RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 CALCOCO2Q13137 446 aa11.06□□□□□ -0.64
CLIP4-208ENST00000456385 TRIP13Q15645 432 aaPredicted RBP11.06□□□□□ -0.64
CLIP4-208ENST00000456385 NBPF20Q3BBV1 942 aa11.06□□□□□ -0.64
CLIP4-208ENST00000456385 PPP1R15BQ5SWA1 713 aa11.06□□□□□ -0.64
CLIP4-208ENST00000456385 BICDL1Q6ZP65 573 aa11.06□□□□□ -0.64
CLIP4-208ENST00000456385 PRUNE1Q86TP1 453 aa11.06□□□□□ -0.64
CLIP4-208ENST00000456385 CATSPER3Q86XQ3 398 aa11.06□□□□□ -0.64
CLIP4-208ENST00000456385 LMNTD2Q8IXW0 634 aa11.06□□□□□ -0.64
CLIP4-208ENST00000456385 UBL4BQ8N7F7 174 aa11.06□□□□□ -0.64
CLIP4-208ENST00000456385 PHC3Q8NDX5 983 aa11.06□□□□□ -0.64
CLIP4-208ENST00000456385 BTBD6Q96KE9 485 aa11.06□□□□□ -0.64
CLIP4-208ENST00000456385 MAGEB18Q96M61 343 aa11.06□□□□□ -0.64
CLIP4-208ENST00000456385 TBC1D10AQ9BXI6 508 aa11.06□□□□□ -0.64
CLIP4-208ENST00000456385 TAOK3Q9H2K8 898 aa11.06□□□□□ -0.64
CLIP4-208ENST00000456385 TXLNGQ9NUQ3 528 aa11.06□□□□□ -0.64
CLIP4-208ENST00000456385 ANKIB1Q9P2G1 1089 aa11.06□□□□□ -0.64
CLIP4-208ENST00000456385 ITGB4P16144 1822 aa11.06□□□□□ -0.64
CLIP4-208ENST00000456385 PITPNM2Q9BZ72 1349 aa11.06□□□□□ -0.64
CLIP4-208ENST00000456385 GPR75-ASB3A0A0A6YYF3 556 aa11.06□□□□□ -0.64
CLIP4-208ENST00000456385 A0A1B0GVG6 124 aa11.06□□□□□ -0.64
CLIP4-208ENST00000456385 UBAP1LF5GYI3 381 aa11.06□□□□□ -0.64
CLIP4-208ENST00000456385 CBX6O95503 412 aa11.06□□□□□ -0.64
CLIP4-208ENST00000456385 FTLP02792 175 aaPredicted RBP11.06□□□□□ -0.64
CLIP4-208ENST00000456385 T-ENOLP0DO92 83 aa11.06□□□□□ -0.64
CLIP4-208ENST00000456385 SESN3P58005 492 aa11.06□□□□□ -0.64
CLIP4-208ENST00000456385 MRPS35P82673 323 aaKnown RBP11.06□□□□□ -0.64
CLIP4-208ENST00000456385 DNAJC3Q13217 504 aa11.06□□□□□ -0.64
CLIP4-208ENST00000456385 PARP6Q2NL67 630 aa11.06□□□□□ -0.64
CLIP4-208ENST00000456385 TMEM63BQ5T3F8 832 aa11.06□□□□□ -0.64
CLIP4-208ENST00000456385 ZNF746Q6NUN9 644 aaPredicted RBP11.06□□□□□ -0.64
CLIP4-208ENST00000456385 INTS8Q75QN2 995 aaKnown RBP11.06□□□□□ -0.64
CLIP4-208ENST00000456385 TRMT10CQ7L0Y3 403 aaKnown RBP11.06□□□□□ -0.64
CLIP4-208ENST00000456385 MIGA2Q7L4E1 593 aa11.06□□□□□ -0.64
CLIP4-208ENST00000456385 CCDC24Q8N4L8 307 aa11.06□□□□□ -0.64
CLIP4-208ENST00000456385 NEDD1Q8NHV4 660 aa11.06□□□□□ -0.64
CLIP4-208ENST00000456385 ASAP3Q8TDY4 903 aa11.06□□□□□ -0.64
CLIP4-208ENST00000456385 C1orf54Q8WWF1 131 aa11.06□□□□□ -0.64
CLIP4-208ENST00000456385 SLC7A6OSQ96CW6 309 aaPredicted RBP11.06□□□□□ -0.64
CLIP4-208ENST00000456385 BORCS6Q96GS4 357 aa11.06□□□□□ -0.64
CLIP4-208ENST00000456385 DENND2DQ9H6A0 471 aaPredicted RBP11.06□□□□□ -0.64
CLIP4-208ENST00000456385 SLCO1B3Q9NPD5 702 aa11.06□□□□□ -0.64
CLIP4-208ENST00000456385 DLGAP2Q9P1A6 1054 aa11.06□□□□□ -0.64
CLIP4-208ENST00000456385 ASB3Q9Y575 518 aa11.06□□□□□ -0.64
CLIP4-208ENST00000456385 USP17L15C9J2P7 530 aa11.05□□□□□ -0.64
CLIP4-208ENST00000456385 USP17L13C9JLJ4 530 aa11.05□□□□□ -0.64
CLIP4-208ENST00000456385 USP17L11C9JVI0 530 aa11.05□□□□□ -0.64
CLIP4-208ENST00000456385 USP17L18D6R9N7 530 aa11.05□□□□□ -0.64
CLIP4-208ENST00000456385 USP17L22D6RA61 530 aa11.05□□□□□ -0.64
CLIP4-208ENST00000456385 USP17L17D6RBQ6 530 aa11.05□□□□□ -0.64
CLIP4-208ENST00000456385 USP17L19D6RCP7 530 aa11.05□□□□□ -0.64
CLIP4-208ENST00000456385 USP17L20D6RJB6 530 aa11.05□□□□□ -0.64
CLIP4-208ENST00000456385 FOXN3O00409 490 aaPredicted RBP11.05□□□□□ -0.64
CLIP4-208ENST00000456385 TGFB1I1O43294 461 aa11.05□□□□□ -0.64
CLIP4-208ENST00000456385 RTN3O95197 1032 aaPredicted RBP11.05□□□□□ -0.64
CLIP4-208ENST00000456385 TTLL1O95922 423 aa11.05□□□□□ -0.64
CLIP4-208ENST00000456385 LDHBP07195 334 aaKnown RBP11.05□□□□□ -0.64
CLIP4-208ENST00000456385 TRIM49P0CI25 452 aa11.05□□□□□ -0.64
CLIP4-208ENST00000456385 TRIM49CP0CI26 452 aa11.05□□□□□ -0.64
CLIP4-208ENST00000456385 DLATP10515 647 aaKnown RBP11.05□□□□□ -0.64
CLIP4-208ENST00000456385 CLK2P49760 499 aaKnown RBP11.05□□□□□ -0.64
CLIP4-208ENST00000456385 ROR2Q01974 943 aaKnown RBP11.05□□□□□ -0.64
CLIP4-208ENST00000456385 CCDC15Q0P6D6 951 aa11.05□□□□□ -0.64
CLIP4-208ENST00000456385 USP17L24Q0WX57 530 aa11.05□□□□□ -0.64
CLIP4-208ENST00000456385 ACVR2BQ13705 512 aa11.05□□□□□ -0.64
CLIP4-208ENST00000456385 COG2Q14746 738 aa11.05□□□□□ -0.64
CLIP4-208ENST00000456385 SIX1Q15475 284 aaPredicted RBP11.05□□□□□ -0.64
CLIP4-208ENST00000456385 RBM26Q5T8P6 1007 aaKnown RBP11.05□□□□□ -0.64
CLIP4-208ENST00000456385 ARMC3Q5W041 872 aa11.05□□□□□ -0.64
CLIP4-208ENST00000456385 USP17L6PQ6QN14 398 aa11.05□□□□□ -0.64
CLIP4-208ENST00000456385 ANKRD27Q96NW4 1050 aa11.05□□□□□ -0.64
CLIP4-208ENST00000456385 LRRC37BQ96QE4 947 aa11.05□□□□□ -0.64
CLIP4-208ENST00000456385 RUSC1Q9BVN2 902 aa11.05□□□□□ -0.64
CLIP4-208ENST00000456385 DNAJC18Q9H819 358 aa11.05□□□□□ -0.64
CLIP4-208ENST00000456385 METTL14Q9HCE5 456 aaKnown RBP11.05□□□□□ -0.64
CLIP4-208ENST00000456385 TYW1Q9NV66 732 aaKnown RBP11.05□□□□□ -0.64
CLIP4-208ENST00000456385 NAALADL1Q9UQQ1 740 aa11.05□□□□□ -0.64
CLIP4-208ENST00000456385 PASKQ96RG2 1323 aa11.05□□□□□ -0.64
CLIP4-208ENST00000456385 KIF13BQ9NQT8 1826 aa11.05□□□□□ -0.64
CLIP4-208ENST00000456385 NPTXRO95502 500 aa11.04□□□□□ -0.64
CLIP4-208ENST00000456385 ECEL1O95672 775 aa11.04□□□□□ -0.64
CLIP4-208ENST00000456385 TTC4O95801 387 aa11.04□□□□□ -0.64
CLIP4-208ENST00000456385 SP100P23497 879 aaPredicted RBP11.04□□□□□ -0.64
CLIP4-208ENST00000456385 SMARCA1P28370 1054 aa11.04□□□□□ -0.64
CLIP4-208ENST00000456385 SLC16A2P36021 539 aa11.04□□□□□ -0.64
CLIP4-208ENST00000456385 FMO5P49326 533 aa11.04□□□□□ -0.64
CLIP4-208ENST00000456385 POLGP54098 1239 aaPredicted RBP11.04□□□□□ -0.64
CLIP4-208ENST00000456385 WDR4P57081 412 aaKnown RBP11.04□□□□□ -0.64
CLIP4-208ENST00000456385 KRT17Q04695 432 aa11.04□□□□□ -0.64
CLIP4-208ENST00000456385 KLC1Q07866 573 aa11.04□□□□□ -0.64
CLIP4-208ENST00000456385 SETDB1Q15047 1291 aa11.04□□□□□ -0.64
CLIP4-208ENST00000456385 SF3B3Q15393 1217 aaKnown RBP11.04□□□□□ -0.64
CLIP4-208ENST00000456385 SEL1L2Q5TEA6 688 aa11.04□□□□□ -0.64
CLIP4-208ENST00000456385 TTBK2Q6IQ55 1244 aa11.04□□□□□ -0.64
CLIP4-208ENST00000456385 ARHGEF18Q6ZSZ5 1173 aa11.04□□□□□ -0.64
CLIP4-208ENST00000456385 CYFIP1Q7L576 1253 aa11.04□□□□□ -0.64
CLIP4-208ENST00000456385 SLC13A5Q86YT5 568 aaPredicted RBP11.04□□□□□ -0.64
CLIP4-208ENST00000456385 MFN1Q8IWA4 741 aa11.04□□□□□ -0.64
CLIP4-208ENST00000456385 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.04□□□□□ -0.64
CLIP4-208ENST00000456385 GALNT15Q8N3T1 639 aa11.04□□□□□ -0.64
CLIP4-208ENST00000456385 DNAJC9Q8WXX5 260 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms