RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 POTEFA5A3E0 1075 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 HNRNPCL1O60812 293 aaKnown RBP10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 CCDC22O60826 627 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 POTEIP0CG38 1075 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 POTEJP0CG39 1038 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 VCAM1P19320 739 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 CDK7P50613 346 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 NEK3P51956 506 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 COASYQ13057 564 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 MOGSQ13724 837 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 KYNUQ16719 465 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 PHLDB3Q6NSJ2 640 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 POTEEQ6S8J3 1075 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 SPATA24Q86W54 205 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 KBTBD2Q8IY47 623 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 ST13P4Q8IZP2 240 aaPredicted RBP10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 PNMA5Q96PV4 448 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 SPZ1Q9BXG8 430 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 HDAC9Q9UKV0 1011 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 SYNGAP1Q96PV0 1343 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 FAM47DPA6NHR8 397 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 GYG2O15488 501 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 OATP04181 439 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 KCNA6P17658 529 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 KCNJ1P48048 391 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 WDR4P57081 412 aaKnown RBP10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 PPATQ06203 517 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 NONOQ15233 471 aaKnown RBP eCLIP10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 CFAP157Q5JU67 520 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 OLFML2BQ68BL8 750 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 MARK2Q7KZI7 788 aaKnown RBP10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 KRT82Q9NSB4 513 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 LNPEPQ9UIQ6 1025 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 NAALADL1Q9UQQ1 740 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 MTMR7Q9Y216 660 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 PCDHA3Q9Y5H8 950 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 NPHP3-ACAD11A0A0J9YXS1 232 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 RASA4BC9J798 803 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 RASA4O43374 803 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 THAP12O43422 761 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 GFPT2O94808 682 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 ASLP04424 464 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 ITGA2BP08514 1039 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 HOXA7P31268 230 aaPredicted RBP10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 CTTNQ14247 550 aaKnown RBP10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 CYFIP1Q7L576 1253 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 MTDHQ86UE4 582 aaKnown RBP10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 NME8Q8N427 588 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 RAD54LQ92698 747 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 ABTB1Q969K4 478 aaPredicted RBP10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 LENG1Q96BZ8 264 aaPredicted RBP10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 SAR1AQ9NR31 198 aa10.07□□□□□ -0.8
SYNPO2-204ENST00000448416 A6NJR5 290 aa10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 HNRNPCP07910 306 aaKnown RBP eCLIP10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 PON1P27169 355 aa10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 MARSP56192 900 aaKnown RBP10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 UBE4AQ14139 1066 aa10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 DAB2IPQ5VWQ8 1189 aa10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 NLRP9Q7RTR0 991 aa10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 ADGRA1Q86SQ6 560 aa10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 GLYCTKQ8IVS8 523 aa10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 BTBD10Q9BSF8 475 aa10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 RMI1Q9H9A7 625 aa10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 IL1RAPL1Q9NZN1 696 aa10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 CIDEBQ9UHD4 219 aa10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 TSPY2A6NKD2 308 aa10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 GSC2O15499 205 aa10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 OPHN1O60890 802 aa10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 SPAG7O75391 227 aa10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 TTC4O95801 387 aa10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 VAV1P15498 845 aa10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 CTSWP56202 376 aa10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 MPP3Q13368 585 aa10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 P3H1Q32P28 736 aa10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 TCERG1LQ5VWI1 586 aa10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 NEK8Q86SG6 692 aa10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 RIBC1Q8N443 379 aaPredicted RBP10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 UBL4BQ8N7F7 174 aa10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 PDCD7Q8N8D1 485 aaKnown RBP10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 NAT14Q8WUY8 206 aa10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 MPP4Q96JB8 637 aa10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 NENFQ9UMX5 172 aa10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 USP17L12C9JPN9 530 aa10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 USP17L21D6R901 530 aa10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 EXOC3O60645 756 aa10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 CDH16O75309 829 aa10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 ZWINTO95229 277 aa10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 TMEM253P0C7T8 217 aa10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 SERPINB3P29508 390 aa10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 TRIM28Q13263 835 aaKnown RBP10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 SPARCL1Q14515 664 aa10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 SLC45A4Q5BKX6 768 aa10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 SEL1L2Q5TEA6 688 aa10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 IZUMO2Q6UXV1 221 aa10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 KRT25Q7Z3Z0 450 aa10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 DAGLBQ8NCG7 672 aa10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 SNX29Q8TEQ0 813 aa10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 C10orf82Q8WW14 230 aa10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 YIPF2Q9BWQ6 316 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms