RNA–Protein interactions for RNA: ENST00000464539.1

TNRC6A-205, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 1,853 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-205ENST00000464539 ACTL7BQ9Y614 415 aa12.38□□□□□ -0.43
TNRC6A-205ENST00000464539 NCANO14594 1321 aa12.37□□□□□ -0.43
TNRC6A-205ENST00000464539 NVLO15381 856 aaKnown RBP12.37□□□□□ -0.43
TNRC6A-205ENST00000464539 CREB3O43889 395 aa12.37□□□□□ -0.43
TNRC6A-205ENST00000464539 CCNT1O60563 726 aaKnown RBP12.37□□□□□ -0.43
TNRC6A-205ENST00000464539 PENKP01210 267 aaPredicted RBP12.37□□□□□ -0.43
TNRC6A-205ENST00000464539 PDHA1P08559 390 aa12.37□□□□□ -0.43
TNRC6A-205ENST00000464539 MAGEA8P43361 318 aa12.37□□□□□ -0.43
TNRC6A-205ENST00000464539 PTDSS1P48651 473 aaKnown RBP12.37□□□□□ -0.43
TNRC6A-205ENST00000464539 POLGP54098 1239 aaPredicted RBP12.37□□□□□ -0.43
TNRC6A-205ENST00000464539 PPATQ06203 517 aa12.37□□□□□ -0.43
TNRC6A-205ENST00000464539 STRN3Q13033 797 aa12.37□□□□□ -0.43
TNRC6A-205ENST00000464539 TMEM266Q2M3C6 531 aa12.37□□□□□ -0.43
TNRC6A-205ENST00000464539 MUM1Q2TAK8 710 aa12.37□□□□□ -0.43
TNRC6A-205ENST00000464539 EDRF1Q3B7T1 1238 aa12.37□□□□□ -0.43
TNRC6A-205ENST00000464539 NEK8Q86SG6 692 aa12.37□□□□□ -0.43
TNRC6A-205ENST00000464539 VSIG1Q86XK7 387 aa12.37□□□□□ -0.43
TNRC6A-205ENST00000464539 FAM13CQ8NE31 585 aa12.37□□□□□ -0.43
TNRC6A-205ENST00000464539 EPS8L3Q8TE67 593 aaKnown RBP12.37□□□□□ -0.43
TNRC6A-205ENST00000464539 MAIP1Q8WWC4 291 aa12.37□□□□□ -0.43
TNRC6A-205ENST00000464539 ART4Q93070 314 aa12.37□□□□□ -0.43
TNRC6A-205ENST00000464539 CCDC113Q9H0I3 377 aa12.37□□□□□ -0.43
TNRC6A-205ENST00000464539 TLE6Q9H808 572 aa12.37□□□□□ -0.43
TNRC6A-205ENST00000464539 GPRC5DQ9NZD1 345 aa12.37□□□□□ -0.43
TNRC6A-205ENST00000464539 DLGAP2Q9P1A6 1054 aa12.37□□□□□ -0.43
TNRC6A-205ENST00000464539 DBR1Q9UK59 544 aaKnown RBP12.37□□□□□ -0.43
TNRC6A-205ENST00000464539 USH1CQ9Y6N9 552 aa12.37□□□□□ -0.43
TNRC6A-205ENST00000464539 ATAD5Q96QE3 1844 aa12.37□□□□□ -0.43
TNRC6A-205ENST00000464539 SMIM23A6NLE4 172 aa12.36□□□□□ -0.43
TNRC6A-205ENST00000464539 MAGEB2O15479 319 aa12.36□□□□□ -0.43
TNRC6A-205ENST00000464539 TMEM253P0C7T8 217 aa12.36□□□□□ -0.43
TNRC6A-205ENST00000464539 ALAS1P13196 640 aa12.36□□□□□ -0.43
TNRC6A-205ENST00000464539 UCHL3P15374 230 aa12.36□□□□□ -0.43
TNRC6A-205ENST00000464539 GNA11P29992 359 aa12.36□□□□□ -0.43
TNRC6A-205ENST00000464539 KCNH2Q12809 1159 aa12.36□□□□□ -0.43
TNRC6A-205ENST00000464539 SF3A3Q12874 501 aaKnown RBP eCLIP12.36□□□□□ -0.43
TNRC6A-205ENST00000464539 GRM4Q14833 912 aa12.36□□□□□ -0.43
TNRC6A-205ENST00000464539 GSTA3Q16772 222 aa12.36□□□□□ -0.43
TNRC6A-205ENST00000464539 ZNF568Q3ZCX4 644 aa12.36□□□□□ -0.43
TNRC6A-205ENST00000464539 DPY19L2P1Q6NXN4 242 aa12.36□□□□□ -0.43
TNRC6A-205ENST00000464539 VSTM1Q6UX27 236 aa12.36□□□□□ -0.43
TNRC6A-205ENST00000464539 FRMD5Q7Z6J6 570 aa12.36□□□□□ -0.43
TNRC6A-205ENST00000464539 ECHDC2Q86YB7 292 aa12.36□□□□□ -0.43
TNRC6A-205ENST00000464539 NIM1KQ8IY84 436 aa12.36□□□□□ -0.43
TNRC6A-205ENST00000464539 RFFLQ8WZ73 363 aa12.36□□□□□ -0.43
TNRC6A-205ENST00000464539 DDX12PQ92771 950 aa12.36□□□□□ -0.43
TNRC6A-205ENST00000464539 PNMA5Q96PV4 448 aa12.36□□□□□ -0.43
TNRC6A-205ENST00000464539 TGS1Q96RS0 853 aaKnown RBP12.36□□□□□ -0.43
TNRC6A-205ENST00000464539 GLIS2Q9BZE0 524 aaPredicted RBP12.36□□□□□ -0.43
TNRC6A-205ENST00000464539 BMP2KQ9NSY1 1161 aaPredicted RBP12.36□□□□□ -0.43
TNRC6A-205ENST00000464539 TRIM33Q9UPN9 1127 aa12.36□□□□□ -0.43
TNRC6A-205ENST00000464539 MIF4GDA9UHW6 222 aaKnown RBP12.36□□□□□ -0.43
TNRC6A-205ENST00000464539 CETN3O15182 167 aa12.36□□□□□ -0.43
TNRC6A-205ENST00000464539 TTLL1O95922 423 aa12.36□□□□□ -0.43
TNRC6A-205ENST00000464539 STX2P32856 288 aa12.36□□□□□ -0.43
TNRC6A-205ENST00000464539 TUBP50607 506 aa12.36□□□□□ -0.43
TNRC6A-205ENST00000464539 POLE2P56282 527 aa12.36□□□□□ -0.43
TNRC6A-205ENST00000464539 KPNB1Q14974 876 aaKnown RBP12.36□□□□□ -0.43
TNRC6A-205ENST00000464539 DYMQ7RTS9 669 aa12.36□□□□□ -0.43
TNRC6A-205ENST00000464539 MIPOL1Q8TD10 442 aa12.36□□□□□ -0.43
TNRC6A-205ENST00000464539 GPKOWQ92917 476 aaPredicted RBP eCLIP12.36□□□□□ -0.43
TNRC6A-205ENST00000464539 PTPRN2Q92932 1015 aa12.36□□□□□ -0.43
TNRC6A-205ENST00000464539 RMDN2Q96LZ7 410 aa12.36□□□□□ -0.43
TNRC6A-205ENST00000464539 TUBB6Q9BUF5 446 aa12.36□□□□□ -0.43
TNRC6A-205ENST00000464539 GOLPH3Q9H4A6 298 aa12.36□□□□□ -0.43
TNRC6A-205ENST00000464539 ZWILCHQ9H900 591 aa12.36□□□□□ -0.43
TNRC6A-205ENST00000464539 ZNF408Q9H9D4 720 aa12.36□□□□□ -0.43
TNRC6A-205ENST00000464539 PIDD1Q9HB75 910 aa12.36□□□□□ -0.43
TNRC6A-205ENST00000464539 C6orf50Q9HD87 102 aa12.36□□□□□ -0.43
TNRC6A-205ENST00000464539 NKIRAS1Q9NYS0 192 aa12.36□□□□□ -0.43
TNRC6A-205ENST00000464539 ARMCX3Q9UH62 379 aaPredicted RBP12.36□□□□□ -0.43
TNRC6A-205ENST00000464539 PGAP2Q9UHJ9 254 aa12.36□□□□□ -0.43
TNRC6A-205ENST00000464539 ZMYND8Q9ULU4 1186 aaPredicted RBP12.36□□□□□ -0.43
TNRC6A-205ENST00000464539 NIP7Q9Y221 180 aaKnown RBP eCLIP12.36□□□□□ -0.43
TNRC6A-205ENST00000464539 SYNGAP1Q96PV0 1343 aa12.35□□□□□ -0.43
TNRC6A-205ENST00000464539 SLC26A4O43511 780 aa12.35□□□□□ -0.43
TNRC6A-205ENST00000464539 CTNNA2P26232 953 aa12.35□□□□□ -0.43
TNRC6A-205ENST00000464539 RFC5P40937 340 aa12.35□□□□□ -0.43
TNRC6A-205ENST00000464539 HADHBP55084 474 aaKnown RBP12.35□□□□□ -0.43
TNRC6A-205ENST00000464539 IL9RQ01113 521 aa12.35□□□□□ -0.43
TNRC6A-205ENST00000464539 MGAT5Q09328 741 aa12.35□□□□□ -0.43
TNRC6A-205ENST00000464539 HLFQ16534 295 aa12.35□□□□□ -0.43
TNRC6A-205ENST00000464539 LETM2Q2VYF4 491 aa12.35□□□□□ -0.43
TNRC6A-205ENST00000464539 CRY2Q49AN0 593 aa12.35□□□□□ -0.43
TNRC6A-205ENST00000464539 SBK1Q52WX2 424 aa12.35□□□□□ -0.43
TNRC6A-205ENST00000464539 FAM26FQ5R3K3 315 aa12.35□□□□□ -0.43
TNRC6A-205ENST00000464539 TRIM74Q86UV6 250 aa12.35□□□□□ -0.43
TNRC6A-205ENST00000464539 TRIM73Q86UV7 250 aa12.35□□□□□ -0.43
TNRC6A-205ENST00000464539 LONP2Q86WA8 852 aa12.35□□□□□ -0.43
TNRC6A-205ENST00000464539 ZC3H15Q8WU90 426 aaKnown RBP12.35□□□□□ -0.43
TNRC6A-205ENST00000464539 LZICQ8WZA0 190 aa12.35□□□□□ -0.43
TNRC6A-205ENST00000464539 NCSTNQ92542 709 aa12.35□□□□□ -0.43
TNRC6A-205ENST00000464539 LRRC37BQ96QE4 947 aa12.35□□□□□ -0.43
TNRC6A-205ENST00000464539 MTMR9Q96QG7 549 aa12.35□□□□□ -0.43
TNRC6A-205ENST00000464539 PITPNM3Q9BZ71 974 aa12.35□□□□□ -0.43
TNRC6A-205ENST00000464539 KCNK9Q9NPC2 374 aa12.35□□□□□ -0.43
TNRC6A-205ENST00000464539 PCMTD2Q9NV79 361 aa12.35□□□□□ -0.43
TNRC6A-205ENST00000464539 NR2E1Q9Y466 385 aa12.35□□□□□ -0.43
TNRC6A-205ENST00000464539 PCDHA3Q9Y5H8 950 aa12.35□□□□□ -0.43
TNRC6A-205ENST00000464539 SIGLEC16A6NMB1 481 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms