RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 CPB2Q96IY4 423 aa19.35■□□□□ 0.69
SCARNA2-201ENST00000458748 ADPGKQ9BRR6 497 aa19.35■□□□□ 0.69
SCARNA2-201ENST00000458748 ZSCAN16Q9H4T2 348 aaPredicted RBP19.35■□□□□ 0.69
SCARNA2-201ENST00000458748 C17orf75Q9HAS0 396 aa19.35■□□□□ 0.69
SCARNA2-201ENST00000458748 ENTPD7Q9NQZ7 604 aa19.35■□□□□ 0.69
SCARNA2-201ENST00000458748 TBC1D13Q9NVG8 400 aa19.35■□□□□ 0.69
SCARNA2-201ENST00000458748 KCND2Q9NZV8 630 aa19.35■□□□□ 0.69
SCARNA2-201ENST00000458748 IPPQ9Y573 584 aa19.35■□□□□ 0.69
SCARNA2-201ENST00000458748 E9PMD0 336 aa19.34■□□□□ 0.69
SCARNA2-201ENST00000458748 N4BP3O15049 544 aa19.34■□□□□ 0.69
SCARNA2-201ENST00000458748 NR1I2O75469 434 aa19.34■□□□□ 0.69
SCARNA2-201ENST00000458748 GTF2F1P35269 517 aaKnown RBP eCLIP19.34■□□□□ 0.69
SCARNA2-201ENST00000458748 NRIP1P48552 1158 aa19.34■□□□□ 0.69
SCARNA2-201ENST00000458748 SF3A1Q15459 793 aaKnown RBP19.34■□□□□ 0.69
SCARNA2-201ENST00000458748 AMHR2Q16671 573 aa19.34■□□□□ 0.69
SCARNA2-201ENST00000458748 AGMOQ6ZNB7 445 aa19.34■□□□□ 0.69
SCARNA2-201ENST00000458748 CABP7Q86V35 215 aa19.34■□□□□ 0.69
SCARNA2-201ENST00000458748 GJD3Q8N144 294 aa19.34■□□□□ 0.69
SCARNA2-201ENST00000458748 MMTAG2Q9BU76 263 aaKnown RBP19.34■□□□□ 0.69
SCARNA2-201ENST00000458748 FZD8Q9H461 694 aa19.34■□□□□ 0.69
SCARNA2-201ENST00000458748 PRKAG3Q9UGI9 489 aa19.34■□□□□ 0.69
SCARNA2-201ENST00000458748 MEIS3P2A8K0S8 358 aa19.33■□□□□ 0.68
SCARNA2-201ENST00000458748 ACKR2O00590 384 aa19.33■□□□□ 0.68
SCARNA2-201ENST00000458748 SSBP05455 408 aaKnown RBP eCLIP19.33■□□□□ 0.68
SCARNA2-201ENST00000458748 PRKCBP05771 671 aa19.33■□□□□ 0.68
SCARNA2-201ENST00000458748 SSTR3P32745 418 aaPredicted RBP19.33■□□□□ 0.68
SCARNA2-201ENST00000458748 PBX3P40426 434 aa19.33■□□□□ 0.68
SCARNA2-201ENST00000458748 NDUFV1P49821 464 aa19.33■□□□□ 0.68
SCARNA2-201ENST00000458748 DLX2Q07687 328 aaPredicted RBP19.33■□□□□ 0.68
SCARNA2-201ENST00000458748 DUSP6Q16828 381 aa19.33■□□□□ 0.68
SCARNA2-201ENST00000458748 TMEM87AQ8NBN3 555 aa19.33■□□□□ 0.68
SCARNA2-201ENST00000458748 TCF25Q9BQ70 676 aa19.33■□□□□ 0.68
SCARNA2-201ENST00000458748 TMEM175Q9BSA9 504 aa19.33■□□□□ 0.68
SCARNA2-201ENST00000458748 LRFN3Q9BTN0 628 aa19.33■□□□□ 0.68
SCARNA2-201ENST00000458748 EIF2AQ9BY44 585 aaKnown RBP19.33■□□□□ 0.68
SCARNA2-201ENST00000458748 NRDE2Q9H7Z3 1164 aa19.33■□□□□ 0.68
SCARNA2-201ENST00000458748 CD207Q9UJ71 328 aa19.33■□□□□ 0.68
SCARNA2-201ENST00000458748 GIT1Q9Y2X7 761 aa19.33■□□□□ 0.68
SCARNA2-201ENST00000458748 RBM19Q9Y4C8 960 aaKnown RBP19.33■□□□□ 0.68
SCARNA2-201ENST00000458748 ZMYM2Q9UBW7 1377 aa19.32■□□□□ 0.68
SCARNA2-201ENST00000458748 FAM86C2PA6NEL3 165 aa19.32■□□□□ 0.68
SCARNA2-201ENST00000458748 CCDC169A6NNP5 214 aa19.32■□□□□ 0.68
SCARNA2-201ENST00000458748 K7ERI5 159 aa19.32■□□□□ 0.68
SCARNA2-201ENST00000458748 INPPL1O15357 1258 aa19.32■□□□□ 0.68
SCARNA2-201ENST00000458748 LINC01565O15544 149 aa19.32■□□□□ 0.68
SCARNA2-201ENST00000458748 B4GALT5O43286 388 aa19.32■□□□□ 0.68
SCARNA2-201ENST00000458748 STX6O43752 255 aa19.32■□□□□ 0.68
SCARNA2-201ENST00000458748 TBX10O75333 385 aa19.32■□□□□ 0.68
SCARNA2-201ENST00000458748 ALDH2P05091 517 aa19.32■□□□□ 0.68
SCARNA2-201ENST00000458748 GUCY2CP25092 1073 aa19.32■□□□□ 0.68
SCARNA2-201ENST00000458748 SMAD4Q13485 552 aaKnown RBP19.32■□□□□ 0.68
SCARNA2-201ENST00000458748 GIT2Q14161 759 aa19.32■□□□□ 0.68
SCARNA2-201ENST00000458748 SMC1AQ14683 1233 aaKnown RBP19.32■□□□□ 0.68
SCARNA2-201ENST00000458748 RINT1Q6NUQ1 792 aa19.32■□□□□ 0.68
SCARNA2-201ENST00000458748 TMC7Q7Z402 723 aa19.32■□□□□ 0.68
SCARNA2-201ENST00000458748 RBM23Q86U06 439 aaKnown RBP19.32■□□□□ 0.68
SCARNA2-201ENST00000458748 SYT2Q8N9I0 419 aaPredicted RBP19.32■□□□□ 0.68
SCARNA2-201ENST00000458748 SMG8Q8ND04 991 aaKnown RBP19.32■□□□□ 0.68
SCARNA2-201ENST00000458748 MSLNLQ96KJ4 702 aa19.32■□□□□ 0.68
SCARNA2-201ENST00000458748 GBP3Q9H0R5 595 aa19.32■□□□□ 0.68
SCARNA2-201ENST00000458748 PCDHGC5Q9Y5F6 944 aa19.32■□□□□ 0.68
SCARNA2-201ENST00000458748 ARL5CA6NH57 179 aa19.31■□□□□ 0.68
SCARNA2-201ENST00000458748 HIP1RO75146 1068 aa19.31■□□□□ 0.68
SCARNA2-201ENST00000458748 NPTXRO95502 500 aa19.31■□□□□ 0.68
SCARNA2-201ENST00000458748 GALTP07902 379 aa19.31■□□□□ 0.68
SCARNA2-201ENST00000458748 LIG1P18858 919 aa19.31■□□□□ 0.68
SCARNA2-201ENST00000458748 TXLNAP40222 546 aa19.31■□□□□ 0.68
SCARNA2-201ENST00000458748 SMTNP53814 917 aa19.31■□□□□ 0.68
SCARNA2-201ENST00000458748 COASYQ13057 564 aa19.31■□□□□ 0.68
SCARNA2-201ENST00000458748 SMAD2Q15796 467 aaKnown RBP19.31■□□□□ 0.68
SCARNA2-201ENST00000458748 CLUL1Q15846 466 aa19.31■□□□□ 0.68
SCARNA2-201ENST00000458748 DCAF4L1Q3SXM0 396 aa19.31■□□□□ 0.68
SCARNA2-201ENST00000458748 TMEM31Q5JXX7 168 aa19.31■□□□□ 0.68
SCARNA2-201ENST00000458748 PLPP4Q5VZY2 271 aa19.31■□□□□ 0.68
SCARNA2-201ENST00000458748 BSNDQ8WZ55 320 aa19.31■□□□□ 0.68
SCARNA2-201ENST00000458748 C11orf16Q9NQ32 467 aa19.31■□□□□ 0.68
SCARNA2-201ENST00000458748 FOXD4L1Q9NU39 408 aa19.31■□□□□ 0.68
SCARNA2-201ENST00000458748 CLEC1BQ9P126 229 aa19.31■□□□□ 0.68
SCARNA2-201ENST00000458748 MBTPS2O43462 519 aa19.3■□□□□ 0.68
SCARNA2-201ENST00000458748 PLA2G4BP0C869 781 aa19.3■□□□□ 0.68
SCARNA2-201ENST00000458748 PEX3P56589 373 aa19.3■□□□□ 0.68
SCARNA2-201ENST00000458748 RESTQ13127 1097 aa19.3■□□□□ 0.68
SCARNA2-201ENST00000458748 TMEM184AQ6ZMB5 413 aa19.3■□□□□ 0.68
SCARNA2-201ENST00000458748 C1orf186Q6ZWK4 172 aa19.3■□□□□ 0.68
SCARNA2-201ENST00000458748 DDX53Q86TM3 631 aaKnown RBP19.3■□□□□ 0.68
SCARNA2-201ENST00000458748 MRPL43Q8N983 215 aaKnown RBP19.3■□□□□ 0.68
SCARNA2-201ENST00000458748 IGSF21Q96ID5 467 aa19.3■□□□□ 0.68
SCARNA2-201ENST00000458748 PNMA5Q96PV4 448 aa19.3■□□□□ 0.68
SCARNA2-201ENST00000458748 RPS6KC1Q96S38 1066 aa19.3■□□□□ 0.68
SCARNA2-201ENST00000458748 RUSC1Q9BVN2 902 aa19.3■□□□□ 0.68
SCARNA2-201ENST00000458748 APOL6Q9BWW8 343 aa19.3■□□□□ 0.68
SCARNA2-201ENST00000458748 CCDC113Q9H0I3 377 aa19.3■□□□□ 0.68
SCARNA2-201ENST00000458748 KMT5AQ9NQR1 393 aa19.3■□□□□ 0.68
SCARNA2-201ENST00000458748 CCDC39Q9UFE4 941 aa19.3■□□□□ 0.68
SCARNA2-201ENST00000458748 PARP2Q9UGN5 583 aa19.3■□□□□ 0.68
SCARNA2-201ENST00000458748 FAN1Q9Y2M0 1017 aa19.3■□□□□ 0.68
SCARNA2-201ENST00000458748 TDRD15B5MCY1 1934 aaKnown RBP19.29■□□□□ 0.68
SCARNA2-201ENST00000458748 NT5C1B-RDH14C9J2C7 533 aa19.29■□□□□ 0.68
SCARNA2-201ENST00000458748 PI4K2BG5E9Z4 385 aa19.29■□□□□ 0.68
SCARNA2-201ENST00000458748 H0YCG3 227 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms