RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 TCP11Q8WWU5 503 aa19.31■□□□□ 0.68
HMGN1-210ENST00000464078 STAMQ92783 540 aa19.31■□□□□ 0.68
HMGN1-210ENST00000464078 TMEM143Q96AN5 459 aa19.31■□□□□ 0.68
HMGN1-210ENST00000464078 CCDC51Q96ER9 411 aa19.31■□□□□ 0.68
HMGN1-210ENST00000464078 ZNF274Q96GC6 653 aaPredicted RBP19.31■□□□□ 0.68
HMGN1-210ENST00000464078 CEP170P1Q96L14 293 aa19.31■□□□□ 0.68
HMGN1-210ENST00000464078 ZSWIM6Q9HCJ5 1215 aa19.31■□□□□ 0.68
HMGN1-210ENST00000464078 WDR6Q9NNW5 1121 aaKnown RBP19.31■□□□□ 0.68
HMGN1-210ENST00000464078 EPS15L1Q9UBC2 864 aa19.31■□□□□ 0.68
HMGN1-210ENST00000464078 FBXL21Q9UKT6 434 aa19.31■□□□□ 0.68
HMGN1-210ENST00000464078 TDRD15B5MCY1 1934 aaKnown RBP19.31■□□□□ 0.68
HMGN1-210ENST00000464078 CLUHO75153 1309 aa19.3■□□□□ 0.68
HMGN1-210ENST00000464078 TBX3O15119 743 aa19.3■□□□□ 0.68
HMGN1-210ENST00000464078 TEX28O15482 410 aa19.3■□□□□ 0.68
HMGN1-210ENST00000464078 ASAP2O43150 1006 aa19.3■□□□□ 0.68
HMGN1-210ENST00000464078 EPB41L2O43491 1005 aaKnown RBP19.3■□□□□ 0.68
HMGN1-210ENST00000464078 PI15O43692 258 aa19.3■□□□□ 0.68
HMGN1-210ENST00000464078 GLUD1P00367 558 aa19.3■□□□□ 0.68
HMGN1-210ENST00000464078 SRGAP2CP0DJJ0 459 aa19.3■□□□□ 0.68
HMGN1-210ENST00000464078 GLUD2P49448 558 aa19.3■□□□□ 0.68
HMGN1-210ENST00000464078 EMC2Q15006 297 aa19.3■□□□□ 0.68
HMGN1-210ENST00000464078 KIAA0319Q5VV43 1072 aa19.3■□□□□ 0.68
HMGN1-210ENST00000464078 FERMT3Q86UX7 667 aa19.3■□□□□ 0.68
HMGN1-210ENST00000464078 GPR65Q8IYL9 337 aa19.3■□□□□ 0.68
HMGN1-210ENST00000464078 SIX5Q8N196 739 aa19.3■□□□□ 0.68
HMGN1-210ENST00000464078 DTWD2Q8NBA8 298 aa19.3■□□□□ 0.68
HMGN1-210ENST00000464078 RNF149Q8NC42 400 aa19.3■□□□□ 0.68
HMGN1-210ENST00000464078 HDAC7Q8WUI4 952 aa19.3■□□□□ 0.68
HMGN1-210ENST00000464078 AIFM3Q96NN9 605 aa19.3■□□□□ 0.68
HMGN1-210ENST00000464078 LXNQ9BS40 222 aa19.3■□□□□ 0.68
HMGN1-210ENST00000464078 RXFP1Q9HBX9 757 aa19.3■□□□□ 0.68
HMGN1-210ENST00000464078 WNT16Q9UBV4 365 aa19.3■□□□□ 0.68
HMGN1-210ENST00000464078 PRG3Q9Y2Y8 225 aaPredicted RBP19.3■□□□□ 0.68
HMGN1-210ENST00000464078 IPPQ9Y573 584 aa19.3■□□□□ 0.68
HMGN1-210ENST00000464078 ZMYM2Q9UBW7 1377 aa19.3■□□□□ 0.68
HMGN1-210ENST00000464078 OTOGLQ3ZCN5 2332 aa19.29■□□□□ 0.68
HMGN1-210ENST00000464078 ARL5CA6NH57 179 aa19.29■□□□□ 0.68
HMGN1-210ENST00000464078 ERLIN2O94905 339 aa19.29■□□□□ 0.68
HMGN1-210ENST00000464078 ITGA4P13612 1032 aa19.29■□□□□ 0.68
HMGN1-210ENST00000464078 AXLP30530 894 aa19.29■□□□□ 0.68
HMGN1-210ENST00000464078 YWHABP31946 246 aaKnown RBP19.29■□□□□ 0.68
HMGN1-210ENST00000464078 AK2P54819 239 aa19.29■□□□□ 0.68
HMGN1-210ENST00000464078 ANGPT1Q15389 498 aa19.29■□□□□ 0.68
HMGN1-210ENST00000464078 NOTUMQ6P988 496 aa19.29■□□□□ 0.68
HMGN1-210ENST00000464078 CPLX2Q6PUV4 134 aaKnown RBP19.29■□□□□ 0.68
HMGN1-210ENST00000464078 NEK8Q86SG6 692 aa19.29■□□□□ 0.68
HMGN1-210ENST00000464078 IFNLR1Q8IU57 520 aaPredicted RBP19.29■□□□□ 0.68
HMGN1-210ENST00000464078 NXPE3Q969Y0 559 aa19.29■□□□□ 0.68
HMGN1-210ENST00000464078 DMXL1Q9Y485 3027 aa19.29■□□□□ 0.68
HMGN1-210ENST00000464078 MTCL1Q9Y4B5 1905 aaKnown RBP19.29■□□□□ 0.68
HMGN1-210ENST00000464078 CEP250Q9BV73 2442 aa19.28■□□□□ 0.68
HMGN1-210ENST00000464078 C2CD2LO14523 706 aa19.28■□□□□ 0.68
HMGN1-210ENST00000464078 TSPAN1O60635 241 aa19.28■□□□□ 0.68
HMGN1-210ENST00000464078 DSG1Q02413 1049 aa19.28■□□□□ 0.68
HMGN1-210ENST00000464078 POU5F1BQ06416 359 aa19.28■□□□□ 0.68
HMGN1-210ENST00000464078 SPIRE1Q08AE8 756 aa19.28■□□□□ 0.68
HMGN1-210ENST00000464078 EPHA7Q15375 998 aa19.28■□□□□ 0.68
HMGN1-210ENST00000464078 OTUD6AQ7L8S5 288 aa19.28■□□□□ 0.68
HMGN1-210ENST00000464078 ERMP1Q7Z2K6 904 aa19.28■□□□□ 0.68
HMGN1-210ENST00000464078 HAS1Q92839 578 aa19.28■□□□□ 0.68
HMGN1-210ENST00000464078 PHF20Q9BVI0 1012 aa19.28■□□□□ 0.68
HMGN1-210ENST00000464078 CHST7Q9NS84 486 aa19.28■□□□□ 0.68
HMGN1-210ENST00000464078 FRYLO94915 3013 aa19.28■□□□□ 0.68
HMGN1-210ENST00000464078 CCDC195A0A1B0GUA6 201 aa19.27■□□□□ 0.68
HMGN1-210ENST00000464078 CCDC194A0A1B0GVG4 234 aa19.27■□□□□ 0.68
HMGN1-210ENST00000464078 NARSO43776 548 aaKnown RBP19.27■□□□□ 0.68
HMGN1-210ENST00000464078 MLH1P40692 756 aa19.27■□□□□ 0.68
HMGN1-210ENST00000464078 PTENP60484 403 aa19.27■□□□□ 0.68
HMGN1-210ENST00000464078 MXD4Q14582 209 aaPredicted RBP19.27■□□□□ 0.68
HMGN1-210ENST00000464078 TAS1R1Q7RTX1 841 aa19.27■□□□□ 0.68
HMGN1-210ENST00000464078 ADSSL1Q8N142 457 aa19.27■□□□□ 0.68
HMGN1-210ENST00000464078 ZNF707Q96C28 371 aaPredicted RBP19.27■□□□□ 0.68
HMGN1-210ENST00000464078 GAD1Q99259 594 aa19.27■□□□□ 0.68
HMGN1-210ENST00000464078 NAP1L4Q99733 375 aaKnown RBP19.27■□□□□ 0.68
HMGN1-210ENST00000464078 EIF2AQ9BY44 585 aaKnown RBP19.27■□□□□ 0.68
HMGN1-210ENST00000464078 TM6SF1Q9BZW5 370 aa19.27■□□□□ 0.68
HMGN1-210ENST00000464078 SLKQ9H2G2 1235 aaPredicted RBP19.27■□□□□ 0.68
HMGN1-210ENST00000464078 PLEKHA4Q9H4M7 779 aa19.27■□□□□ 0.68
HMGN1-210ENST00000464078 ZSWIM4Q9H7M6 989 aa19.27■□□□□ 0.68
HMGN1-210ENST00000464078 CYP46A1Q9Y6A2 500 aa19.27■□□□□ 0.68
HMGN1-210ENST00000464078 RFPL2O75678 378 aa19.26■□□□□ 0.67
HMGN1-210ENST00000464078 SRFP11831 508 aa19.26■□□□□ 0.67
HMGN1-210ENST00000464078 GBP2P32456 591 aaPredicted RBP19.26■□□□□ 0.67
HMGN1-210ENST00000464078 OR1G1P47890 313 aa19.26■□□□□ 0.67
HMGN1-210ENST00000464078 SMG7Q92540 1137 aaKnown RBP19.26■□□□□ 0.67
HMGN1-210ENST00000464078 ZFP42Q96MM3 310 aa19.26■□□□□ 0.67
HMGN1-210ENST00000464078 MYADMQ96S97 322 aa19.26■□□□□ 0.67
HMGN1-210ENST00000464078 MTRQ99707 1265 aa19.26■□□□□ 0.67
HMGN1-210ENST00000464078 CSRNP2Q9H175 543 aa19.26■□□□□ 0.67
HMGN1-210ENST00000464078 RNF39Q9H2S5 420 aa19.26■□□□□ 0.67
HMGN1-210ENST00000464078 SEMA4AQ9H3S1 761 aa19.26■□□□□ 0.67
HMGN1-210ENST00000464078 XPNPEP1Q9NQW7 623 aa19.26■□□□□ 0.67
HMGN1-210ENST00000464078 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.26■□□□□ 0.67
HMGN1-210ENST00000464078 BMP2KQ9NSY1 1161 aaPredicted RBP19.26■□□□□ 0.67
HMGN1-210ENST00000464078 ZDHHC7Q9NXF8 308 aa19.26■□□□□ 0.67
HMGN1-210ENST00000464078 KCNJ14Q9UNX9 436 aa19.26■□□□□ 0.67
HMGN1-210ENST00000464078 STK36Q9NRP7 1315 aa19.25■□□□□ 0.67
HMGN1-210ENST00000464078 KRBA1A5PL33 1030 aa19.25■□□□□ 0.67
HMGN1-210ENST00000464078 NR1I2O75469 434 aa19.25■□□□□ 0.67
HMGN1-210ENST00000464078 SCNN1GP51170 649 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms