RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 FOXP4Q8IVH2 680 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P22-202ENST00000451823 LINS1Q8NG48 757 aa4.66□□□□□ -1.66
HMGB3P22-202ENST00000451823 MED15Q96RN5 788 aa4.66□□□□□ -1.66
HMGB3P22-202ENST00000451823 SEC62Q99442 399 aaKnown RBP4.66□□□□□ -1.66
HMGB3P22-202ENST00000451823 HAUS7Q99871 368 aa4.66□□□□□ -1.66
HMGB3P22-202ENST00000451823 SDF4Q9BRK5 362 aa4.66□□□□□ -1.66
HMGB3P22-202ENST00000451823 FSD1Q9BTV5 496 aa4.66□□□□□ -1.66
HMGB3P22-202ENST00000451823 GBP3Q9H0R5 595 aa4.66□□□□□ -1.66
HMGB3P22-202ENST00000451823 BOLA2Q9H3K6 86 aa4.66□□□□□ -1.66
HMGB3P22-202ENST00000451823 VPS18Q9P253 973 aa4.66□□□□□ -1.66
HMGB3P22-202ENST00000451823 CHPF2Q9P2E5 772 aa4.66□□□□□ -1.66
HMGB3P22-202ENST00000451823 GULP1Q9UBP9 304 aa4.66□□□□□ -1.66
HMGB3P22-202ENST00000451823 FBLN5Q9UBX5 448 aa4.66□□□□□ -1.66
HMGB3P22-202ENST00000451823 CLIC4Q9Y696 253 aa4.66□□□□□ -1.66
HMGB3P22-202ENST00000451823 CAMTA1Q9Y6Y1 1673 aa4.66□□□□□ -1.66
HMGB3P22-202ENST00000451823 WDR17Q8IZU2 1322 aa4.66□□□□□ -1.66
HMGB3P22-202ENST00000451823 WDR19Q8NEZ3 1342 aa4.66□□□□□ -1.66
HMGB3P22-202ENST00000451823 PARP4Q9UKK3 1724 aaKnown RBP4.66□□□□□ -1.66
HMGB3P22-202ENST00000451823 LRRIQ3A6PVS8 624 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 KIF28PB7ZC32 967 aa4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 GRM8O00222 908 aa4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 ERLIN1O75477 346 aa4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 FUCA1P04066 466 aa4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 HOXC9P31274 260 aa4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 ARHGAP25P42331 645 aa4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 FNTAP49354 379 aa4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 AMPHP49418 695 aa4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 SEPHS1P49903 392 aa4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 VSNL1P62760 191 aa4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 KIF23Q02241 960 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 CEBPZQ03701 1054 aaKnown RBP4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 GOLGA8FQ08AF8 430 aa4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 GOLGA8DPQ0D2H9 430 aa4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 G3BP1Q13283 466 aaKnown RBP eCLIP4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 STK38Q15208 465 aa4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 RABL6Q3YEC7 729 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 MCMDC2Q4G0Z9 681 aa4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 RESP18Q5W5W9 173 aa4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 ANO1Q5XXA6 986 aa4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 SPECC1LQ69YQ0 1117 aa4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 RCSD1Q6JBY9 416 aa4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 KCNV1Q6PIU1 500 aa4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 SHC4Q6S5L8 630 aa4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 RAD9BQ6WBX8 426 aa4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 TTLL7Q6ZT98 887 aa4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 CCDC91Q7Z6B0 441 aa4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 CABP7Q86V35 215 aa4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 METTL16Q86W50 562 aaKnown RBP4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 CNNM3Q8NE01 707 aa4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 CTCFLQ8NI51 663 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 SPATA20Q8TB22 786 aa4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 STAG1Q8WVM7 1258 aa4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 KAT2BQ92831 832 aa4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 SECISBP2LQ93073 1101 aaKnown RBP4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 ZBTB9Q96C00 473 aa4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 MRRFQ96E11 262 aaKnown RBP4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 BORCS6Q96GS4 357 aa4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 PEX11GQ96HA9 241 aa4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 MAP3K14Q99558 947 aa4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 SYT3Q9BQG1 590 aa4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 TACO1Q9BSH4 297 aaKnown RBP4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 PAGR1Q9BTK6 254 aa4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 NAA15Q9BXJ9 866 aaKnown RBP4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 FAM107BQ9H098 131 aa4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 CCDC8Q9H0W5 538 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 HELLSQ9NRZ9 838 aa4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 GINM1Q9NU53 330 aa4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 FANCLQ9NW38 375 aa4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 DONSONQ9NYP3 566 aa4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 WHRNQ9P202 907 aa4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 DBF4Q9UBU7 674 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 DBNLQ9UJU6 430 aaKnown RBP4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 SIT1Q9Y3P8 196 aa4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 SLIT3O75094 1523 aa4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 CDHR2Q9BYE9 1310 aa4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 ECM29Q5VYK3 1845 aa4.65□□□□□ -1.67
HMGB3P22-202ENST00000451823 UBR1Q8IWV7 1749 aa4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 NFAT5O94916 1531 aa4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 TARSL2A2RTX5 802 aaKnown RBP4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 UNCXA6NJT0 531 aa4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 E7EWF7 191 aa4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 AGPSO00116 658 aa4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 STXBP3O00186 592 aa4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 EXOC5O00471 708 aa4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 SH2B2O14492 632 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 CLGNO14967 610 aa4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 FOXP2O15409 715 aa4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 KCNQ3O43525 872 aa4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 KIF1CO43896 1103 aaKnown RBP4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 PPM1BO75688 479 aa4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 ZBTB7AO95365 584 aa4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 NTRK1P04629 796 aa4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 IGKV5-2P06315 115 aa4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 CCDC175P0C221 793 aa4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 CCDC172P0C7W6 258 aa4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 PAMP19021 973 aa4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 MAGEA10P43363 369 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 USP14P54578 494 aa4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 CACNB2Q08289 660 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P22-202ENST00000451823 DDR1Q08345 913 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms