RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 CCDC39Q9UFE4 941 aa27.55■■■□□ 2
UFD1-204ENST00000447868 K7ERI5 159 aa27.54■■■□□ 2
UFD1-204ENST00000447868 SPTLC2O15270 562 aa27.54■■■□□ 2
UFD1-204ENST00000447868 RNASELQ05823 741 aaKnown RBP27.54■■■□□ 2
UFD1-204ENST00000447868 CSPP1Q1MSJ5 1256 aa27.54■■■□□ 2
UFD1-204ENST00000447868 POF1BQ8WVV4 589 aa27.54■■■□□ 2
UFD1-204ENST00000447868 GBP3Q9H0R5 595 aa27.54■■■□□ 2
UFD1-204ENST00000447868 PDZD7Q9H5P4 517 aa27.54■■■□□ 2
UFD1-204ENST00000447868 NSUN3Q9H649 340 aaKnown RBP27.54■■■□□ 2
UFD1-204ENST00000447868 C17orf75Q9HAS0 396 aa27.54■■■□□ 2
UFD1-204ENST00000447868 THEGQ9P2T0 379 aa27.54■■■□□ 2
UFD1-204ENST00000447868 N4BP3O15049 544 aa27.53■■■□□ 2
UFD1-204ENST00000447868 SLC16A4O15374 487 aa27.53■■■□□ 2
UFD1-204ENST00000447868 ZC3H11AO75152 810 aaKnown RBP eCLIP27.53■■■□□ 2
UFD1-204ENST00000447868 PLS3P13797 630 aa27.53■■■□□ 2
UFD1-204ENST00000447868 AFF1P51825 1210 aaKnown RBP27.53■■■□□ 2
UFD1-204ENST00000447868 CAMK1Q14012 370 aa27.53■■■□□ 2
UFD1-204ENST00000447868 TCEAL5Q5H9L2 206 aa27.53■■■□□ 2
UFD1-204ENST00000447868 RSPH1Q8WYR4 309 aa27.53■■■□□ 2
UFD1-204ENST00000447868 LARP4BQ92615 738 aaKnown RBP27.53■■■□□ 2
UFD1-204ENST00000447868 UBN1Q9NPG3 1134 aa27.53■■■□□ 2
UFD1-204ENST00000447868 UNC80Q8N2C7 3258 aa27.52■■■□□ 2
UFD1-204ENST00000447868 MYO7AQ13402 2215 aa27.52■■■□□ 2
UFD1-204ENST00000447868 PHLPP2Q6ZVD8 1323 aa27.52■■■□□ 2
UFD1-204ENST00000447868 POMCP01189 267 aa27.52■■■□□ 2
UFD1-204ENST00000447868 KRT18P05783 430 aaKnown RBP27.52■■■□□ 2
UFD1-204ENST00000447868 AKAP5P24588 427 aa27.52■■■□□ 2
UFD1-204ENST00000447868 BCAR1P56945 870 aa27.52■■■□□ 2
UFD1-204ENST00000447868 BECN1Q14457 450 aa27.52■■■□□ 2
UFD1-204ENST00000447868 NT5DC1Q5TFE4 455 aa27.52■■■□□ 2
UFD1-204ENST00000447868 RRAGBQ5VZM2 374 aa27.52■■■□□ 2
UFD1-204ENST00000447868 HACE1Q8IYU2 909 aa27.52■■■□□ 2
UFD1-204ENST00000447868 REEP2Q9BRK0 252 aa27.52■■■□□ 2
UFD1-204ENST00000447868 NT5C1B-RDH14C9J2C7 533 aa27.51■■□□□ 1.99
UFD1-204ENST00000447868 PPP6R2O75170 966 aa27.51■■□□□ 1.99
UFD1-204ENST00000447868 YEATS4O95619 227 aa27.51■■□□□ 1.99
UFD1-204ENST00000447868 DDIT3P35638 169 aa27.51■■□□□ 1.99
UFD1-204ENST00000447868 MLH1P40692 756 aa27.51■■□□□ 1.99
UFD1-204ENST00000447868 ALDH7A1P49419 539 aaKnown RBP27.51■■□□□ 1.99
UFD1-204ENST00000447868 EEF1DP3Q658K8 133 aa27.51■■□□□ 1.99
UFD1-204ENST00000447868 GAD1Q99259 594 aa27.51■■□□□ 1.99
UFD1-204ENST00000447868 ADPGKQ9BRR6 497 aa27.51■■□□□ 1.99
UFD1-204ENST00000447868 PANK2Q9BZ23 570 aa27.51■■□□□ 1.99
UFD1-204ENST00000447868 NRDE2Q9H7Z3 1164 aa27.51■■□□□ 1.99
UFD1-204ENST00000447868 SPG21Q9NZD8 308 aa27.51■■□□□ 1.99
UFD1-204ENST00000447868 ARHGAP28Q9P2N2 729 aa27.51■■□□□ 1.99
UFD1-204ENST00000447868 PARP2Q9UGN5 583 aa27.51■■□□□ 1.99
UFD1-204ENST00000447868 RBM19Q9Y4C8 960 aaKnown RBP27.51■■□□□ 1.99
UFD1-204ENST00000447868 ARL5CA6NH57 179 aa27.5■■□□□ 1.99
UFD1-204ENST00000447868 IRS1P35568 1242 aa27.5■■□□□ 1.99
UFD1-204ENST00000447868 PPM1AP35813 382 aa27.5■■□□□ 1.99
UFD1-204ENST00000447868 SMTNP53814 917 aa27.5■■□□□ 1.99
UFD1-204ENST00000447868 ATF7IP2Q5U623 682 aa27.5■■□□□ 1.99
UFD1-204ENST00000447868 TAS1R3Q7RTX0 852 aa27.5■■□□□ 1.99
UFD1-204ENST00000447868 ZNF280BQ86YH2 543 aa27.5■■□□□ 1.99
UFD1-204ENST00000447868 SPIRE2Q8WWL2 714 aa27.5■■□□□ 1.99
UFD1-204ENST00000447868 ZFP42Q96MM3 310 aa27.5■■□□□ 1.99
UFD1-204ENST00000447868 TMEM134Q9H6X4 195 aa27.5■■□□□ 1.99
UFD1-204ENST00000447868 KANSL3Q9P2N6 904 aa27.5■■□□□ 1.99
UFD1-204ENST00000447868 DNAJB4Q9UDY4 337 aa27.5■■□□□ 1.99
UFD1-204ENST00000447868 STK17AQ9UEE5 414 aa27.5■■□□□ 1.99
UFD1-204ENST00000447868 ODF2LQ9ULJ1 636 aa27.5■■□□□ 1.99
UFD1-204ENST00000447868 PLCB3Q01970 1234 aa27.49■■□□□ 1.99
UFD1-204ENST00000447868 TFF2Q03403 129 aa27.49■■□□□ 1.99
UFD1-204ENST00000447868 UBE3AQ05086 875 aa27.49■■□□□ 1.99
UFD1-204ENST00000447868 DNM1Q05193 864 aaKnown RBP27.49■■□□□ 1.99
UFD1-204ENST00000447868 SLC39A11Q8N1S5 342 aa27.49■■□□□ 1.99
UFD1-204ENST00000447868 MICAL1Q8TDZ2 1067 aa27.49■■□□□ 1.99
UFD1-204ENST00000447868 HLA-CQ95604 372 aa27.49■■□□□ 1.99
UFD1-204ENST00000447868 FAM193BQ96PV7 902 aaPredicted RBP27.49■■□□□ 1.99
UFD1-204ENST00000447868 ZHX3Q9H4I2 956 aa27.49■■□□□ 1.99
UFD1-204ENST00000447868 KLK14Q9P0G3 267 aa27.49■■□□□ 1.99
UFD1-204ENST00000447868 GIT1Q9Y2X7 761 aa27.49■■□□□ 1.99
UFD1-204ENST00000447868 PCDHGC5Q9Y5F6 944 aa27.49■■□□□ 1.99
UFD1-204ENST00000447868 B4GALT3O60512 393 aa27.48■■□□□ 1.99
UFD1-204ENST00000447868 DDHD2O94830 711 aa27.48■■□□□ 1.99
UFD1-204ENST00000447868 FAM13AO94988 1023 aa27.48■■□□□ 1.99
UFD1-204ENST00000447868 SCNN1GP51170 649 aa27.48■■□□□ 1.99
UFD1-204ENST00000447868 KRT17Q04695 432 aa27.48■■□□□ 1.99
UFD1-204ENST00000447868 GIT2Q14161 759 aa27.48■■□□□ 1.99
UFD1-204ENST00000447868 MYCT1Q8N699 235 aa27.48■■□□□ 1.99
UFD1-204ENST00000447868 MRPS27Q92552 414 aaKnown RBP27.48■■□□□ 1.99
UFD1-204ENST00000447868 NTPCRQ9BSD7 190 aaKnown RBP27.48■■□□□ 1.99
UFD1-204ENST00000447868 MRPL4Q9BYD3 311 aaKnown RBP27.48■■□□□ 1.99
UFD1-204ENST00000447868 TLR9Q9NR96 1032 aa27.48■■□□□ 1.99
UFD1-204ENST00000447868 SNTG2Q9NY99 539 aa27.48■■□□□ 1.99
UFD1-204ENST00000447868 LARSQ9P2J5 1176 aaKnown RBP27.48■■□□□ 1.99
UFD1-204ENST00000447868 PUF60Q9UHX1 559 aaKnown RBP27.48■■□□□ 1.99
UFD1-204ENST00000447868 KCNG1Q9UIX4 513 aa27.48■■□□□ 1.99
UFD1-204ENST00000447868 ZDHHC9Q9Y397 364 aa27.48■■□□□ 1.99
UFD1-204ENST00000447868 A0A087X0B3 334 aa27.47■■□□□ 1.99
UFD1-204ENST00000447868 BRD1O95696 1058 aa27.47■■□□□ 1.99
UFD1-204ENST00000447868 STAT6P42226 847 aa27.47■■□□□ 1.99
UFD1-204ENST00000447868 STRN3Q13033 797 aa27.47■■□□□ 1.99
UFD1-204ENST00000447868 CCDC73Q6ZRK6 1079 aa27.47■■□□□ 1.99
UFD1-204ENST00000447868 PDILTQ8N807 584 aa27.47■■□□□ 1.99
UFD1-204ENST00000447868 TMEM161BQ8NDZ6 487 aa27.47■■□□□ 1.99
UFD1-204ENST00000447868 ATXN2LQ8WWM7 1075 aaKnown RBP27.47■■□□□ 1.99
UFD1-204ENST00000447868 ACO2Q99798 780 aaKnown RBP27.47■■□□□ 1.99
UFD1-204ENST00000447868 MIOSQ9NXC5 875 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms