36□□□□□ -1.87
CCDC93-205ENST00000466171 CAGE1Q8TC20 777 aa3.36□□□□□ -1.87
CCDC93-205ENST00000466171 CDC5LQ99459 802 aaKnown RBP3.36□□□□□ -1.87
CCDC93-205ENST00000466171 LSM14BQ9BX40 385 aaKnown RBP3.36□□□□□ -1.87
CCDC93-205ENST00000466171 CPEB1Q9BZB8 566 aaKnown RBP3.36□□□□□ -1.87
CCDC93-205ENST00000466171 OXSMQ9NWU1 459 aa3.36□□□□□ -1.87
CCDC93-205ENST00000466171 POGKQ9P215 609 aa3.36□□□□□ -1.87
CCDC93-205ENST00000466171 USP18Q9UMW8 372 aa3.36□□□□□ -1.87
CCDC93-205ENST00000466171 PIPSLA2A3N6 862 aa3.35□□□□□ -1.87
CCDC93-205ENST00000466171 B5MCH6 92 aa3.35□□□□□ -1.87
CCDC93-205ENST00000466171 DNAJC8O75937 253 aaPredicted RBP3.35□□□□□ -1.87
CCDC93-205ENST00000466171 DDX6P26196 483 aaKnown RBP eCLIP3.35□□□□□ -1.87
CCDC93-205ENST00000466171 ZFP36P26651 326 aaKnown RBP3.35□□□□□ -1.87
CCDC93-205ENST00000466171 FAM189BP81408 668 aa3.35□□□□□ -1.87
CCDC93-205ENST00000466171 NHLH2Q02577 135 aa3.35□□□□□ -1.87
CCDC93-205ENST00000466171 LRRC32Q14392 662 aa3.35□□□□□ -1.87
CCDC93-205ENST00000466171 ZNF460Q14592 562 aa3.35□□□□□ -1.87
CCDC93-205ENST00000466171 BEAN1Q3B7T3 259 aa3.35□□□□□ -1.87
CCDC93-205ENST00000466171 PRR16Q569H4 304 aa3.35□□□□□ -1.87
CCDC93-205ENST00000466171 EFCAB12Q6NXP0 572 aa3.35□□□□□ -1.87
CCDC93-205ENST00000466171 DRICH1Q6PGQ1 229 aaPredicted RBP3.35□□□□□ -1.87
CCDC93-205ENST00000466171 GLB1L2Q8IW92 636 aa3.35□□□□□ -1.87
CCDC93-205ENST00000466171 EFHBQ8N7U6 833 aa3.35□□□□□ -1.87
CCDC93-205ENST00000466171 CPEB3Q8NE35 698 aaKnown RBP3.35□□□□□ -1.87
CCDC93-205ENST00000466171 NTN5Q8WTR8 489 aaPredicted RBP3.35□□□□□ -1.87
CCDC93-205ENST00000466171 GAB3Q8WWW8 586 aa3.35□□□□□ -1.87
CCDC93-205ENST00000466171 LINC00476Q8WZB0 136 aa3.35□□□□□ -1.87
CCDC93-205ENST00000466171 C8orf37Q96NL8 207 aa3.35□□□□□ -1.87
CCDC93-205ENST00000466171 CLUHP3Q96NS8 147 aa3.35□□□□□ -1.87
CCDC93-205ENST00000466171 SPATA5L1Q9BVQ7 753 aa3.35□□□□□ -1.87
CCDC93-205ENST00000466171 INTS7Q9NVH2 962 aaKnown RBP3.35□□□□□ -1.87
CCDC93-205ENST00000466171 RNF181Q9P0P0 153 aa3.35□□□□□ -1.87
CCDC93-205ENST00000466171 SEC24DO94855 1032 aaPredicted RBP3.34□□□□□ -1.87
CCDC93-205ENST00000466171 CFBP00751 764 aa3.34□□□□□ -1.87
CCDC93-205ENST00000466171 CLEC2LP0C7M8 214 aa3.34□□□□□ -1.87
CCDC93-205ENST00000466171 CLK3P49761 638 aaKnown RBP3.34□□□□□ -1.87
CCDC93-205ENST00000466171 SEC24CP53992 1094 aa3.34□□□□□ -1.87
CCDC93-205ENST00000466171 MGAT5Q09328 741 aa3.34□□□□□ -1.87
CCDC93-205ENST00000466171 MPP3Q13368 585 aa3.34□□□□□ -1.87
CCDC93-205ENST00000466171 NFE2L2Q16236 605 aa3.34□□□□□ -1.87
CCDC93-205ENST00000466171 EPHA10Q5JZY3 1008 aa3.34□□□□□ -1.87
CCDC93-205ENST00000466171 COLEC12Q5KU26 742 aa3.34□□□□□ -1.87
CCDC93-205ENST00000466171 PDZD4Q76G19 769 aaPredicted RBP3.34□□□□□ -1.87
CCDC93-205ENST00000466171 GPRIN1Q7Z2K8 1008 aa3.34□□□□□ -1.87
CCDC93-205ENST00000466171 XYLT1Q86Y38 959 aa3.34□□□□□ -1.87
CCDC93-205ENST00000466171 KIF18BQ86Y91 864 aa3.34□□□□□ -1.87
CCDC93-205ENST00000466171 LILRB2Q8N423 598 aa3.34□□□□□ -1.87
CCDC93-205ENST00000466171 OR10H5Q8NGA6 315 aa3.34□□□□□ -1.87
CCDC93-205ENST00000466171 PMFBP1Q8TBY8 1022 aa3.34□□□□□ -1.87
CCDC93-205ENST00000466171 RSAD2Q8WXG1 361 aa3.34□□□□□ -1.87
CCDC93-205ENST00000466171 R3HDMLQ9H3Y0 253 aa3.34□□□□□ -1.87
CCDC93-205ENST00000466171 ZMAT4Q9H898 229 aa3.34□□□□□ -1.87
CCDC93-205ENST00000466171 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.34□□□□□ -1.87
CCDC93-205ENST00000466171 SYBUQ9NX95 663 aa3.34□□□□□ -1.87
CCDC93-205ENST00000466171 MAGEC2Q9UBF1 373 aaPredicted RBP3.34□□□□□ -1.87
CCDC93-205ENST00000466171 KCNG1Q9UIX4 513 aa3.34□□□□□ -1.87
CCDC93-205ENST00000466171 MSRAQ9UJ68 235 aa3.34□□□□□ -1.87
CCDC93-205ENST00000466171 CHST2Q9Y4C5 530 aa3.34□□□□□ -1.87
CCDC93-205ENST00000466171 EPN1Q9Y6I3 576 aaPredicted RBP3.34□□□□□ -1.87
CCDC93-205ENST00000466171 INO80B-WBP1J3KQ70 363 aa3.33□□□□□ -1.88
CCDC93-205ENST00000466171 LEFTY2O00292 366 aa3.33□□□□□ -1.88
CCDC93-205ENST00000466171 ELL2O00472 640 aaPredicted RBP3.33□□□□□ -1.88
CCDC93-205ENST00000466171 LTA4HP09960 611 aaKnown RBP3.33□□□□□ -1.88
CCDC93-205ENST00000466171 ZSCAN20P17040 1043 aaPredicted RBP3.33□□□□□ -1.88
CCDC93-205ENST00000466171 TYRP1P17643 537 aa3.33□□□□□ -1.88
CCDC93-205ENST00000466171 KPNA1P52294 538 aaPredicted RBP3.33□□□□□ -1.88
CCDC93-205ENST00000466171 OCRLQ01968 901 aa3.33□□□□□ -1.88
CCDC93-205ENST00000466171 SART3Q15020 963 aaKnown RBP3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms