RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 PPP1R37O75864 691 aa13.49□□□□□ -0.25
COL4A6-204ENST00000461897 SUPT20HL2P0C7V6 817 aa13.49□□□□□ -0.25
COL4A6-204ENST00000461897 NR2F2P24468 414 aa13.49□□□□□ -0.25
COL4A6-204ENST00000461897 NOP2P46087 812 aaKnown RBP13.49□□□□□ -0.25
COL4A6-204ENST00000461897 NAP1L1P55209 391 aaKnown RBP13.49□□□□□ -0.25
COL4A6-204ENST00000461897 GNGT1P63211 74 aa13.49□□□□□ -0.25
COL4A6-204ENST00000461897 XKR9Q5GH70 373 aa13.49□□□□□ -0.25
COL4A6-204ENST00000461897 EEPD1Q7L9B9 569 aa13.49□□□□□ -0.25
COL4A6-204ENST00000461897 LRRC57Q8N9N7 239 aa13.49□□□□□ -0.25
COL4A6-204ENST00000461897 GPRC5AQ8NFJ5 357 aa13.49□□□□□ -0.25
COL4A6-204ENST00000461897 CASKIN2Q8WXE0 1202 aa13.49□□□□□ -0.25
COL4A6-204ENST00000461897 BBXQ8WY36 941 aaPredicted RBP13.49□□□□□ -0.25
COL4A6-204ENST00000461897 CCDC43Q96MW1 224 aaKnown RBP13.49□□□□□ -0.25
COL4A6-204ENST00000461897 STRA6Q9BX79 667 aa13.49□□□□□ -0.25
COL4A6-204ENST00000461897 IKZF4Q9H2S9 585 aa13.49□□□□□ -0.25
COL4A6-204ENST00000461897 EPB41L5Q9HCM4 733 aa13.49□□□□□ -0.25
COL4A6-204ENST00000461897 TYW1Q9NV66 732 aaKnown RBP13.49□□□□□ -0.25
COL4A6-204ENST00000461897 INTUQ9ULD6 942 aa13.49□□□□□ -0.25
COL4A6-204ENST00000461897 NFU1Q9UMS0 254 aa13.49□□□□□ -0.25
COL4A6-204ENST00000461897 UBE4BO95155 1302 aa13.49□□□□□ -0.25
COL4A6-204ENST00000461897 A0A0A6YYK5 440 aaPredicted RBP13.48□□□□□ -0.25
COL4A6-204ENST00000461897 GTPBP10A4D1E9 387 aaKnown RBP13.48□□□□□ -0.25
COL4A6-204ENST00000461897 SLC16A3O15427 465 aaKnown RBP13.48□□□□□ -0.25
COL4A6-204ENST00000461897 TGFB1I1O43294 461 aa13.48□□□□□ -0.25
COL4A6-204ENST00000461897 FARP2O94887 1054 aaPredicted RBP13.48□□□□□ -0.25
COL4A6-204ENST00000461897 KIF4AO95239 1232 aa13.48□□□□□ -0.25
COL4A6-204ENST00000461897 ATG7O95352 703 aa13.48□□□□□ -0.25
COL4A6-204ENST00000461897 FTCDO95954 541 aa13.48□□□□□ -0.25
COL4A6-204ENST00000461897 FAM153BP0C7A2 387 aa13.48□□□□□ -0.25
COL4A6-204ENST00000461897 MRPS25P82663 173 aaKnown RBP13.48□□□□□ -0.25
COL4A6-204ENST00000461897 PRKCEQ02156 737 aa13.48□□□□□ -0.25
COL4A6-204ENST00000461897 GUCY2DQ02846 1103 aa13.48□□□□□ -0.25
COL4A6-204ENST00000461897 FAM153CQ494X1 144 aa13.48□□□□□ -0.25
COL4A6-204ENST00000461897 CFAP58Q5T655 872 aa13.48□□□□□ -0.25
COL4A6-204ENST00000461897 LRIG3Q6UXM1 1119 aa13.48□□□□□ -0.25
COL4A6-204ENST00000461897 SLFN11Q7Z7L1 901 aa13.48□□□□□ -0.25
COL4A6-204ENST00000461897 TADA2BQ86TJ2 420 aa13.48□□□□□ -0.25
COL4A6-204ENST00000461897 SPATS2Q86XZ4 545 aaKnown RBP13.48□□□□□ -0.25
COL4A6-204ENST00000461897 KSR1Q8IVT5 923 aa13.48□□□□□ -0.25
COL4A6-204ENST00000461897 PTPN18Q99952 460 aa13.48□□□□□ -0.25
COL4A6-204ENST00000461897 HINFPQ9BQA5 517 aa13.48□□□□□ -0.25
COL4A6-204ENST00000461897 ISCUQ9H1K1 167 aa13.48□□□□□ -0.25
COL4A6-204ENST00000461897 GPRC5CQ9NQ84 441 aa13.48□□□□□ -0.25
COL4A6-204ENST00000461897 ADAMTS1Q9UHI8 967 aa13.48□□□□□ -0.25
COL4A6-204ENST00000461897 FAM153AQ9UHL3 310 aa13.48□□□□□ -0.25
COL4A6-204ENST00000461897 GFPT2O94808 682 aa13.48□□□□□ -0.25
COL4A6-204ENST00000461897 ARIH2O95376 493 aa13.48□□□□□ -0.25
COL4A6-204ENST00000461897 AFPP02771 609 aaKnown RBP13.48□□□□□ -0.25
COL4A6-204ENST00000461897 UCHL3P15374 230 aa13.48□□□□□ -0.25
COL4A6-204ENST00000461897 PTK2Q05397 1052 aa13.48□□□□□ -0.25
COL4A6-204ENST00000461897 CUL1Q13616 776 aa13.48□□□□□ -0.25
COL4A6-204ENST00000461897 RPS6KA1Q15418 735 aa13.48□□□□□ -0.25
COL4A6-204ENST00000461897 MIS18BP1Q6P0N0 1132 aa13.48□□□□□ -0.25
COL4A6-204ENST00000461897 ZNF571Q7Z3V5 609 aaPredicted RBP13.48□□□□□ -0.25
COL4A6-204ENST00000461897 BCAS4Q8TDM0 211 aa13.48□□□□□ -0.25
COL4A6-204ENST00000461897 KRT12Q99456 494 aa13.48□□□□□ -0.25
COL4A6-204ENST00000461897 TIPINQ9BVW5 301 aa13.48□□□□□ -0.25
COL4A6-204ENST00000461897 PACSIN1Q9BY11 444 aa13.48□□□□□ -0.25
COL4A6-204ENST00000461897 PLEKHA4Q9H4M7 779 aa13.48□□□□□ -0.25
COL4A6-204ENST00000461897 METTL14Q9HCE5 456 aaKnown RBP13.48□□□□□ -0.25
COL4A6-204ENST00000461897 LARSQ9P2J5 1176 aaKnown RBP13.48□□□□□ -0.25
COL4A6-204ENST00000461897 ARMCX3Q9UH62 379 aaPredicted RBP13.48□□□□□ -0.25
COL4A6-204ENST00000461897 RAD51CO43502 376 aa13.47□□□□□ -0.25
COL4A6-204ENST00000461897 CALUO43852 315 aaPredicted RBP13.47□□□□□ -0.25
COL4A6-204ENST00000461897 DKC1O60832 514 aaKnown RBP eCLIP13.47□□□□□ -0.25
COL4A6-204ENST00000461897 NR3C1P04150 777 aa13.47□□□□□ -0.25
COL4A6-204ENST00000461897 PLS3P13797 630 aa13.47□□□□□ -0.25
COL4A6-204ENST00000461897 CCT5P48643 541 aa13.47□□□□□ -0.25
COL4A6-204ENST00000461897 JAM2P57087 298 aa13.47□□□□□ -0.25
COL4A6-204ENST00000461897 NFIL3Q16649 462 aa13.47□□□□□ -0.25
COL4A6-204ENST00000461897 TTC31Q49AM3 519 aaPredicted RBP13.47□□□□□ -0.25
COL4A6-204ENST00000461897 MORC4Q8TE76 937 aa13.47□□□□□ -0.25
COL4A6-204ENST00000461897 TAF4BQ92750 862 aa13.47□□□□□ -0.25
COL4A6-204ENST00000461897 MORF4L1Q9UBU8 362 aa13.47□□□□□ -0.25
COL4A6-204ENST00000461897 NAGPAQ9UK23 515 aa13.47□□□□□ -0.25
COL4A6-204ENST00000461897 MAFBQ9Y5Q3 323 aaPredicted RBP13.47□□□□□ -0.25
COL4A6-204ENST00000461897 IGKV6D-21A0A0A0MT36 114 aa13.46□□□□□ -0.25
COL4A6-204ENST00000461897 HMGB1P1B2RPK0 211 aaPredicted RBP13.46□□□□□ -0.25
COL4A6-204ENST00000461897 K7ENM7 598 aa13.46□□□□□ -0.25
COL4A6-204ENST00000461897 TGFB3P10600 412 aa13.46□□□□□ -0.25
COL4A6-204ENST00000461897 ATP4AP20648 1035 aa13.46□□□□□ -0.25
COL4A6-204ENST00000461897 PON1P27169 355 aa13.46□□□□□ -0.25
COL4A6-204ENST00000461897 ECHS1P30084 290 aa13.46□□□□□ -0.25
COL4A6-204ENST00000461897 GCLCP48506 637 aaPredicted RBP13.46□□□□□ -0.25
COL4A6-204ENST00000461897 HUNKP57058 714 aa13.46□□□□□ -0.25
COL4A6-204ENST00000461897 CCNA1P78396 465 aa13.46□□□□□ -0.25
COL4A6-204ENST00000461897 LY6KQ17RY6 165 aa13.46□□□□□ -0.25
COL4A6-204ENST00000461897 CHADLQ6NUI6 762 aa13.46□□□□□ -0.25
COL4A6-204ENST00000461897 OTUD6AQ7L8S5 288 aa13.46□□□□□ -0.25
COL4A6-204ENST00000461897 PACS2Q86VP3 889 aa13.46□□□□□ -0.25
COL4A6-204ENST00000461897 GPIHBP1Q8IV16 184 aa13.46□□□□□ -0.25
COL4A6-204ENST00000461897 FBXO16Q8IX29 292 aaPredicted RBP13.46□□□□□ -0.25
COL4A6-204ENST00000461897 RASGEF1CQ8N431 466 aa13.46□□□□□ -0.25
COL4A6-204ENST00000461897 CEP170P1Q96L14 293 aa13.46□□□□□ -0.25
COL4A6-204ENST00000461897 MPHOSPH6Q99547 160 aaKnown RBP13.46□□□□□ -0.25
COL4A6-204ENST00000461897 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.46□□□□□ -0.25
COL4A6-204ENST00000461897 SEPT9Q9UHD8 586 aaPredicted RBP13.46□□□□□ -0.25
COL4A6-204ENST00000461897 STXBP5LQ9Y2K9 1186 aa13.46□□□□□ -0.25
COL4A6-204ENST00000461897 FAM169AQ9Y6X4 670 aa13.46□□□□□ -0.25
COL4A6-204ENST00000461897 PCNTO95613 3336 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms