RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 TTC7AQ9ULT0 858 aaPredicted RBP13.09□□□□□ -0.31
HDAC8-214ENST00000439122 DIS3Q9Y2L1 958 aaKnown RBP13.09□□□□□ -0.31
HDAC8-214ENST00000439122 UTP11Q9Y3A2 253 aaKnown RBP13.09□□□□□ -0.31
HDAC8-214ENST00000439122 NR2E1Q9Y466 385 aa13.09□□□□□ -0.31
HDAC8-214ENST00000439122 ALG6Q9Y672 507 aa13.09□□□□□ -0.31
HDAC8-214ENST00000439122 CYP26A1O43174 497 aa13.08□□□□□ -0.31
HDAC8-214ENST00000439122 NR3C2P08235 984 aa13.08□□□□□ -0.31
HDAC8-214ENST00000439122 HSD17B3P37058 310 aa13.08□□□□□ -0.31
HDAC8-214ENST00000439122 ATP1A2P50993 1020 aa13.08□□□□□ -0.31
HDAC8-214ENST00000439122 GPC5P78333 572 aa13.08□□□□□ -0.31
HDAC8-214ENST00000439122 CEP85LQ5SZL2 805 aa13.08□□□□□ -0.31
HDAC8-214ENST00000439122 SNRNP48Q6IEG0 339 aaKnown RBP13.08□□□□□ -0.31
HDAC8-214ENST00000439122 OTUD6AQ7L8S5 288 aa13.08□□□□□ -0.31
HDAC8-214ENST00000439122 SLC47A2Q86VL8 602 aa13.08□□□□□ -0.31
HDAC8-214ENST00000439122 VSIG10LQ86VR7 867 aa13.08□□□□□ -0.31
HDAC8-214ENST00000439122 EPS8L1Q8TE68 723 aa13.08□□□□□ -0.31
HDAC8-214ENST00000439122 SEMA4DQ92854 862 aa13.08□□□□□ -0.31
HDAC8-214ENST00000439122 ZKSCAN4Q969J2 545 aaPredicted RBP13.08□□□□□ -0.31
HDAC8-214ENST00000439122 LRRC45Q96CN5 670 aa13.08□□□□□ -0.31
HDAC8-214ENST00000439122 NAP1L3Q99457 506 aaPredicted RBP13.08□□□□□ -0.31
HDAC8-214ENST00000439122 NEUROG2Q9H2A3 272 aa13.08□□□□□ -0.31
HDAC8-214ENST00000439122 RABEP2Q9H5N1 569 aa13.08□□□□□ -0.31
HDAC8-214ENST00000439122 LCMT1Q9UIC8 334 aa13.08□□□□□ -0.31
HDAC8-214ENST00000439122 GOLGA6L10A0A0M3HER8 536 aa13.08□□□□□ -0.32
HDAC8-214ENST00000439122 RTN2O75298 545 aa13.08□□□□□ -0.32
HDAC8-214ENST00000439122 COPB2P35606 906 aa13.08□□□□□ -0.32
HDAC8-214ENST00000439122 MFAP3P55082 362 aa13.08□□□□□ -0.32
HDAC8-214ENST00000439122 KRT39Q6A163 491 aa13.08□□□□□ -0.32
HDAC8-214ENST00000439122 SRLQ86TD4 932 aa13.08□□□□□ -0.32
HDAC8-214ENST00000439122 NOP9Q86U38 636 aaKnown RBP13.08□□□□□ -0.32
HDAC8-214ENST00000439122 MAP4K3Q8IVH8 894 aa13.08□□□□□ -0.32
HDAC8-214ENST00000439122 CD302Q8IX05 232 aa13.08□□□□□ -0.32
HDAC8-214ENST00000439122 FAM71AQ8IYT1 594 aa13.08□□□□□ -0.32
HDAC8-214ENST00000439122 BSNDQ8WZ55 320 aa13.08□□□□□ -0.32
HDAC8-214ENST00000439122 POMGNT1Q8WZA1 660 aa13.08□□□□□ -0.32
HDAC8-214ENST00000439122 ALG3Q92685 438 aa13.08□□□□□ -0.32
HDAC8-214ENST00000439122 KREMEN1Q96MU8 473 aa13.08□□□□□ -0.32
HDAC8-214ENST00000439122 PCDHB18PQ96TA0 734 aa13.08□□□□□ -0.32
HDAC8-214ENST00000439122 TRIM31Q9BZY9 425 aa13.08□□□□□ -0.32
HDAC8-214ENST00000439122 DPH5Q9H2P9 285 aa13.08□□□□□ -0.32
HDAC8-214ENST00000439122 CENPHQ9H3R5 247 aa13.08□□□□□ -0.32
HDAC8-214ENST00000439122 RRP15Q9Y3B9 282 aaKnown RBP13.08□□□□□ -0.32
HDAC8-214ENST00000439122 GJA3Q9Y6H8 435 aa13.08□□□□□ -0.32
HDAC8-214ENST00000439122 GOLGA6L10A6NI86 522 aa13.07□□□□□ -0.32
HDAC8-214ENST00000439122 EIF3HO15372 352 aaKnown RBP eCLIP13.07□□□□□ -0.32
HDAC8-214ENST00000439122 FDX1P10109 184 aa13.07□□□□□ -0.32
HDAC8-214ENST00000439122 ZNF280CQ8ND82 737 aa13.07□□□□□ -0.32
HDAC8-214ENST00000439122 RDM1Q8NG50 284 aa13.07□□□□□ -0.32
HDAC8-214ENST00000439122 PARD3BQ8TEW8 1205 aa13.07□□□□□ -0.32
HDAC8-214ENST00000439122 KIFAP3Q92845 792 aa13.07□□□□□ -0.32
HDAC8-214ENST00000439122 PICK1Q9NRD5 415 aa13.07□□□□□ -0.32
HDAC8-214ENST00000439122 PPP1R1BQ9UD71 204 aaPredicted RBP13.07□□□□□ -0.32
HDAC8-214ENST00000439122 FZD1Q9UP38 647 aa13.07□□□□□ -0.32
HDAC8-214ENST00000439122 PFASO15067 1338 aa13.07□□□□□ -0.32
HDAC8-214ENST00000439122 TULP2O00295 520 aa13.07□□□□□ -0.32
HDAC8-214ENST00000439122 PMM2O15305 246 aa13.07□□□□□ -0.32
HDAC8-214ENST00000439122 ATMINO43313 823 aaPredicted RBP13.07□□□□□ -0.32
HDAC8-214ENST00000439122 ZNF862O60290 1169 aa13.07□□□□□ -0.32
HDAC8-214ENST00000439122 SORBS3O60504 671 aa13.07□□□□□ -0.32
HDAC8-214ENST00000439122 MMEP08473 750 aa13.07□□□□□ -0.32
HDAC8-214ENST00000439122 DLATP10515 647 aaKnown RBP13.07□□□□□ -0.32
HDAC8-214ENST00000439122 CHRNB2P17787 502 aa13.07□□□□□ -0.32
HDAC8-214ENST00000439122 RPS12P25398 132 aaKnown RBP13.07□□□□□ -0.32
HDAC8-214ENST00000439122 CTNNA1P35221 906 aaKnown RBP13.07□□□□□ -0.32
HDAC8-214ENST00000439122 FLT3P36888 993 aa13.07□□□□□ -0.32
HDAC8-214ENST00000439122 GMPSP49915 693 aaPredicted RBP13.07□□□□□ -0.32
HDAC8-214ENST00000439122 HMGCS2P54868 508 aa13.07□□□□□ -0.32
HDAC8-214ENST00000439122 HADHBP55084 474 aaKnown RBP13.07□□□□□ -0.32
HDAC8-214ENST00000439122 PTENP60484 403 aa13.07□□□□□ -0.32
HDAC8-214ENST00000439122 MESDQ14696 234 aa13.07□□□□□ -0.32
HDAC8-214ENST00000439122 PRAMEF18Q5VWM3 479 aa13.07□□□□□ -0.32
HDAC8-214ENST00000439122 C11orf63Q6NUN7 778 aa13.07□□□□□ -0.32
HDAC8-214ENST00000439122 SWSAP1Q6NVH7 229 aa13.07□□□□□ -0.32
HDAC8-214ENST00000439122 XRRA1Q6P2D8 792 aa13.07□□□□□ -0.32
HDAC8-214ENST00000439122 UBL4BQ8N7F7 174 aa13.07□□□□□ -0.32
HDAC8-214ENST00000439122 BCAS4Q8TDM0 211 aa13.07□□□□□ -0.32
HDAC8-214ENST00000439122 UBLCP1Q8WVY7 318 aaPredicted RBP13.07□□□□□ -0.32
HDAC8-214ENST00000439122 ATP6V0A1Q93050 837 aa13.07□□□□□ -0.32
HDAC8-214ENST00000439122 ELMO3Q96BJ8 720 aa13.07□□□□□ -0.32
HDAC8-214ENST00000439122 GPRASP2Q96D09 838 aa13.07□□□□□ -0.32
HDAC8-214ENST00000439122 WRNIP1Q96S55 665 aa13.07□□□□□ -0.32
HDAC8-214ENST00000439122 TRIM51Q9BSJ1 452 aa13.07□□□□□ -0.32
HDAC8-214ENST00000439122 TMEM8AQ9HCN3 771 aa13.07□□□□□ -0.32
HDAC8-214ENST00000439122 TOPORSQ9NS56 1045 aaPredicted RBP13.07□□□□□ -0.32
HDAC8-214ENST00000439122 NOCTQ9UK39 431 aaKnown RBP13.07□□□□□ -0.32
HDAC8-214ENST00000439122 BHMG1C9JSJ3 638 aaPredicted RBP13.06□□□□□ -0.32
HDAC8-214ENST00000439122 HNRNPDLO14979 420 aaKnown RBP13.06□□□□□ -0.32
HDAC8-214ENST00000439122 SKOR1P84550 965 aa13.06□□□□□ -0.32
HDAC8-214ENST00000439122 DR1Q01658 176 aa13.06□□□□□ -0.32
HDAC8-214ENST00000439122 PDCLQ13371 301 aa13.06□□□□□ -0.32
HDAC8-214ENST00000439122 SF3B2Q13435 895 aaKnown RBP13.06□□□□□ -0.32
HDAC8-214ENST00000439122 UAP1Q16222 522 aaPredicted RBP13.06□□□□□ -0.32
HDAC8-214ENST00000439122 DCAF15Q66K64 600 aa13.06□□□□□ -0.32
HDAC8-214ENST00000439122 AADACL2Q6P093 401 aa13.06□□□□□ -0.32
HDAC8-214ENST00000439122 POTEAQ6S8J7 498 aa13.06□□□□□ -0.32
HDAC8-214ENST00000439122 SCYL3Q8IZE3 742 aa13.06□□□□□ -0.32
HDAC8-214ENST00000439122 OR2W6PQ8NHA6 318 aa13.06□□□□□ -0.32
HDAC8-214ENST00000439122 TAS1R2Q8TE23 839 aa13.06□□□□□ -0.32
HDAC8-214ENST00000439122 NSUN6Q8TEA1 469 aaKnown RBP13.06□□□□□ -0.32
HDAC8-214ENST00000439122 SLC16A10Q8TF71 515 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms