RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 IFT74Q96LB3 600 aa22.21■■□□□ 1.15
LRCH3-208ENST00000443727 C1QTNF1Q9BXJ1 281 aa22.21■■□□□ 1.15
LRCH3-208ENST00000443727 HES2Q9Y543 173 aa22.21■■□□□ 1.15
LRCH3-208ENST00000443727 PP2D1A8MPX8 630 aa22.2■■□□□ 1.14
LRCH3-208ENST00000443727 NPTXRO95502 500 aa22.2■■□□□ 1.14
LRCH3-208ENST00000443727 ALDH2P05091 517 aa22.2■■□□□ 1.14
LRCH3-208ENST00000443727 MLH1P40692 756 aa22.2■■□□□ 1.14
LRCH3-208ENST00000443727 AFF1P51825 1210 aaKnown RBP22.2■■□□□ 1.14
LRCH3-208ENST00000443727 RBM10P98175 930 aaKnown RBP22.2■■□□□ 1.14
LRCH3-208ENST00000443727 COASYQ13057 564 aa22.2■■□□□ 1.14
LRCH3-208ENST00000443727 CDCA2Q69YH5 1023 aaPredicted RBP22.2■■□□□ 1.14
LRCH3-208ENST00000443727 DDX53Q86TM3 631 aaKnown RBP22.2■■□□□ 1.14
LRCH3-208ENST00000443727 TMEM173Q86WV6 379 aaPredicted RBP22.2■■□□□ 1.14
LRCH3-208ENST00000443727 CDR2LQ86X02 465 aaPredicted RBP22.2■■□□□ 1.14
LRCH3-208ENST00000443727 ADHFE1Q8IWW8 467 aa22.2■■□□□ 1.14
LRCH3-208ENST00000443727 KIFAP3Q92845 792 aa22.2■■□□□ 1.14
LRCH3-208ENST00000443727 PRIMPOLQ96LW4 560 aa22.2■■□□□ 1.14
LRCH3-208ENST00000443727 GAD1Q99259 594 aa22.2■■□□□ 1.14
LRCH3-208ENST00000443727 POP1Q99575 1024 aaKnown RBP22.2■■□□□ 1.14
LRCH3-208ENST00000443727 RNF39Q9H2S5 420 aa22.2■■□□□ 1.14
LRCH3-208ENST00000443727 FAN1Q9Y2M0 1017 aa22.2■■□□□ 1.14
LRCH3-208ENST00000443727 A0A1B0GUA9 196 aa22.19■■□□□ 1.14
LRCH3-208ENST00000443727 C2orf71A6NGG8 1288 aa22.19■■□□□ 1.14
LRCH3-208ENST00000443727 ARL5CA6NH57 179 aa22.19■■□□□ 1.14
LRCH3-208ENST00000443727 DDHD2O94830 711 aa22.19■■□□□ 1.14
LRCH3-208ENST00000443727 EYA4O95677 639 aa22.19■■□□□ 1.14
LRCH3-208ENST00000443727 CDC25AP30304 524 aa22.19■■□□□ 1.14
LRCH3-208ENST00000443727 NAMPTP43490 491 aa22.19■■□□□ 1.14
LRCH3-208ENST00000443727 ATP2C1P98194 919 aaPredicted RBP22.19■■□□□ 1.14
LRCH3-208ENST00000443727 ZP2Q05996 745 aa22.19■■□□□ 1.14
LRCH3-208ENST00000443727 PRPF4BQ13523 1007 aaKnown RBP22.19■■□□□ 1.14
LRCH3-208ENST00000443727 IL17AQ16552 155 aa22.19■■□□□ 1.14
LRCH3-208ENST00000443727 MAPK6Q16659 721 aa22.19■■□□□ 1.14
LRCH3-208ENST00000443727 PPP4R3CPQ6ZMV5 832 aa22.19■■□□□ 1.14
LRCH3-208ENST00000443727 SMRP1Q8NCR6 262 aa22.19■■□□□ 1.14
LRCH3-208ENST00000443727 VN1R2Q8NFZ6 395 aa22.19■■□□□ 1.14
LRCH3-208ENST00000443727 BSNDQ8WZ55 320 aa22.19■■□□□ 1.14
LRCH3-208ENST00000443727 TMEM175Q9BSA9 504 aa22.19■■□□□ 1.14
LRCH3-208ENST00000443727 NXF3Q9H4D5 531 aaKnown RBP22.19■■□□□ 1.14
LRCH3-208ENST00000443727 EPHX3Q9H6B9 360 aa22.19■■□□□ 1.14
LRCH3-208ENST00000443727 POLD4Q9HCU8 107 aa22.19■■□□□ 1.14
LRCH3-208ENST00000443727 PARP2Q9UGN5 583 aa22.19■■□□□ 1.14
LRCH3-208ENST00000443727 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.18■■□□□ 1.14
LRCH3-208ENST00000443727 E9PMD0 336 aa22.18■■□□□ 1.14
LRCH3-208ENST00000443727 NR1I2O75469 434 aa22.18■■□□□ 1.14
LRCH3-208ENST00000443727 BCL7CQ8WUZ0 217 aaPredicted RBP22.18■■□□□ 1.14
LRCH3-208ENST00000443727 ZFP42Q96MM3 310 aa22.18■■□□□ 1.14
LRCH3-208ENST00000443727 FZD8Q9H461 694 aa22.18■■□□□ 1.14
LRCH3-208ENST00000443727 STK39Q9UEW8 545 aa22.18■■□□□ 1.14
LRCH3-208ENST00000443727 GIT1Q9Y2X7 761 aa22.18■■□□□ 1.14
LRCH3-208ENST00000443727 VWA3AA6NCI4 1184 aa22.17■■□□□ 1.14
LRCH3-208ENST00000443727 N4BP3O15049 544 aa22.17■■□□□ 1.14
LRCH3-208ENST00000443727 B4GALT3O60512 393 aa22.17■■□□□ 1.14
LRCH3-208ENST00000443727 PRKCBP05771 671 aa22.17■■□□□ 1.14
LRCH3-208ENST00000443727 AKAP5P24588 427 aa22.17■■□□□ 1.14
LRCH3-208ENST00000443727 OR1G1P47890 313 aa22.17■■□□□ 1.14
LRCH3-208ENST00000443727 SCNN1GP51170 649 aa22.17■■□□□ 1.14
LRCH3-208ENST00000443727 GIT2Q14161 759 aa22.17■■□□□ 1.14
LRCH3-208ENST00000443727 FAM187BQ17R55 369 aa22.17■■□□□ 1.14
LRCH3-208ENST00000443727 AUTS2Q8WXX7 1259 aa22.17■■□□□ 1.14
LRCH3-208ENST00000443727 CDK5RAP3Q96JB5 506 aa22.17■■□□□ 1.14
LRCH3-208ENST00000443727 ZBP1Q9H171 429 aa22.17■■□□□ 1.14
LRCH3-208ENST00000443727 PRG3Q9Y2Y8 225 aaPredicted RBP22.17■■□□□ 1.14
LRCH3-208ENST00000443727 USP15Q9Y4E8 981 aaPredicted RBP22.17■■□□□ 1.14
LRCH3-208ENST00000443727 NRP1O14786 923 aa22.16■■□□□ 1.14
LRCH3-208ENST00000443727 EFNA5P52803 228 aa22.16■■□□□ 1.14
LRCH3-208ENST00000443727 ANKRD54Q6NXT1 300 aa22.16■■□□□ 1.14
LRCH3-208ENST00000443727 TMEM184AQ6ZMB5 413 aa22.16■■□□□ 1.14
LRCH3-208ENST00000443727 CASP10Q92851 521 aa22.16■■□□□ 1.14
LRCH3-208ENST00000443727 KHSRPQ92945 711 aaKnown RBP eCLIP22.16■■□□□ 1.143e-9■■■□□ 18.6
LRCH3-208ENST00000443727 RPS6KC1Q96S38 1066 aa22.16■■□□□ 1.14
LRCH3-208ENST00000443727 ADPGKQ9BRR6 497 aa22.16■■□□□ 1.14
LRCH3-208ENST00000443727 KIFC3Q9BVG8 833 aa22.16■■□□□ 1.14
LRCH3-208ENST00000443727 BACH2Q9BYV9 841 aa22.16■■□□□ 1.14
LRCH3-208ENST00000443727 VPS37CA5D8V6 355 aaPredicted RBP22.15■■□□□ 1.14
LRCH3-208ENST00000443727 CCDC169A6NNP5 214 aa22.15■■□□□ 1.14
LRCH3-208ENST00000443727 ACKR2O00590 384 aa22.15■■□□□ 1.14
LRCH3-208ENST00000443727 CLASP2O75122 1294 aaKnown RBP22.15■■□□□ 1.14
LRCH3-208ENST00000443727 SSBP05455 408 aaKnown RBP eCLIP22.15■■□□□ 1.14
LRCH3-208ENST00000443727 CTSAP10619 480 aa22.15■■□□□ 1.14
LRCH3-208ENST00000443727 PDCP20941 246 aa22.15■■□□□ 1.14
LRCH3-208ENST00000443727 ARL6IP4Q66PJ3 421 aaKnown RBP22.15■■□□□ 1.14
LRCH3-208ENST00000443727 BRAPQ7Z569 592 aa22.15■■□□□ 1.14
LRCH3-208ENST00000443727 COLGALT2Q8IYK4 626 aa22.15■■□□□ 1.14
LRCH3-208ENST00000443727 MMTAG2Q9BU76 263 aaKnown RBP22.15■■□□□ 1.14
LRCH3-208ENST00000443727 APOL5Q9BWW9 433 aa22.15■■□□□ 1.14
LRCH3-208ENST00000443727 PDZD7Q9H5P4 517 aa22.15■■□□□ 1.14
LRCH3-208ENST00000443727 KLK14Q9P0G3 267 aa22.15■■□□□ 1.14
LRCH3-208ENST00000443727 C19orf67A6NJJ6 358 aa22.14■■□□□ 1.13
LRCH3-208ENST00000443727 INPPL1O15357 1258 aa22.14■■□□□ 1.13
LRCH3-208ENST00000443727 HOXB8P17481 243 aaPredicted RBP22.14■■□□□ 1.13
LRCH3-208ENST00000443727 CUL4AQ13619 759 aa22.14■■□□□ 1.13
LRCH3-208ENST00000443727 DRC1Q96MC2 740 aa22.14■■□□□ 1.13
LRCH3-208ENST00000443727 PLIN2Q99541 437 aa22.14■■□□□ 1.13
LRCH3-208ENST00000443727 CCDC113Q9H0I3 377 aa22.14■■□□□ 1.13
LRCH3-208ENST00000443727 NT5C3AQ9H0P0 336 aa22.14■■□□□ 1.13
LRCH3-208ENST00000443727 MIOSQ9NXC5 875 aa22.14■■□□□ 1.13
LRCH3-208ENST00000443727 USP20Q9Y2K6 914 aa22.14■■□□□ 1.13
LRCH3-208ENST00000443727 HCFC2Q9Y5Z7 792 aa22.14■■□□□ 1.13
LRCH3-208ENST00000443727 TTLL13PA6NNM8 815 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms