RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 LIMD1Q9UGP4 676 aa17.19■□□□□ 0.34
SEC13-213ENST00000445064 SORCS3Q9UPU3 1222 aa17.19■□□□□ 0.34
SEC13-213ENST00000445064 PRG3Q9Y2Y8 225 aaPredicted RBP17.19■□□□□ 0.34
SEC13-213ENST00000445064 ZNF318Q5VUA4 2279 aa17.19■□□□□ 0.34
SEC13-213ENST00000445064 ARL5CA6NH57 179 aa17.18■□□□□ 0.34
SEC13-213ENST00000445064 SPDYE4A6NLX3 237 aa17.18■□□□□ 0.34
SEC13-213ENST00000445064 C2CD2LO14523 706 aa17.18■□□□□ 0.34
SEC13-213ENST00000445064 JAK2O60674 1132 aa17.18■□□□□ 0.34
SEC13-213ENST00000445064 LYPLA2O95372 231 aa17.18■□□□□ 0.34
SEC13-213ENST00000445064 ASGR2P07307 311 aa17.18■□□□□ 0.34
SEC13-213ENST00000445064 AXLP30530 894 aa17.18■□□□□ 0.34
SEC13-213ENST00000445064 OR1G1P47890 313 aa17.18■□□□□ 0.34
SEC13-213ENST00000445064 CLCN4P51793 760 aa17.18■□□□□ 0.34
SEC13-213ENST00000445064 PTPN5P54829 565 aa17.18■□□□□ 0.34
SEC13-213ENST00000445064 NCBP1Q09161 790 aaKnown RBP17.18■□□□□ 0.34
SEC13-213ENST00000445064 TCF15Q12870 199 aa17.18■□□□□ 0.34
SEC13-213ENST00000445064 CAPSQ13938 189 aa17.18■□□□□ 0.34
SEC13-213ENST00000445064 TFDP1Q14186 410 aa17.18■□□□□ 0.34
SEC13-213ENST00000445064 NOTUMQ6P988 496 aa17.18■□□□□ 0.34
SEC13-213ENST00000445064 DIS3L2Q8IYB7 885 aaKnown RBP17.18■□□□□ 0.34
SEC13-213ENST00000445064 COLGALT2Q8IYK4 626 aa17.18■□□□□ 0.34
SEC13-213ENST00000445064 ASAP3Q8TDY4 903 aa17.18■□□□□ 0.34
SEC13-213ENST00000445064 PIGOQ8TEQ8 1089 aa17.18■□□□□ 0.34
SEC13-213ENST00000445064 GAD1Q99259 594 aa17.18■□□□□ 0.34
SEC13-213ENST00000445064 PRRX2Q99811 253 aa17.18■□□□□ 0.34
SEC13-213ENST00000445064 APOL6Q9BWW8 343 aa17.18■□□□□ 0.34
SEC13-213ENST00000445064 CSRNP2Q9H175 543 aa17.18■□□□□ 0.34
SEC13-213ENST00000445064 MRPL17Q9NRX2 175 aaKnown RBP17.18■□□□□ 0.34
SEC13-213ENST00000445064 ARID2Q68CP9 1835 aa17.17■□□□□ 0.34
SEC13-213ENST00000445064 DGAT1O75907 488 aa17.17■□□□□ 0.34
SEC13-213ENST00000445064 ARL2P36404 184 aa17.17■□□□□ 0.34
SEC13-213ENST00000445064 MLH1P40692 756 aa17.17■□□□□ 0.34
SEC13-213ENST00000445064 NEK4P51957 841 aa17.17■□□□□ 0.34
SEC13-213ENST00000445064 POU5F1BQ06416 359 aa17.17■□□□□ 0.34
SEC13-213ENST00000445064 MTMR3Q13615 1198 aa17.17■□□□□ 0.34
SEC13-213ENST00000445064 AMHR2Q16671 573 aa17.17■□□□□ 0.34
SEC13-213ENST00000445064 GPR149Q86SP6 731 aa17.17■□□□□ 0.34
SEC13-213ENST00000445064 CDR2LQ86X02 465 aaPredicted RBP17.17■□□□□ 0.34
SEC13-213ENST00000445064 IFNLR1Q8IU57 520 aaPredicted RBP17.17■□□□□ 0.34
SEC13-213ENST00000445064 UBALD2Q8IYN6 164 aa17.17■□□□□ 0.34
SEC13-213ENST00000445064 ZDHHC14Q8IZN3 488 aa17.17■□□□□ 0.34
SEC13-213ENST00000445064 PLCD3Q8N3E9 789 aa17.17■□□□□ 0.34
SEC13-213ENST00000445064 TDRD5Q8NAT2 981 aaKnown RBP17.17■□□□□ 0.34
SEC13-213ENST00000445064 ZFP42Q96MM3 310 aa17.17■□□□□ 0.34
SEC13-213ENST00000445064 STK39Q9UEW8 545 aa17.17■□□□□ 0.34
SEC13-213ENST00000445064 WDFY4Q6ZS81 3184 aa17.17■□□□□ 0.34
SEC13-213ENST00000445064 NEMFO60524 1076 aa17.16■□□□□ 0.34
SEC13-213ENST00000445064 SOD2P04179 222 aa17.16■□□□□ 0.34
SEC13-213ENST00000445064 MYBP10242 640 aa17.16■□□□□ 0.34
SEC13-213ENST00000445064 ARF4P18085 180 aaPredicted RBP17.16■□□□□ 0.34
SEC13-213ENST00000445064 ATP2B1P20020 1258 aa17.16■□□□□ 0.34
SEC13-213ENST00000445064 GLRA2P23416 452 aa17.16■□□□□ 0.34
SEC13-213ENST00000445064 RARRES1P49788 294 aa17.16■□□□□ 0.34
SEC13-213ENST00000445064 SCNN1GP51170 649 aa17.16■□□□□ 0.34
SEC13-213ENST00000445064 MBTD1Q05BQ5 628 aa17.16■□□□□ 0.34
SEC13-213ENST00000445064 TRIM29Q14134 588 aa17.16■□□□□ 0.34
SEC13-213ENST00000445064 PCBP1Q15365 356 aaKnown RBP eCLIP17.16■□□□□ 0.34
SEC13-213ENST00000445064 MAEAQ7L5Y9 396 aa17.16■□□□□ 0.34
SEC13-213ENST00000445064 CCDC43Q96MW1 224 aaKnown RBP17.16■□□□□ 0.34
SEC13-213ENST00000445064 MTMR9Q96QG7 549 aa17.16■□□□□ 0.34
SEC13-213ENST00000445064 TMEM60Q9H2L4 133 aa17.16■□□□□ 0.34
SEC13-213ENST00000445064 SFXN1Q9H9B4 322 aa17.16■□□□□ 0.34
SEC13-213ENST00000445064 MARCH5Q9NX47 278 aa17.16■□□□□ 0.34
SEC13-213ENST00000445064 USTQ9Y2C2 406 aa17.16■□□□□ 0.34
SEC13-213ENST00000445064 KMT2EQ8IZD2 1858 aa17.16■□□□□ 0.34
SEC13-213ENST00000445064 MYO10Q9HD67 2058 aa17.16■□□□□ 0.34
SEC13-213ENST00000445064 POTEMA6NI47 508 aa17.15■□□□□ 0.34
SEC13-213ENST00000445064 F8W810 466 aa17.15■□□□□ 0.34
SEC13-213ENST00000445064 B4GALT5O43286 388 aa17.15■□□□□ 0.34
SEC13-213ENST00000445064 AKAP5P24588 427 aa17.15■□□□□ 0.34
SEC13-213ENST00000445064 CCDC51Q96ER9 411 aa17.15■□□□□ 0.34
SEC13-213ENST00000445064 RPS6KC1Q96S38 1066 aa17.15■□□□□ 0.34
SEC13-213ENST00000445064 TRIM6Q9C030 488 aaPredicted RBP17.15■□□□□ 0.34
SEC13-213ENST00000445064 POLR3FQ9H1D9 316 aaPredicted RBP17.15■□□□□ 0.34
SEC13-213ENST00000445064 NXF3Q9H4D5 531 aaKnown RBP17.15■□□□□ 0.34
SEC13-213ENST00000445064 PPP4R2Q9NY27 417 aa17.15■□□□□ 0.34
SEC13-213ENST00000445064 INPPL1O15357 1258 aa17.14■□□□□ 0.33
SEC13-213ENST00000445064 USO1O60763 962 aaKnown RBP17.14■□□□□ 0.33
SEC13-213ENST00000445064 NPTXRO95502 500 aa17.14■□□□□ 0.33
SEC13-213ENST00000445064 URODP06132 367 aa17.14■□□□□ 0.33
SEC13-213ENST00000445064 SPATA31C1P0DKV0 1188 aa17.14■□□□□ 0.33
SEC13-213ENST00000445064 XRCC6P12956 609 aaKnown RBP eCLIP17.14■□□□□ 0.33
SEC13-213ENST00000445064 MCM7P33993 719 aa17.14■□□□□ 0.33
SEC13-213ENST00000445064 GUCY1B3Q02153 619 aa17.14■□□□□ 0.33
SEC13-213ENST00000445064 DSC1Q08554 894 aa17.14■□□□□ 0.33
SEC13-213ENST00000445064 KIAA0319Q5VV43 1072 aa17.14■□□□□ 0.33
SEC13-213ENST00000445064 HERC2P3Q9BVR0 1158 aa17.14■□□□□ 0.33
SEC13-213ENST00000445064 GPRC5CQ9NQ84 441 aa17.14■□□□□ 0.33
SEC13-213ENST00000445064 FAM86C1Q9NVL1 165 aa17.14■□□□□ 0.33
SEC13-213ENST00000445064 KLK14Q9P0G3 267 aa17.14■□□□□ 0.33
SEC13-213ENST00000445064 SSX2IPQ9Y2D8 614 aa17.14■□□□□ 0.33
SEC13-213ENST00000445064 GIT1Q9Y2X7 761 aa17.14■□□□□ 0.33
SEC13-213ENST00000445064 TEX28O15482 410 aa17.13■□□□□ 0.33
SEC13-213ENST00000445064 NR1I2O75469 434 aa17.13■□□□□ 0.33
SEC13-213ENST00000445064 EFEMP2O95967 443 aa17.13■□□□□ 0.33
SEC13-213ENST00000445064 GLUD2P49448 558 aa17.13■□□□□ 0.33
SEC13-213ENST00000445064 ST3GAL1Q11201 340 aa17.13■□□□□ 0.33
SEC13-213ENST00000445064 SLC27A1Q6PCB7 646 aa17.13■□□□□ 0.33
SEC13-213ENST00000445064 CATSPER3Q86XQ3 398 aa17.13■□□□□ 0.33
SEC13-213ENST00000445064 RNF168Q8IYW5 571 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms