RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 NRDE2Q9H7Z3 1164 aa17■□□□□ 0.31
VARS-219ENST00000461328 NGRNQ9NPE2 291 aaKnown RBP17■□□□□ 0.31
VARS-219ENST00000461328 UBN1Q9NPG3 1134 aa17■□□□□ 0.31
VARS-219ENST00000461328 PRMT7Q9NVM4 692 aaPredicted RBP17■□□□□ 0.31
VARS-219ENST00000461328 KANSL3Q9P2N6 904 aa17■□□□□ 0.31
VARS-219ENST00000461328 CLIC4Q9Y696 253 aa17■□□□□ 0.31
VARS-219ENST00000461328 B4GALT5O43286 388 aa16.99■□□□□ 0.31
VARS-219ENST00000461328 MBTPS2O43462 519 aa16.99■□□□□ 0.31
VARS-219ENST00000461328 ARF4P18085 180 aaPredicted RBP16.99■□□□□ 0.31
VARS-219ENST00000461328 CA8P35219 290 aa16.99■□□□□ 0.31
VARS-219ENST00000461328 SMAD4Q13485 552 aaKnown RBP16.99■□□□□ 0.31
VARS-219ENST00000461328 SMC1AQ14683 1233 aaKnown RBP16.99■□□□□ 0.31
VARS-219ENST00000461328 BMS1Q14692 1282 aaKnown RBP16.99■□□□□ 0.31
VARS-219ENST00000461328 CDCA2Q69YH5 1023 aaPredicted RBP16.99■□□□□ 0.31
VARS-219ENST00000461328 KCNK18Q7Z418 384 aa16.99■□□□□ 0.31
VARS-219ENST00000461328 HACE1Q8IYU2 909 aa16.99■□□□□ 0.31
VARS-219ENST00000461328 GJD3Q8N144 294 aa16.99■□□□□ 0.31
VARS-219ENST00000461328 SPRYD3Q8NCJ5 442 aa16.99■□□□□ 0.31
VARS-219ENST00000461328 SMG8Q8ND04 991 aaKnown RBP16.99■□□□□ 0.31
VARS-219ENST00000461328 FAM193BQ96PV7 902 aaPredicted RBP16.99■□□□□ 0.31
VARS-219ENST00000461328 KIFC3Q9BVG8 833 aa16.99■□□□□ 0.31
VARS-219ENST00000461328 ZSCAN16Q9H4T2 348 aaPredicted RBP16.99■□□□□ 0.31
VARS-219ENST00000461328 POLD4Q9HCU8 107 aa16.99■□□□□ 0.31
VARS-219ENST00000461328 BARX2Q9UMQ3 279 aaPredicted RBP16.99■□□□□ 0.31
VARS-219ENST00000461328 IPPQ9Y573 584 aa16.99■□□□□ 0.31
VARS-219ENST00000461328 BDP1A6H8Y1 2624 aa16.98■□□□□ 0.31
VARS-219ENST00000461328 CCDC169A6NNP5 214 aa16.98■□□□□ 0.31
VARS-219ENST00000461328 HIP1RO75146 1068 aa16.98■□□□□ 0.31
VARS-219ENST00000461328 GLP2RO95838 553 aa16.98■□□□□ 0.31
VARS-219ENST00000461328 POMCP01189 267 aa16.98■□□□□ 0.31
VARS-219ENST00000461328 PRKCBP05771 671 aa16.98■□□□□ 0.31
VARS-219ENST00000461328 GALTP07902 379 aa16.98■□□□□ 0.31
VARS-219ENST00000461328 MARCKSP29966 332 aaPredicted RBP16.98■□□□□ 0.31
VARS-219ENST00000461328 LONP1P36776 959 aaKnown RBP16.98■□□□□ 0.31
VARS-219ENST00000461328 SLC11A1P49279 550 aa16.98■□□□□ 0.31
VARS-219ENST00000461328 DMP1Q13316 513 aaPredicted RBP16.98■□□□□ 0.31
VARS-219ENST00000461328 MAPK6Q16659 721 aa16.98■□□□□ 0.31
VARS-219ENST00000461328 HYIQ5T013 277 aa16.98■□□□□ 0.31
VARS-219ENST00000461328 FOXD4L5Q5VV16 416 aaPredicted RBP16.98■□□□□ 0.31
VARS-219ENST00000461328 TMEM173Q86WV6 379 aaPredicted RBP16.98■□□□□ 0.31
VARS-219ENST00000461328 FOXD4L4Q8WXT5 416 aaPredicted RBP16.98■□□□□ 0.31
VARS-219ENST00000461328 MSLNLQ96KJ4 702 aa16.98■□□□□ 0.31
VARS-219ENST00000461328 DRC1Q96MC2 740 aa16.98■□□□□ 0.31
VARS-219ENST00000461328 PNMA5Q96PV4 448 aa16.98■□□□□ 0.31
VARS-219ENST00000461328 RUSC1Q9BVN2 902 aa16.98■□□□□ 0.31
VARS-219ENST00000461328 APOL6Q9BWW8 343 aa16.98■□□□□ 0.31
VARS-219ENST00000461328 CD320Q9NPF0 282 aa16.98■□□□□ 0.31
VARS-219ENST00000461328 CLEC1BQ9P126 229 aa16.98■□□□□ 0.31
VARS-219ENST00000461328 DNAJB4Q9UDY4 337 aa16.98■□□□□ 0.31
VARS-219ENST00000461328 PRKAG3Q9UGI9 489 aa16.98■□□□□ 0.31
VARS-219ENST00000461328 NCOR1O75376 2440 aa16.97■□□□□ 0.31
VARS-219ENST00000461328 HIDE1A8MVS5 230 aa16.97■□□□□ 0.31
VARS-219ENST00000461328 SLC26A4O43511 780 aa16.97■□□□□ 0.31
VARS-219ENST00000461328 NPTXRO95502 500 aa16.97■□□□□ 0.31
VARS-219ENST00000461328 PLA2G4BP0C869 781 aa16.97■□□□□ 0.31
VARS-219ENST00000461328 SRGAP2BP0DMP2 458 aa16.97■□□□□ 0.31
VARS-219ENST00000461328 MLH1P40692 756 aa16.97■□□□□ 0.31
VARS-219ENST00000461328 AFF1P51825 1210 aaKnown RBP16.97■□□□□ 0.31
VARS-219ENST00000461328 RAD51AP2Q09MP3 1159 aa16.97■□□□□ 0.31
VARS-219ENST00000461328 PRPF4BQ13523 1007 aaKnown RBP16.97■□□□□ 0.31
VARS-219ENST00000461328 TMEM119Q4V9L6 283 aa16.97■□□□□ 0.31
VARS-219ENST00000461328 RINT1Q6NUQ1 792 aa16.97■□□□□ 0.31
VARS-219ENST00000461328 SLC27A1Q6PCB7 646 aa16.97■□□□□ 0.31
VARS-219ENST00000461328 CDR2LQ86X02 465 aaPredicted RBP16.97■□□□□ 0.31
VARS-219ENST00000461328 ZNF280BQ86YH2 543 aa16.97■□□□□ 0.31
VARS-219ENST00000461328 VPS52Q8N1B4 723 aa16.97■□□□□ 0.31
VARS-219ENST00000461328 IGSF21Q96ID5 467 aa16.97■□□□□ 0.31
VARS-219ENST00000461328 PRIMPOLQ96LW4 560 aa16.97■□□□□ 0.31
VARS-219ENST00000461328 NXF3Q9H4D5 531 aaKnown RBP16.97■□□□□ 0.31
VARS-219ENST00000461328 HES2Q9Y543 173 aa16.97■□□□□ 0.31
VARS-219ENST00000461328 N4BP3O15049 544 aa16.96■□□□□ 0.31
VARS-219ENST00000461328 DDHD2O94830 711 aa16.96■□□□□ 0.31
VARS-219ENST00000461328 TXLNAP40222 546 aa16.96■□□□□ 0.31
VARS-219ENST00000461328 EFNA5P52803 228 aa16.96■□□□□ 0.31
VARS-219ENST00000461328 PEX3P56589 373 aa16.96■□□□□ 0.31
VARS-219ENST00000461328 RBM10P98175 930 aaKnown RBP16.96■□□□□ 0.31
VARS-219ENST00000461328 GRIN1Q05586 938 aa16.96■□□□□ 0.31
VARS-219ENST00000461328 COASYQ13057 564 aa16.96■□□□□ 0.31
VARS-219ENST00000461328 KARSQ15046 597 aaKnown RBP16.96■□□□□ 0.31
VARS-219ENST00000461328 SMAD2Q15796 467 aaKnown RBP16.96■□□□□ 0.31
VARS-219ENST00000461328 LLGL2Q6P1M3 1020 aa16.96■□□□□ 0.31
VARS-219ENST00000461328 PPP4R3CPQ6ZMV5 832 aa16.96■□□□□ 0.31
VARS-219ENST00000461328 KCTD17Q8N5Z5 321 aa16.96■□□□□ 0.31
VARS-219ENST00000461328 MRPL43Q8N983 215 aaKnown RBP16.96■□□□□ 0.31
VARS-219ENST00000461328 TMEM87AQ8NBN3 555 aa16.96■□□□□ 0.31
VARS-219ENST00000461328 SMRP1Q8NCR6 262 aa16.96■□□□□ 0.31
VARS-219ENST00000461328 VN1R2Q8NFZ6 395 aa16.96■□□□□ 0.31
VARS-219ENST00000461328 GAD1Q99259 594 aa16.96■□□□□ 0.31
VARS-219ENST00000461328 TMEM175Q9BSA9 504 aa16.96■□□□□ 0.31
VARS-219ENST00000461328 TIPINQ9BVW5 301 aa16.96■□□□□ 0.31
VARS-219ENST00000461328 RNF39Q9H2S5 420 aa16.96■□□□□ 0.31
VARS-219ENST00000461328 A0A1B0GUA9 196 aa16.95■□□□□ 0.3
VARS-219ENST00000461328 C2orf71A6NGG8 1288 aa16.95■□□□□ 0.3
VARS-219ENST00000461328 ARL5CA6NH57 179 aa16.95■□□□□ 0.3
VARS-219ENST00000461328 B4GALT3O60512 393 aa16.95■□□□□ 0.3
VARS-219ENST00000461328 CXCL14O95715 111 aa16.95■□□□□ 0.3
VARS-219ENST00000461328 ALDH2P05091 517 aa16.95■□□□□ 0.3
VARS-219ENST00000461328 PLCG1P19174 1290 aa16.95■□□□□ 0.3
VARS-219ENST00000461328 ZP2Q05996 745 aa16.95■□□□□ 0.3
VARS-219ENST00000461328 DHX8Q14562 1220 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms