RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 KCNA1Q09470 495 aa12.7□□□□□ -0.38
SCN9A-204ENST00000452182 KNOP1Q1ED39 458 aaKnown RBP12.7□□□□□ -0.38
SCN9A-204ENST00000452182 NOTUMQ6P988 496 aa12.7□□□□□ -0.38
SCN9A-204ENST00000452182 CNKSR3Q6P9H4 555 aa12.7□□□□□ -0.38
SCN9A-204ENST00000452182 MLKLQ8NB16 471 aa12.7□□□□□ -0.38
SCN9A-204ENST00000452182 DBF4BQ8NFT6 615 aa12.7□□□□□ -0.38
SCN9A-204ENST00000452182 ACO2Q99798 780 aaKnown RBP12.7□□□□□ -0.38
SCN9A-204ENST00000452182 TMX1Q9H3N1 280 aa12.7□□□□□ -0.38
SCN9A-204ENST00000452182 PTPRHQ9HD43 1115 aa12.7□□□□□ -0.38
SCN9A-204ENST00000452182 IL23AQ9NPF7 189 aa12.7□□□□□ -0.38
SCN9A-204ENST00000452182 ZMYND8Q9ULU4 1186 aaPredicted RBP12.7□□□□□ -0.38
SCN9A-204ENST00000452182 TNFSF13BQ9Y275 285 aa12.7□□□□□ -0.38
SCN9A-204ENST00000452182 TET1Q8NFU7 2136 aa12.7□□□□□ -0.38
SCN9A-204ENST00000452182 ZMYM2Q9UBW7 1377 aa12.7□□□□□ -0.38
SCN9A-204ENST00000452182 BIN1O00499 593 aa12.7□□□□□ -0.38
SCN9A-204ENST00000452182 B4GALT5O43286 388 aa12.7□□□□□ -0.38
SCN9A-204ENST00000452182 TOM1L1O75674 476 aa12.7□□□□□ -0.38
SCN9A-204ENST00000452182 PROZP22891 400 aa12.7□□□□□ -0.38
SCN9A-204ENST00000452182 PRCPP42785 496 aa12.7□□□□□ -0.38
SCN9A-204ENST00000452182 NLRP12P59046 1061 aa12.7□□□□□ -0.38
SCN9A-204ENST00000452182 DSC3Q14574 896 aa12.7□□□□□ -0.38
SCN9A-204ENST00000452182 ATF7IP2Q5U623 682 aa12.7□□□□□ -0.38
SCN9A-204ENST00000452182 DEFB128Q7Z7B8 93 aa12.7□□□□□ -0.38
SCN9A-204ENST00000452182 ADSSL1Q8N142 457 aa12.7□□□□□ -0.38
SCN9A-204ENST00000452182 FBXO22Q8NEZ5 403 aa12.7□□□□□ -0.38
SCN9A-204ENST00000452182 TMEM174Q8WUU8 243 aa12.7□□□□□ -0.38
SCN9A-204ENST00000452182 LBHD1Q9BQE6 289 aaPredicted RBP12.7□□□□□ -0.38
SCN9A-204ENST00000452182 TARS2Q9BW92 718 aaKnown RBP12.7□□□□□ -0.38
SCN9A-204ENST00000452182 GBP3Q9H0R5 595 aa12.7□□□□□ -0.38
SCN9A-204ENST00000452182 CGNQ9P2M7 1197 aaKnown RBP12.7□□□□□ -0.38
SCN9A-204ENST00000452182 PIN4Q9Y237 131 aaKnown RBP12.7□□□□□ -0.38
SCN9A-204ENST00000452182 STYXL1Q9Y6J8 313 aa12.7□□□□□ -0.38
SCN9A-204ENST00000452182 C19orf67A6NJJ6 358 aa12.69□□□□□ -0.38
SCN9A-204ENST00000452182 TTLL13PA6NNM8 815 aa12.69□□□□□ -0.38
SCN9A-204ENST00000452182 HNRNPDLO14979 420 aaKnown RBP12.69□□□□□ -0.38
SCN9A-204ENST00000452182 N4BP3O15049 544 aa12.69□□□□□ -0.38
SCN9A-204ENST00000452182 EFCAB14O75071 495 aa12.69□□□□□ -0.38
SCN9A-204ENST00000452182 ZSCAN20P17040 1043 aaPredicted RBP12.69□□□□□ -0.38
SCN9A-204ENST00000452182 LIG4P49917 911 aa12.69□□□□□ -0.38
SCN9A-204ENST00000452182 STIM1Q13586 685 aa12.69□□□□□ -0.38
SCN9A-204ENST00000452182 CT47A1Q5JQC4 288 aaPredicted RBP12.69□□□□□ -0.38
SCN9A-204ENST00000452182 ISM2Q6H9L7 571 aa12.69□□□□□ -0.38
SCN9A-204ENST00000452182 SLFN12LQ6IEE8 588 aa12.69□□□□□ -0.38
SCN9A-204ENST00000452182 FOXR2Q6PJQ5 311 aa12.69□□□□□ -0.38
SCN9A-204ENST00000452182 SASS6Q6UVJ0 657 aa12.69□□□□□ -0.38
SCN9A-204ENST00000452182 SMYD4Q8IYR2 804 aaPredicted RBP12.69□□□□□ -0.38
SCN9A-204ENST00000452182 SYCP3Q8IZU3 236 aa12.69□□□□□ -0.38
SCN9A-204ENST00000452182 GOLGA5Q8TBA6 731 aa12.69□□□□□ -0.38
SCN9A-204ENST00000452182 DHTKD1Q96HY7 919 aaPredicted RBP12.69□□□□□ -0.38
SCN9A-204ENST00000452182 KCTD10Q9H3F6 313 aa12.69□□□□□ -0.38
SCN9A-204ENST00000452182 MICAL3Q7RTP6 2002 aa12.68□□□□□ -0.38
SCN9A-204ENST00000452182 ABHD14A-ACY1A0A1B0GW23 586 aa12.68□□□□□ -0.38
SCN9A-204ENST00000452182 PPP1R3GB7ZBB8 358 aa12.68□□□□□ -0.38
SCN9A-204ENST00000452182 PDXKO00764 312 aa12.68□□□□□ -0.38
SCN9A-204ENST00000452182 ABLIM1O14639 778 aa12.68□□□□□ -0.38
SCN9A-204ENST00000452182 TGFB1I1O43294 461 aa12.68□□□□□ -0.38
SCN9A-204ENST00000452182 BAIAP3O94812 1187 aa12.68□□□□□ -0.38
SCN9A-204ENST00000452182 IKBKEQ14164 716 aa12.68□□□□□ -0.38
SCN9A-204ENST00000452182 ZSCAN23Q3MJ62 389 aa12.68□□□□□ -0.38
SCN9A-204ENST00000452182 SLC27A1Q6PCB7 646 aa12.68□□□□□ -0.38
SCN9A-204ENST00000452182 C16orf59Q7L2K0 433 aa12.68□□□□□ -0.38
SCN9A-204ENST00000452182 HS2ST1Q7LGA3 356 aa12.68□□□□□ -0.38
SCN9A-204ENST00000452182 APBB1IPQ7Z5R6 666 aaPredicted RBP12.68□□□□□ -0.38
SCN9A-204ENST00000452182 NELFCDQ8IXH7 590 aa12.68□□□□□ -0.38
SCN9A-204ENST00000452182 C12orf56Q8IXR9 622 aa12.68□□□□□ -0.38
SCN9A-204ENST00000452182 BICD1Q96G01 975 aa12.68□□□□□ -0.38
SCN9A-204ENST00000452182 CPB2Q96IY4 423 aa12.68□□□□□ -0.38
SCN9A-204ENST00000452182 PDZD7Q9H5P4 517 aa12.68□□□□□ -0.38
SCN9A-204ENST00000452182 RGS18Q9NS28 235 aa12.68□□□□□ -0.38
SCN9A-204ENST00000452182 C1orf112Q9NSG2 853 aa12.68□□□□□ -0.38
SCN9A-204ENST00000452182 TYW1Q9NV66 732 aaKnown RBP12.68□□□□□ -0.38
SCN9A-204ENST00000452182 MAPK8IP1Q9UQF2 711 aa12.68□□□□□ -0.38
SCN9A-204ENST00000452182 TRAF3IP3Q9Y228 551 aa12.68□□□□□ -0.38
SCN9A-204ENST00000452182 PSMA7O14818 248 aa12.67□□□□□ -0.38
SCN9A-204ENST00000452182 CLDN3O15551 220 aa12.67□□□□□ -0.38
SCN9A-204ENST00000452182 MGEA5O60502 916 aa12.67□□□□□ -0.38
SCN9A-204ENST00000452182 ZNF623O75123 536 aa12.67□□□□□ -0.38
SCN9A-204ENST00000452182 ACTN1P12814 892 aa12.67□□□□□ -0.38
SCN9A-204ENST00000452182 GARTP22102 1010 aa12.67□□□□□ -0.38
SCN9A-204ENST00000452182 RAB27AP51159 221 aa12.67□□□□□ -0.38
SCN9A-204ENST00000452182 MCL1Q07820 350 aa12.67□□□□□ -0.38
SCN9A-204ENST00000452182 NFIL3Q16649 462 aa12.67□□□□□ -0.38
SCN9A-204ENST00000452182 DPCR1Q3MIW9 517 aa12.67□□□□□ -0.38
SCN9A-204ENST00000452182 DCAF4L1Q3SXM0 396 aa12.67□□□□□ -0.38
SCN9A-204ENST00000452182 ZCWPW2Q504Y3 356 aa12.67□□□□□ -0.38
SCN9A-204ENST00000452182 UBXN11Q5T124 520 aa12.67□□□□□ -0.38
SCN9A-204ENST00000452182 TWF2Q6IBS0 349 aaKnown RBP12.67□□□□□ -0.38
SCN9A-204ENST00000452182 CENPPQ6IPU0 288 aa12.67□□□□□ -0.38
SCN9A-204ENST00000452182 SLC39A4Q6P5W5 647 aa12.67□□□□□ -0.38
SCN9A-204ENST00000452182 PSRC1Q6PGN9 363 aaPredicted RBP12.67□□□□□ -0.38
SCN9A-204ENST00000452182 MPZL3Q6UWV2 235 aa12.67□□□□□ -0.38
SCN9A-204ENST00000452182 SLC24A5Q71RS6 500 aa12.67□□□□□ -0.38
SCN9A-204ENST00000452182 RTN4RL1Q86UN2 441 aaPredicted RBP12.67□□□□□ -0.38
SCN9A-204ENST00000452182 ADAM2Q99965 735 aa12.67□□□□□ -0.38
SCN9A-204ENST00000452182 ADPGKQ9BRR6 497 aa12.67□□□□□ -0.38
SCN9A-204ENST00000452182 ANO10Q9NW15 660 aa12.67□□□□□ -0.38
SCN9A-204ENST00000452182 WDR70Q9NW82 654 aa12.67□□□□□ -0.38
SCN9A-204ENST00000452182 DACH1Q9UI36 760 aa12.67□□□□□ -0.38
SCN9A-204ENST00000452182 USP20Q9Y2K6 914 aa12.67□□□□□ -0.38
SCN9A-204ENST00000452182 A0A0B4J269 797 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms