RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 PTPRZ1P23471 2315 aaPredicted RBP16.1■□□□□ 0.17
USP39-206ENST00000448971 TBKBP1A7MCY6 615 aa16.1■□□□□ 0.17
USP39-206ENST00000448971 HOXA2O43364 376 aa16.1■□□□□ 0.17
USP39-206ENST00000448971 FGFR1P11362 822 aa16.1■□□□□ 0.17
USP39-206ENST00000448971 RAB27AP51159 221 aa16.1■□□□□ 0.17
USP39-206ENST00000448971 MBTD1Q05BQ5 628 aa16.1■□□□□ 0.17
USP39-206ENST00000448971 PKP1Q13835 747 aa16.1■□□□□ 0.17
USP39-206ENST00000448971 KARSQ15046 597 aaKnown RBP16.1■□□□□ 0.17
USP39-206ENST00000448971 PPP2R5AQ15172 486 aa16.1■□□□□ 0.17
USP39-206ENST00000448971 TMEM119Q4V9L6 283 aa16.1■□□□□ 0.17
USP39-206ENST00000448971 ECHDC2Q86YB7 292 aa16.1■□□□□ 0.17
USP39-206ENST00000448971 PRSS33Q8NF86 280 aa16.1■□□□□ 0.17
USP39-206ENST00000448971 DEPTORQ8TB45 409 aa16.1■□□□□ 0.17
USP39-206ENST00000448971 KIFAP3Q92845 792 aa16.1■□□□□ 0.17
USP39-206ENST00000448971 RNF25Q96BH1 459 aaPredicted RBP16.1■□□□□ 0.17
USP39-206ENST00000448971 IFT74Q96LB3 600 aa16.1■□□□□ 0.17
USP39-206ENST00000448971 RUSC1Q9BVN2 902 aa16.1■□□□□ 0.17
USP39-206ENST00000448971 CSRNP2Q9H175 543 aa16.1■□□□□ 0.17
USP39-206ENST00000448971 FBXO2Q9UK22 296 aaPredicted RBP16.1■□□□□ 0.17
USP39-206ENST00000448971 ZFHX2Q9C0A1 2572 aaPredicted RBP16.1■□□□□ 0.17
USP39-206ENST00000448971 FNDC1Q4ZHG4 1894 aaPredicted RBP16.1■□□□□ 0.17
USP39-206ENST00000448971 TMEM221A6NGB7 291 aa16.09■□□□□ 0.17
USP39-206ENST00000448971 M0R296 226 aa16.09■□□□□ 0.17
USP39-206ENST00000448971 SLC26A4O43511 780 aa16.09■□□□□ 0.17
USP39-206ENST00000448971 TSPAN1O60635 241 aa16.09■□□□□ 0.17
USP39-206ENST00000448971 LIG1P18858 919 aa16.09■□□□□ 0.17
USP39-206ENST00000448971 NAMPTP43490 491 aa16.09■□□□□ 0.17
USP39-206ENST00000448971 NASPP49321 788 aaPredicted RBP16.09■□□□□ 0.17
USP39-206ENST00000448971 ZXDAP98168 799 aa16.09■□□□□ 0.17
USP39-206ENST00000448971 POU5F1BQ06416 359 aa16.09■□□□□ 0.17
USP39-206ENST00000448971 NCBP1Q09161 790 aaKnown RBP16.09■□□□□ 0.17
USP39-206ENST00000448971 PCBP1Q15365 356 aaKnown RBP eCLIP16.09■□□□□ 0.17
USP39-206ENST00000448971 TMEM132AQ24JP5 1023 aa16.09■□□□□ 0.17
USP39-206ENST00000448971 SPECC1Q5M775 1068 aa16.09■□□□□ 0.17
USP39-206ENST00000448971 SPOUT1Q5T280 376 aaKnown RBP16.09■□□□□ 0.17
USP39-206ENST00000448971 KCTD17Q8N5Z5 321 aa16.09■□□□□ 0.17
USP39-206ENST00000448971 BSNDQ8WZ55 320 aa16.09■□□□□ 0.17
USP39-206ENST00000448971 PBXIP1Q96AQ6 731 aa16.09■□□□□ 0.17
USP39-206ENST00000448971 DRC1Q96MC2 740 aa16.09■□□□□ 0.17
USP39-206ENST00000448971 NFKBIZQ9BYH8 718 aa16.09■□□□□ 0.17
USP39-206ENST00000448971 C2orf40Q9H1Z8 148 aa16.09■□□□□ 0.17
USP39-206ENST00000448971 FAM105AQ9NUU6 356 aa16.09■□□□□ 0.17
USP39-206ENST00000448971 BARX2Q9UMQ3 279 aaPredicted RBP16.09■□□□□ 0.17
USP39-206ENST00000448971 USP15Q9Y4E8 981 aaPredicted RBP16.09■□□□□ 0.17
USP39-206ENST00000448971 MYO10Q9HD67 2058 aa16.09■□□□□ 0.17
USP39-206ENST00000448971 A0A0U1RQF3 1178 aa16.08■□□□□ 0.16
USP39-206ENST00000448971 HIP1RO75146 1068 aa16.08■□□□□ 0.16
USP39-206ENST00000448971 PLA2G4BP0C869 781 aa16.08■□□□□ 0.16
USP39-206ENST00000448971 SKIP12755 728 aa16.08■□□□□ 0.16
USP39-206ENST00000448971 PLCG1P19174 1290 aa16.08■□□□□ 0.16
USP39-206ENST00000448971 RBM10P98175 930 aaKnown RBP16.08■□□□□ 0.16
USP39-206ENST00000448971 RAD51AP2Q09MP3 1159 aa16.08■□□□□ 0.16
USP39-206ENST00000448971 DMP1Q13316 513 aaPredicted RBP16.08■□□□□ 0.16
USP39-206ENST00000448971 SLC39A14Q15043 492 aa16.08■□□□□ 0.16
USP39-206ENST00000448971 CDCA2Q69YH5 1023 aaPredicted RBP16.08■□□□□ 0.16
USP39-206ENST00000448971 RINT1Q6NUQ1 792 aa16.08■□□□□ 0.16
USP39-206ENST00000448971 NOTUMQ6P988 496 aa16.08■□□□□ 0.16
USP39-206ENST00000448971 LRRC43Q8N309 656 aa16.08■□□□□ 0.16
USP39-206ENST00000448971 KRI1Q8N9T8 703 aaKnown RBP16.08■□□□□ 0.16
USP39-206ENST00000448971 VN1R2Q8NFZ6 395 aa16.08■□□□□ 0.16
USP39-206ENST00000448971 SUSD6Q92537 303 aa16.08■□□□□ 0.16
USP39-206ENST00000448971 CPB2Q96IY4 423 aa16.08■□□□□ 0.16
USP39-206ENST00000448971 CLIC6Q96NY7 704 aa16.08■□□□□ 0.16
USP39-206ENST00000448971 KIFC3Q9BVG8 833 aa16.08■□□□□ 0.16
USP39-206ENST00000448971 PHF7Q9BWX1 381 aaPredicted RBP16.08■□□□□ 0.16
USP39-206ENST00000448971 TMEM117Q9H0C3 514 aa16.08■□□□□ 0.16
USP39-206ENST00000448971 TLE6Q9H808 572 aa16.08■□□□□ 0.16
USP39-206ENST00000448971 POLD4Q9HCU8 107 aa16.08■□□□□ 0.16
USP39-206ENST00000448971 DAXXQ9UER7 740 aaPredicted RBP16.08■□□□□ 0.16
USP39-206ENST00000448971 CCDC39Q9UFE4 941 aa16.08■□□□□ 0.16
USP39-206ENST00000448971 SRPRBQ9Y5M8 271 aaKnown RBP16.08■□□□□ 0.16
USP39-206ENST00000448971 PER2O15055 1255 aa16.07■□□□□ 0.16
USP39-206ENST00000448971 ATF7P17544 494 aaPredicted RBP16.07■□□□□ 0.16
USP39-206ENST00000448971 AXLP30530 894 aa16.07■□□□□ 0.16
USP39-206ENST00000448971 ERVFC1P60507 584 aa16.07■□□□□ 0.16
USP39-206ENST00000448971 FAM189BP81408 668 aa16.07■□□□□ 0.16
USP39-206ENST00000448971 UBE3AQ05086 875 aa16.07■□□□□ 0.16
USP39-206ENST00000448971 KCNC3Q14003 757 aa16.07■□□□□ 0.16
USP39-206ENST00000448971 DHX8Q14562 1220 aaKnown RBP16.07■□□□□ 0.16
USP39-206ENST00000448971 LONRF3Q496Y0 759 aa16.07■□□□□ 0.16
USP39-206ENST00000448971 SYT2Q8N9I0 419 aaPredicted RBP16.07■□□□□ 0.16
USP39-206ENST00000448971 HELQQ8TDG4 1101 aa16.07■□□□□ 0.16
USP39-206ENST00000448971 TIPINQ9BVW5 301 aa16.07■□□□□ 0.16
USP39-206ENST00000448971 TRIM6Q9C030 488 aaPredicted RBP16.07■□□□□ 0.16
USP39-206ENST00000448971 PRMT7Q9NVM4 692 aaPredicted RBP16.07■□□□□ 0.16
USP39-206ENST00000448971 TFIP11Q9UBB9 837 aaKnown RBP16.07■□□□□ 0.16
USP39-206ENST00000448971 RIF1Q5UIP0 2472 aaKnown RBP16.06■□□□□ 0.16
USP39-206ENST00000448971 PHLPP2Q6ZVD8 1323 aa16.06■□□□□ 0.16
USP39-206ENST00000448971 CCDC169A6NNP5 214 aa16.06■□□□□ 0.16
USP39-206ENST00000448971 SPTLC2O15270 562 aa16.06■□□□□ 0.16
USP39-206ENST00000448971 B4GALT5O43286 388 aa16.06■□□□□ 0.16
USP39-206ENST00000448971 YEATS4O95619 227 aa16.06■□□□□ 0.16
USP39-206ENST00000448971 EOMESO95936 686 aa16.06■□□□□ 0.16
USP39-206ENST00000448971 PRKCBP05771 671 aa16.06■□□□□ 0.16
USP39-206ENST00000448971 KRT18P05783 430 aaKnown RBP16.06■□□□□ 0.16
USP39-206ENST00000448971 GUCY2CP25092 1073 aa16.06■□□□□ 0.16
USP39-206ENST00000448971 SLC12A3P55017 1021 aa16.06■□□□□ 0.16
USP39-206ENST00000448971 PEX3P56589 373 aa16.06■□□□□ 0.16
USP39-206ENST00000448971 TCF15Q12870 199 aa16.06■□□□□ 0.16
USP39-206ENST00000448971 MAPK6Q16659 721 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms