RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 MIOSQ9NXC5 875 aa24.1■■□□□ 1.45
LIME1-203ENST00000465591 NPTXRO95502 500 aa24.09■■□□□ 1.45
LIME1-203ENST00000465591 MLH1P40692 756 aa24.09■■□□□ 1.45
LIME1-203ENST00000465591 NAMPTP43490 491 aa24.09■■□□□ 1.45
LIME1-203ENST00000465591 NCBP1Q09161 790 aaKnown RBP24.09■■□□□ 1.45
LIME1-203ENST00000465591 SMAD4Q13485 552 aaKnown RBP24.09■■□□□ 1.45
LIME1-203ENST00000465591 KRT79Q5XKE5 535 aa24.09■■□□□ 1.45
LIME1-203ENST00000465591 ZFP42Q96MM3 310 aa24.09■■□□□ 1.45
LIME1-203ENST00000465591 PNMA5Q96PV4 448 aa24.09■■□□□ 1.45
LIME1-203ENST00000465591 CCDC113Q9H0I3 377 aa24.09■■□□□ 1.45
LIME1-203ENST00000465591 NGRNQ9NPE2 291 aaKnown RBP24.09■■□□□ 1.45
LIME1-203ENST00000465591 PRMT7Q9NVM4 692 aaPredicted RBP24.09■■□□□ 1.45
LIME1-203ENST00000465591 C2orf71A6NGG8 1288 aa24.08■■□□□ 1.45
LIME1-203ENST00000465591 ARL5CA6NH57 179 aa24.08■■□□□ 1.45
LIME1-203ENST00000465591 INPPL1O15357 1258 aa24.08■■□□□ 1.45
LIME1-203ENST00000465591 EYA4O95677 639 aa24.08■■□□□ 1.45
LIME1-203ENST00000465591 SMAD2Q15796 467 aaKnown RBP24.08■■□□□ 1.45
LIME1-203ENST00000465591 FAM187BQ17R55 369 aa24.08■■□□□ 1.45
LIME1-203ENST00000465591 SLC27A1Q6PCB7 646 aa24.08■■□□□ 1.45
LIME1-203ENST00000465591 ZBTB8OSQ8IWT0 167 aa24.08■■□□□ 1.45
LIME1-203ENST00000465591 DAW1Q8N136 415 aa24.08■■□□□ 1.45
LIME1-203ENST00000465591 GJD3Q8N144 294 aa24.08■■□□□ 1.45
LIME1-203ENST00000465591 VPS52Q8N1B4 723 aa24.08■■□□□ 1.45
LIME1-203ENST00000465591 MRPL43Q8N983 215 aaKnown RBP24.08■■□□□ 1.45
LIME1-203ENST00000465591 SMRP1Q8NCR6 262 aa24.08■■□□□ 1.45
LIME1-203ENST00000465591 AUTS2Q8WXX7 1259 aa24.08■■□□□ 1.45
LIME1-203ENST00000465591 CDCA3Q99618 268 aaPredicted RBP24.08■■□□□ 1.45
LIME1-203ENST00000465591 RUSC1Q9BVN2 902 aa24.08■■□□□ 1.45
LIME1-203ENST00000465591 ZBP1Q9H171 429 aa24.08■■□□□ 1.45
LIME1-203ENST00000465591 EPHX3Q9H6B9 360 aa24.08■■□□□ 1.45
LIME1-203ENST00000465591 STK24Q9Y6E0 443 aa24.08■■□□□ 1.45
LIME1-203ENST00000465591 VWA3AA6NCI4 1184 aa24.07■■□□□ 1.44
LIME1-203ENST00000465591 AKAP5P24588 427 aa24.07■■□□□ 1.44
LIME1-203ENST00000465591 SCNN1GP51170 649 aa24.07■■□□□ 1.44
LIME1-203ENST00000465591 ZP2Q05996 745 aa24.07■■□□□ 1.44
LIME1-203ENST00000465591 COASYQ13057 564 aa24.07■■□□□ 1.44
LIME1-203ENST00000465591 GSTCDQ8NEC7 633 aa24.07■■□□□ 1.44
LIME1-203ENST00000465591 PRIMPOLQ96LW4 560 aa24.07■■□□□ 1.44
LIME1-203ENST00000465591 TRIM6Q9C030 488 aaPredicted RBP24.07■■□□□ 1.44
LIME1-203ENST00000465591 PDZD7Q9H5P4 517 aa24.07■■□□□ 1.44
LIME1-203ENST00000465591 KANSL3Q9P2N6 904 aa24.07■■□□□ 1.44
LIME1-203ENST00000465591 DNM3Q9UQ16 869 aa24.07■■□□□ 1.44
LIME1-203ENST00000465591 MYH11P35749 1972 aa24.07■■□□□ 1.44
LIME1-203ENST00000465591 PRKCBP05771 671 aa24.06■■□□□ 1.44
LIME1-203ENST00000465591 LIG1P18858 919 aa24.06■■□□□ 1.44
LIME1-203ENST00000465591 SMC1AQ14683 1233 aaKnown RBP24.06■■□□□ 1.44
LIME1-203ENST00000465591 ZRSR1Q15695 479 aaKnown RBP24.06■■□□□ 1.44
LIME1-203ENST00000465591 HYIQ5T013 277 aa24.06■■□□□ 1.44
LIME1-203ENST00000465591 EEF1DP3Q658K8 133 aa24.06■■□□□ 1.44
LIME1-203ENST00000465591 LLGL2Q6P1M3 1020 aa24.06■■□□□ 1.44
LIME1-203ENST00000465591 DDX53Q86TM3 631 aaKnown RBP24.06■■□□□ 1.44
LIME1-203ENST00000465591 COLGALT2Q8IYK4 626 aa24.06■■□□□ 1.44
LIME1-203ENST00000465591 DEPTORQ8TB45 409 aa24.06■■□□□ 1.44
LIME1-203ENST00000465591 PLIN2Q99541 437 aa24.06■■□□□ 1.44
LIME1-203ENST00000465591 C2orf40Q9H1Z8 148 aa24.06■■□□□ 1.44
LIME1-203ENST00000465591 UBN1Q9NPG3 1134 aa24.06■■□□□ 1.44
LIME1-203ENST00000465591 TRIP11Q15643 1979 aa24.05■■□□□ 1.44
LIME1-203ENST00000465591 NRP1O14786 923 aa24.05■■□□□ 1.44
LIME1-203ENST00000465591 CXCL14O95715 111 aa24.05■■□□□ 1.44
LIME1-203ENST00000465591 DSC1Q08554 894 aa24.05■■□□□ 1.44
LIME1-203ENST00000465591 MAPK7Q13164 816 aa24.05■■□□□ 1.44
LIME1-203ENST00000465591 ARL6IP4Q66PJ3 421 aaKnown RBP24.05■■□□□ 1.44
LIME1-203ENST00000465591 RINT1Q6NUQ1 792 aa24.05■■□□□ 1.44
LIME1-203ENST00000465591 TMEM184AQ6ZMB5 413 aa24.05■■□□□ 1.44
LIME1-203ENST00000465591 C1orf186Q6ZWK4 172 aa24.05■■□□□ 1.44
LIME1-203ENST00000465591 KIFAP3Q92845 792 aa24.05■■□□□ 1.44
LIME1-203ENST00000465591 TMEM175Q9BSA9 504 aa24.05■■□□□ 1.44
LIME1-203ENST00000465591 MARCH5Q9NX47 278 aa24.05■■□□□ 1.44
LIME1-203ENST00000465591 KLK14Q9P0G3 267 aa24.05■■□□□ 1.44
LIME1-203ENST00000465591 FAM50BQ9Y247 325 aa24.05■■□□□ 1.44
LIME1-203ENST00000465591 GIT1Q9Y2X7 761 aa24.05■■□□□ 1.44
LIME1-203ENST00000465591 VPS37CA5D8V6 355 aaPredicted RBP24.04■■□□□ 1.44
LIME1-203ENST00000465591 C19orf67A6NJJ6 358 aa24.04■■□□□ 1.44
LIME1-203ENST00000465591 F8W810 466 aa24.04■■□□□ 1.44
LIME1-203ENST00000465591 ACKR2O00590 384 aa24.04■■□□□ 1.44
LIME1-203ENST00000465591 CLASP2O75122 1294 aaKnown RBP24.04■■□□□ 1.44
LIME1-203ENST00000465591 HIP1RO75146 1068 aa24.04■■□□□ 1.44
LIME1-203ENST00000465591 CTSAP10619 480 aa24.04■■□□□ 1.44
LIME1-203ENST00000465591 SSTR3P32745 418 aaPredicted RBP24.04■■□□□ 1.44
LIME1-203ENST00000465591 GRIN1Q05586 938 aa24.04■■□□□ 1.44
LIME1-203ENST00000465591 PRPF4BQ13523 1007 aaKnown RBP24.04■■□□□ 1.44
LIME1-203ENST00000465591 PPP2R5AQ15172 486 aa24.04■■□□□ 1.44
LIME1-203ENST00000465591 MAPK6Q16659 721 aa24.04■■□□□ 1.44
LIME1-203ENST00000465591 ADHFE1Q8IWW8 467 aa24.04■■□□□ 1.44
LIME1-203ENST00000465591 IFT74Q96LB3 600 aa24.04■■□□□ 1.44
LIME1-203ENST00000465591 FAM193BQ96PV7 902 aaPredicted RBP24.04■■□□□ 1.44
LIME1-203ENST00000465591 CXCL16Q9H2A7 254 aa24.04■■□□□ 1.44
LIME1-203ENST00000465591 PRKAG3Q9UGI9 489 aa24.04■■□□□ 1.44
LIME1-203ENST00000465591 FAN1Q9Y2M0 1017 aa24.04■■□□□ 1.44
LIME1-203ENST00000465591 PRG3Q9Y2Y8 225 aaPredicted RBP24.04■■□□□ 1.44
LIME1-203ENST00000465591 USP15Q9Y4E8 981 aaPredicted RBP24.04■■□□□ 1.44
LIME1-203ENST00000465591 ALDH2P05091 517 aa24.03■■□□□ 1.44
LIME1-203ENST00000465591 CA8P35219 290 aa24.03■■□□□ 1.44
LIME1-203ENST00000465591 NT5DC1Q5TFE4 455 aa24.03■■□□□ 1.44
LIME1-203ENST00000465591 SYCE2Q6PIF2 218 aa24.03■■□□□ 1.44
LIME1-203ENST00000465591 BRAPQ7Z569 592 aa24.03■■□□□ 1.44
LIME1-203ENST00000465591 LRRC15Q8TF66 581 aa24.03■■□□□ 1.44
LIME1-203ENST00000465591 PARP2Q9UGN5 583 aa24.03■■□□□ 1.44
LIME1-203ENST00000465591 HCFC2Q9Y5Z7 792 aa24.03■■□□□ 1.44
LIME1-203ENST00000465591 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms