RNA–Protein interactions for RNA: ENST00000457302.2

C9orf139-201, Transcript of chromosome 9 open reading frame 139, humanhuman

TSL 3

Gene C9orf139, Length 697 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139-201ENST00000457302 TRAK2O60296 914 aa13.53□□□□□ -0.24
C9orf139-201ENST00000457302 NR1I2O75469 434 aa13.53□□□□□ -0.24
C9orf139-201ENST00000457302 ARHGEF15O94989 841 aa13.53□□□□□ -0.24
C9orf139-201ENST00000457302 MATR3P43243 847 aaKnown RBP eCLIP13.53□□□□□ -0.24
C9orf139-201ENST00000457302 GATMP50440 423 aa13.53□□□□□ -0.24
C9orf139-201ENST00000457302 CACNB1Q02641 598 aaPredicted RBP13.53□□□□□ -0.24
C9orf139-201ENST00000457302 KRT17Q04695 432 aa13.53□□□□□ -0.24
C9orf139-201ENST00000457302 BMS1Q14692 1282 aaKnown RBP13.53□□□□□ -0.24
C9orf139-201ENST00000457302 AMHR2Q16671 573 aa13.53□□□□□ -0.24
C9orf139-201ENST00000457302 DCAF4L1Q3SXM0 396 aa13.53□□□□□ -0.24
C9orf139-201ENST00000457302 NOMO2Q5JPE7 1267 aa13.53□□□□□ -0.24
C9orf139-201ENST00000457302 ATF7IP2Q5U623 682 aa13.53□□□□□ -0.24
C9orf139-201ENST00000457302 DYMQ7RTS9 669 aa13.53□□□□□ -0.24
C9orf139-201ENST00000457302 FAM178BQ8IXR5 827 aa13.53□□□□□ -0.24
C9orf139-201ENST00000457302 THNSL1Q8IYQ7 743 aa13.53□□□□□ -0.24
C9orf139-201ENST00000457302 MICALL1Q8N3F8 863 aa13.53□□□□□ -0.24
C9orf139-201ENST00000457302 MAFAQ8NHW3 353 aaPredicted RBP13.53□□□□□ -0.24
C9orf139-201ENST00000457302 P2RX5Q93086 422 aa13.53□□□□□ -0.24
C9orf139-201ENST00000457302 DHX58Q96C10 678 aa13.53□□□□□ -0.24
C9orf139-201ENST00000457302 KIFC3Q9BVG8 833 aa13.53□□□□□ -0.24
C9orf139-201ENST00000457302 APOL6Q9BWW8 343 aa13.53□□□□□ -0.24
C9orf139-201ENST00000457302 RC3H2Q9HBD1 1191 aaKnown RBP13.53□□□□□ -0.24
C9orf139-201ENST00000457302 GIT1Q9Y2X7 761 aa13.53□□□□□ -0.24
C9orf139-201ENST00000457302 IPPQ9Y573 584 aa13.53□□□□□ -0.24
C9orf139-201ENST00000457302 C5orf67F2Z3F1 127 aa13.52□□□□□ -0.25
C9orf139-201ENST00000457302 POLR2DO15514 142 aaKnown RBP13.52□□□□□ -0.25
C9orf139-201ENST00000457302 B4GALT5O43286 388 aa13.52□□□□□ -0.25
C9orf139-201ENST00000457302 OFD1O75665 1012 aa13.52□□□□□ -0.25
C9orf139-201ENST00000457302 ALDH2P05091 517 aa13.52□□□□□ -0.25
C9orf139-201ENST00000457302 IDEP14735 1019 aa13.52□□□□□ -0.25
C9orf139-201ENST00000457302 GAP43P17677 238 aa13.52□□□□□ -0.25
C9orf139-201ENST00000457302 POU3F3P20264 500 aaPredicted RBP13.52□□□□□ -0.25
C9orf139-201ENST00000457302 CCDC85BQ15834 202 aaPredicted RBP13.52□□□□□ -0.25
C9orf139-201ENST00000457302 UBXN11Q5T124 520 aa13.52□□□□□ -0.25
C9orf139-201ENST00000457302 ADALQ6DHV7 355 aa13.52□□□□□ -0.25
C9orf139-201ENST00000457302 HAUS6Q7Z4H7 955 aa13.52□□□□□ -0.25
C9orf139-201ENST00000457302 CDR2LQ86X02 465 aaPredicted RBP13.52□□□□□ -0.25
C9orf139-201ENST00000457302 CCDC65Q8IXS2 484 aa13.52□□□□□ -0.25
C9orf139-201ENST00000457302 CEP57L1Q8IYX8 460 aa13.52□□□□□ -0.25
C9orf139-201ENST00000457302 DAW1Q8N136 415 aa13.52□□□□□ -0.25
C9orf139-201ENST00000457302 MICAL1Q8TDZ2 1067 aa13.52□□□□□ -0.25
C9orf139-201ENST00000457302 GDPD5Q8WTR4 605 aa13.52□□□□□ -0.25
C9orf139-201ENST00000457302 LEO1Q8WVC0 666 aaPredicted RBP13.52□□□□□ -0.25
C9orf139-201ENST00000457302 DDX12PQ92771 950 aa13.52□□□□□ -0.25
C9orf139-201ENST00000457302 PPP2R3CQ969Q6 453 aa13.52□□□□□ -0.25
C9orf139-201ENST00000457302 BICD1Q96G01 975 aa13.52□□□□□ -0.25
C9orf139-201ENST00000457302 CCDC34Q96HJ3 373 aa13.52□□□□□ -0.25
C9orf139-201ENST00000457302 ZNF558Q96NG5 402 aa13.52□□□□□ -0.25
C9orf139-201ENST00000457302 EIF2AQ9BY44 585 aaKnown RBP13.52□□□□□ -0.25
C9orf139-201ENST00000457302 LMAN2LQ9H0V9 348 aa13.52□□□□□ -0.25
C9orf139-201ENST00000457302 PRRC2BQ5JSZ5 2229 aaKnown RBP13.51□□□□□ -0.25
C9orf139-201ENST00000457302 K7ENM7 598 aa13.51□□□□□ -0.25
C9orf139-201ENST00000457302 PPM1AP35813 382 aa13.51□□□□□ -0.25
C9orf139-201ENST00000457302 YARSP54577 528 aaKnown RBP13.51□□□□□ -0.25
C9orf139-201ENST00000457302 MAPK7Q13164 816 aa13.51□□□□□ -0.25
C9orf139-201ENST00000457302 ADGRE1Q14246 886 aa13.51□□□□□ -0.25
C9orf139-201ENST00000457302 SKIV2LQ15477 1246 aaKnown RBP13.51□□□□□ -0.25
C9orf139-201ENST00000457302 TPRNQ4KMQ1 711 aa13.51□□□□□ -0.25
C9orf139-201ENST00000457302 HERC4Q5GLZ8 1057 aaPredicted RBP13.51□□□□□ -0.25
C9orf139-201ENST00000457302 CLLU1OSQ5K130 101 aa13.51□□□□□ -0.25
C9orf139-201ENST00000457302 AXDND1Q5T1B0 1012 aaPredicted RBP13.51□□□□□ -0.25
C9orf139-201ENST00000457302 RESP18Q5W5W9 173 aa13.51□□□□□ -0.25
C9orf139-201ENST00000457302 SHC4Q6S5L8 630 aa13.51□□□□□ -0.25
C9orf139-201ENST00000457302 KCNT2Q6UVM3 1135 aa13.51□□□□□ -0.25
C9orf139-201ENST00000457302 RPS6KC1Q96S38 1066 aa13.51□□□□□ -0.25
C9orf139-201ENST00000457302 ACO2Q99798 780 aaKnown RBP13.51□□□□□ -0.25
C9orf139-201ENST00000457302 CCDC113Q9H0I3 377 aa13.51□□□□□ -0.25
C9orf139-201ENST00000457302 GBP3Q9H0R5 595 aa13.51□□□□□ -0.25
C9orf139-201ENST00000457302 TNMDQ9H2S6 317 aa13.51□□□□□ -0.25
C9orf139-201ENST00000457302 MAGEF1Q9HAY2 307 aa13.51□□□□□ -0.25
C9orf139-201ENST00000457302 ARHGAP28Q9P2N2 729 aa13.51□□□□□ -0.25
C9orf139-201ENST00000457302 SEL1LQ9UBV2 794 aa13.51□□□□□ -0.25
C9orf139-201ENST00000457302 KCNH3Q9ULD8 1083 aa13.51□□□□□ -0.25
C9orf139-201ENST00000457302 TNFSF13BQ9Y275 285 aa13.51□□□□□ -0.25
C9orf139-201ENST00000457302 MTCH2Q9Y6C9 303 aa13.51□□□□□ -0.25
C9orf139-201ENST00000457302 EPOPA6NHQ4 379 aa13.5□□□□□ -0.25
C9orf139-201ENST00000457302 MYMKA6NI61 221 aa13.5□□□□□ -0.25
C9orf139-201ENST00000457302 CLDN3O15551 220 aa13.5□□□□□ -0.25
C9orf139-201ENST00000457302 LPXNO60711 386 aa13.5□□□□□ -0.25
C9orf139-201ENST00000457302 MAPTP10636 758 aaKnown RBP13.5□□□□□ -0.25
C9orf139-201ENST00000457302 ATF7P17544 494 aaPredicted RBP13.5□□□□□ -0.25
C9orf139-201ENST00000457302 CMA1P23946 247 aa13.5□□□□□ -0.25
C9orf139-201ENST00000457302 AKAP5P24588 427 aa13.5□□□□□ -0.25
C9orf139-201ENST00000457302 NCKAP1LP55160 1127 aa13.5□□□□□ -0.25
C9orf139-201ENST00000457302 UBE3AQ05086 875 aa13.5□□□□□ -0.25
C9orf139-201ENST00000457302 NT5DC1Q5TFE4 455 aa13.5□□□□□ -0.25
C9orf139-201ENST00000457302 AGMOQ6ZNB7 445 aa13.5□□□□□ -0.25
C9orf139-201ENST00000457302 STXBP4Q6ZWJ1 553 aa13.5□□□□□ -0.25
C9orf139-201ENST00000457302 SPRED2Q7Z698 418 aa13.5□□□□□ -0.25
C9orf139-201ENST00000457302 KLHL23Q8NBE8 558 aa13.5□□□□□ -0.25
C9orf139-201ENST00000457302 COLGALT1Q8NBJ5 622 aa13.5□□□□□ -0.25
C9orf139-201ENST00000457302 SMG8Q8ND04 991 aaKnown RBP13.5□□□□□ -0.25
C9orf139-201ENST00000457302 TMEM161BQ8NDZ6 487 aa13.5□□□□□ -0.25
C9orf139-201ENST00000457302 MRPL38Q96DV4 380 aaKnown RBP13.5□□□□□ -0.25
C9orf139-201ENST00000457302 CCDC94Q9BW85 323 aaPredicted RBP13.5□□□□□ -0.25
C9orf139-201ENST00000457302 TARS2Q9BW92 718 aaKnown RBP13.5□□□□□ -0.25
C9orf139-201ENST00000457302 PDZD7Q9H5P4 517 aa13.5□□□□□ -0.25
C9orf139-201ENST00000457302 CWH43Q9H720 699 aa13.5□□□□□ -0.25
C9orf139-201ENST00000457302 MRPL44Q9H9J2 332 aaKnown RBP13.5□□□□□ -0.25
C9orf139-201ENST00000457302 ALG13Q9NP73 1137 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms