RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 A0A1W2PR48 441 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 HOXC11O43248 304 aaPredicted RBP3.6□□□□□ -1.83
SMC4-203ENST00000462668 DGKIO75912 1065 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 MAP4P27816 1152 aaKnown RBP3.6□□□□□ -1.83
SMC4-203ENST00000462668 IL10RAQ13651 578 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 TRIM14Q14142 442 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 FAM133BQ5BKY9 247 aaKnown RBP3.6□□□□□ -1.83
SMC4-203ENST00000462668 TTC38Q5R3I4 469 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 FKBP15Q5T1M5 1219 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 HLA-DQA1Q5Y7H0 255 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 DAAM2Q86T65 1068 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 LRRTM4Q86VH4 590 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 FBLIM1Q8WUP2 373 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 RSC1A1Q92681 617 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 NT5C1BQ96P26 610 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 FOXP3Q9BZS1 431 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 EPB41L4AQ9HCS5 686 aaPredicted RBP3.6□□□□□ -1.83
SMC4-203ENST00000462668 SSU72Q9NP77 194 aaKnown RBP3.6□□□□□ -1.83
SMC4-203ENST00000462668 PLSCR4Q9NRQ2 329 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.6□□□□□ -1.83
SMC4-203ENST00000462668 STK32BQ9NY57 414 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 HDAC9Q9UKV0 1011 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 MED16Q9Y2X0 877 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 A0A087WZ62 844 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 A0A087X0M5 115 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 A0A1B0GX30 115 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 TRIM43BA6NCK2 446 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 WASH4PA8MWX3 477 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 MEIS1O00470 390 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 ARHGAP6O43182 974 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 SRGAP3O43295 1099 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 FTH1P19P0C7X4 201 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 COL6A2P12110 1019 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 ALDH1L2Q3SY69 923 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 UBXN11Q5T124 520 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 SYTL1Q8IYJ3 562 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 ATP11CQ8NB49 1132 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 NETO2Q8NC67 525 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 CREB3L4Q8TEY5 395 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 TRIM43Q96BQ3 446 aaPredicted RBP3.6□□□□□ -1.83
SMC4-203ENST00000462668 MAP6Q96JE9 813 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 KCNJ15Q99712 375 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 APOL5Q9BWW9 433 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 ANO3Q9BYT9 981 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 PCDHGB2Q9Y5G2 931 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 RRN3P2A6NIE6 340 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 GNB5O14775 395 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 PLOD3O60568 738 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 LPLP06858 475 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 HARSP12081 509 aaKnown RBP3.6□□□□□ -1.83
SMC4-203ENST00000462668 KRT15P19012 456 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 RAB6AP20340 208 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 CST5P28325 142 aaPredicted RBP3.6□□□□□ -1.83
SMC4-203ENST00000462668 LIFRP42702 1097 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 CDC42EP1Q00587 391 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 DBPQ10586 325 aaPredicted RBP3.6□□□□□ -1.83
SMC4-203ENST00000462668 CPSF6Q16630 551 aaKnown RBP eCLIP3.6□□□□□ -1.834e-6■■■□□ 15.6
SMC4-203ENST00000462668 TRIM60Q495X7 471 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 C19orf54Q5BKX5 351 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 MOGAT3Q86VF5 341 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 CLEC10AQ8IUN9 316 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 FANCBQ8NB91 859 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 C3orf20Q8ND61 904 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 IFI44Q8TCB0 444 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 MYL10Q9BUA6 226 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 LMAN2LQ9H0V9 348 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 ASCC2Q9H1I8 757 aaPredicted RBP3.6□□□□□ -1.83
SMC4-203ENST00000462668 SRP68Q9UHB9 627 aaKnown RBP3.6□□□□□ -1.83
SMC4-203ENST00000462668 NUB1Q9Y5A7 615 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 EIF4G1Q04637 1599 aaKnown RBP3.6□□□□□ -1.83
SMC4-203ENST00000462668 TCRBV5S2A0A599 114 aa3.59□□□□□ -1.83
SMC4-203ENST00000462668 KCNK3O14649 394 aa3.59□□□□□ -1.83
SMC4-203ENST00000462668 CUTAO60888 179 aa3.59□□□□□ -1.83
SMC4-203ENST00000462668 SKAP2O75563 359 aaPredicted RBP3.59□□□□□ -1.83
SMC4-203ENST00000462668 KRT37O76014 449 aa3.59□□□□□ -1.83
SMC4-203ENST00000462668 CBX7O95931 251 aa3.59□□□□□ -1.83
SMC4-203ENST00000462668 PYGLP06737 847 aa3.59□□□□□ -1.83
SMC4-203ENST00000462668 FAHP16930 419 aa3.59□□□□□ -1.83
SMC4-203ENST00000462668 RAD52P43351 418 aa3.59□□□□□ -1.83
SMC4-203ENST00000462668 NR1H2P55055 460 aa3.59□□□□□ -1.83
SMC4-203ENST00000462668 L1TD1Q5T7N2 865 aaKnown RBP3.59□□□□□ -1.83
SMC4-203ENST00000462668 ZNF385CQ66K41 422 aaPredicted RBP3.59□□□□□ -1.83
SMC4-203ENST00000462668 TMC6Q7Z403 805 aa3.59□□□□□ -1.83
SMC4-203ENST00000462668 ANKS1BQ7Z6G8 1248 aa3.59□□□□□ -1.83
SMC4-203ENST00000462668 WFDC3Q8IUB2 231 aa3.59□□□□□ -1.83
SMC4-203ENST00000462668 BCL6BQ8N143 479 aaPredicted RBP3.59□□□□□ -1.83
SMC4-203ENST00000462668 CAMKK1Q8N5S9 505 aa3.59□□□□□ -1.83
SMC4-203ENST00000462668 HDAC10Q969S8 669 aa3.59□□□□□ -1.83
SMC4-203ENST00000462668 NEIL1Q96FI4 390 aaPredicted RBP3.59□□□□□ -1.83
SMC4-203ENST00000462668 SLC2A13Q96QE2 648 aa3.59□□□□□ -1.83
SMC4-203ENST00000462668 JMJD8Q96S16 334 aa3.59□□□□□ -1.83
SMC4-203ENST00000462668 AMNQ9BXJ7 453 aa3.59□□□□□ -1.83
SMC4-203ENST00000462668 OSBPL6Q9BZF3 934 aa3.59□□□□□ -1.83
SMC4-203ENST00000462668 C22orf46C9J442 243 aa3.59□□□□□ -1.83
SMC4-203ENST00000462668 DHHO43323 396 aa3.59□□□□□ -1.83
SMC4-203ENST00000462668 FLT3LGP49771 235 aa3.59□□□□□ -1.83
SMC4-203ENST00000462668 PFKPQ01813 784 aa3.59□□□□□ -1.83
SMC4-203ENST00000462668 TCF15Q12870 199 aa3.59□□□□□ -1.83
SMC4-203ENST00000462668 BMP8AQ7Z5Y6 402 aa3.59□□□□□ -1.83
SMC4-203ENST00000462668 PDILTQ8N807 584 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms