RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	ADGRE1	Q14246	886 aa		11.3	□□□□□ -0.6
MRPL55-223	ENST00000459783	PCBP1	Q15365	356 aa	Known RBP eCLIP	11.3	□□□□□ -0.6
MRPL55-223	ENST00000459783	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	11.3	□□□□□ -0.6
MRPL55-223	ENST00000459783	ZNF697	Q5TEC3	545 aa		11.3	□□□□□ -0.6
MRPL55-223	ENST00000459783	CNNM4	Q6P4Q7	775 aa		11.3	□□□□□ -0.6
MRPL55-223	ENST00000459783	SLC39A4	Q6P5W5	647 aa		11.3	□□□□□ -0.6
MRPL55-223	ENST00000459783	NOTUM	Q6P988	496 aa		11.3	□□□□□ -0.6
MRPL55-223	ENST00000459783	HAUS6	Q7Z4H7	955 aa		11.3	□□□□□ -0.6
MRPL55-223	ENST00000459783	CMTR2	Q8IYT2	770 aa	Known RBP	11.3	□□□□□ -0.6
MRPL55-223	ENST00000459783	MYCT1	Q8N699	235 aa		11.3	□□□□□ -0.6
MRPL55-223	ENST00000459783	IQUB	Q8NA54	791 aa		11.3	□□□□□ -0.6
MRPL55-223	ENST00000459783	HELQ	Q8TDG4	1101 aa		11.3	□□□□□ -0.6
MRPL55-223	ENST00000459783	ZBTB45	Q96K62	511 aa	Predicted RBP	11.3	□□□□□ -0.6
MRPL55-223	ENST00000459783	IPO9	Q96P70	1041 aa	Known RBP	11.3	□□□□□ -0.6
MRPL55-223	ENST00000459783	ACO2	Q99798	780 aa	Known RBP	11.3	□□□□□ -0.6
MRPL55-223	ENST00000459783	TARS2	Q9BW92	718 aa	Known RBP	11.3	□□□□□ -0.6
MRPL55-223	ENST00000459783	BLZF1	Q9H2G9	400 aa		11.3	□□□□□ -0.6
MRPL55-223	ENST00000459783	TNMD	Q9H2S6	317 aa		11.3	□□□□□ -0.6
MRPL55-223	ENST00000459783	ZHX3	Q9H4I2	956 aa		11.3	□□□□□ -0.6
MRPL55-223	ENST00000459783	PRDM12	Q9H4Q4	367 aa		11.3	□□□□□ -0.6
MRPL55-223	ENST00000459783	DACT1	Q9NYF0	836 aa		11.3	□□□□□ -0.6
MRPL55-223	ENST00000459783	TBC1D7	Q9P0N9	293 aa		11.3	□□□□□ -0.6
MRPL55-223	ENST00000459783	MTUS1	Q9ULD2	1270 aa		11.3	□□□□□ -0.6
MRPL55-223	ENST00000459783	LRFN2	Q9ULH4	789 aa		11.3	□□□□□ -0.6
MRPL55-223	ENST00000459783	PCDHB7	Q9Y5E2	793 aa		11.3	□□□□□ -0.6
MRPL55-223	ENST00000459783	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	11.29	□□□□□ -0.6
MRPL55-223	ENST00000459783	TBKBP1	A7MCY6	615 aa		11.29	□□□□□ -0.6
MRPL55-223	ENST00000459783	TISP43	B9A030	160 aa		11.29	□□□□□ -0.6
MRPL55-223	ENST00000459783		K7ERI5	159 aa		11.29	□□□□□ -0.6
MRPL55-223	ENST00000459783	TRAK2	O60296	914 aa		11.29	□□□□□ -0.6
MRPL55-223	ENST00000459783	TBCA	O75347	108 aa	Known RBP	11.29	□□□□□ -0.6
MRPL55-223	ENST00000459783	EOMES	O95936	686 aa		11.29	□□□□□ -0.6
MRPL55-223	ENST00000459783	SLFN14	P0C7P3	912 aa		11.29	□□□□□ -0.6
MRPL55-223	ENST00000459783	PRR29	P0C7W0	189 aa		11.29	□□□□□ -0.6
MRPL55-223	ENST00000459783	STAG3L1	P0CL83	205 aa		11.29	□□□□□ -0.6
MRPL55-223	ENST00000459783	PROZ	P22891	400 aa		11.29	□□□□□ -0.6
MRPL55-223	ENST00000459783	AFM	P43652	599 aa		11.29	□□□□□ -0.6
MRPL55-223	ENST00000459783	RAB27A	P51159	221 aa		11.29	□□□□□ -0.6
MRPL55-223	ENST00000459783	KCNA1	Q09470	495 aa		11.29	□□□□□ -0.6
MRPL55-223	ENST00000459783	COASY	Q13057	564 aa		11.29	□□□□□ -0.6
MRPL55-223	ENST00000459783	BTG3	Q14201	252 aa	Predicted RBP	11.29	□□□□□ -0.6
MRPL55-223	ENST00000459783	ATF7IP2	Q5U623	682 aa		11.29	□□□□□ -0.6
MRPL55-223	ENST00000459783	SLC27A1	Q6PCB7	646 aa		11.29	□□□□□ -0.6
MRPL55-223	ENST00000459783	CEP120	Q8N960	986 aa		11.29	□□□□□ -0.6
MRPL55-223	ENST00000459783	GSTCD	Q8NEC7	633 aa		11.29	□□□□□ -0.6
MRPL55-223	ENST00000459783	ENGASE	Q8NFI3	743 aa		11.29	□□□□□ -0.6
MRPL55-223	ENST00000459783	MRPS27	Q92552	414 aa	Known RBP	11.29	□□□□□ -0.6
MRPL55-223	ENST00000459783	CLP1	Q92989	425 aa	Known RBP	11.29	□□□□□ -0.6
MRPL55-223	ENST00000459783	CCDC51	Q96ER9	411 aa		11.29	□□□□□ -0.6
MRPL55-223	ENST00000459783	PAGE5	Q96GU1	130 aa		11.29	□□□□□ -0.6
MRPL55-223	ENST00000459783	CDX2	Q99626	313 aa	Predicted RBP	11.29	□□□□□ -0.6
MRPL55-223	ENST00000459783	C7orf25	Q9BPX7	421 aa		11.29	□□□□□ -0.6
MRPL55-223	ENST00000459783	TMEM117	Q9H0C3	514 aa		11.29	□□□□□ -0.6
MRPL55-223	ENST00000459783	CDT1	Q9H211	546 aa		11.29	□□□□□ -0.6
MRPL55-223	ENST00000459783	CUEDC2	Q9H467	287 aa		11.29	□□□□□ -0.6
MRPL55-223	ENST00000459783	CWH43	Q9H720	699 aa		11.29	□□□□□ -0.6
MRPL55-223	ENST00000459783	MIOS	Q9NXC5	875 aa		11.29	□□□□□ -0.6
MRPL55-223	ENST00000459783	LARS	Q9P2J5	1176 aa	Known RBP	11.29	□□□□□ -0.6
MRPL55-223	ENST00000459783	LAMA2	P24043	3122 aa	Known RBP	11.29	□□□□□ -0.6
MRPL55-223	ENST00000459783	ANKRD63	C9JTQ0	380 aa		11.28	□□□□□ -0.6
MRPL55-223	ENST00000459783		K7ENM7	598 aa		11.28	□□□□□ -0.6
MRPL55-223	ENST00000459783	KLRC4	O43908	158 aa		11.28	□□□□□ -0.6
MRPL55-223	ENST00000459783	OFD1	O75665	1012 aa		11.28	□□□□□ -0.6
MRPL55-223	ENST00000459783	MYB	P10242	640 aa		11.28	□□□□□ -0.6
MRPL55-223	ENST00000459783	IDE	P14735	1019 aa		11.28	□□□□□ -0.6
MRPL55-223	ENST00000459783	AKAP5	P24588	427 aa		11.28	□□□□□ -0.6
MRPL55-223	ENST00000459783	SYK	P43405	635 aa		11.28	□□□□□ -0.6
MRPL55-223	ENST00000459783	GTF2B	Q00403	316 aa		11.28	□□□□□ -0.6
MRPL55-223	ENST00000459783	SNW1	Q13573	536 aa	Known RBP	11.28	□□□□□ -0.6
MRPL55-223	ENST00000459783	ZNF720	Q7Z2F6	126 aa		11.28	□□□□□ -0.6
MRPL55-223	ENST00000459783	TMEM192	Q8IY95	271 aa		11.28	□□□□□ -0.6
MRPL55-223	ENST00000459783	FMR1NB	Q8N0W7	255 aa	Predicted RBP	11.28	□□□□□ -0.6
MRPL55-223	ENST00000459783	FIBCD1	Q8N539	461 aa		11.28	□□□□□ -0.6
MRPL55-223	ENST00000459783	TMEM87A	Q8NBN3	555 aa		11.28	□□□□□ -0.6
MRPL55-223	ENST00000459783	MYLIP	Q8WY64	445 aa		11.28	□□□□□ -0.6
MRPL55-223	ENST00000459783	ARNTL2	Q8WYA1	636 aa		11.28	□□□□□ -0.6
MRPL55-223	ENST00000459783	ZFP42	Q96MM3	310 aa		11.28	□□□□□ -0.6
MRPL55-223	ENST00000459783	TGS1	Q96RS0	853 aa	Known RBP	11.28	□□□□□ -0.6
MRPL55-223	ENST00000459783	APOL6	Q9BWW8	343 aa		11.28	□□□□□ -0.6
MRPL55-223	ENST00000459783	ST6GALNAC4	Q9H4F1	302 aa		11.28	□□□□□ -0.6
MRPL55-223	ENST00000459783	TYW1	Q9NV66	732 aa	Known RBP	11.28	□□□□□ -0.6
MRPL55-223	ENST00000459783	PANK4	Q9NVE7	773 aa		11.28	□□□□□ -0.6
MRPL55-223	ENST00000459783	TBX20	Q9UMR3	447 aa		11.28	□□□□□ -0.6
MRPL55-223	ENST00000459783	PLAGL2	Q9UPG8	496 aa		11.28	□□□□□ -0.6
MRPL55-223	ENST00000459783	TNFSF13B	Q9Y275	285 aa		11.28	□□□□□ -0.6
MRPL55-223	ENST00000459783	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	11.27	□□□□□ -0.6
MRPL55-223	ENST00000459783	COL4A4	P53420	1690 aa	Predicted RBP	11.27	□□□□□ -0.6
MRPL55-223	ENST00000459783	COL6A3	P12111	3177 aa		11.27	□□□□□ -0.6
MRPL55-223	ENST00000459783	CUL9	Q8IWT3	2517 aa		11.27	□□□□□ -0.61
MRPL55-223	ENST00000459783	N4BP3	O15049	544 aa		11.27	□□□□□ -0.61
MRPL55-223	ENST00000459783	INPPL1	O15357	1258 aa		11.27	□□□□□ -0.61
MRPL55-223	ENST00000459783	FAM189A1	O60320	539 aa		11.27	□□□□□ -0.61
MRPL55-223	ENST00000459783	PIGR	P01833	764 aa		11.27	□□□□□ -0.61
MRPL55-223	ENST00000459783	GAP43	P17677	238 aa		11.27	□□□□□ -0.61
MRPL55-223	ENST00000459783	HOXD13	P35453	343 aa		11.27	□□□□□ -0.61
MRPL55-223	ENST00000459783	PBX3	P40426	434 aa		11.27	□□□□□ -0.61
MRPL55-223	ENST00000459783	SMTN	P53814	917 aa		11.27	□□□□□ -0.61
MRPL55-223	ENST00000459783	ASIC1	P78348	528 aa		11.27	□□□□□ -0.61
MRPL55-223	ENST00000459783	EPC2	Q52LR7	807 aa		11.27	□□□□□ -0.61
MRPL55-223	ENST00000459783	SEZ6	Q53EL9	994 aa		11.27	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms