RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 MDGA1Q8NFP4 955 aa4.32□□□□□ -1.72
HMGB1P18-201ENST00000438801 SLC25A43Q8WUT9 341 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P18-201ENST00000438801 GCC1Q96CN9 775 aa4.32□□□□□ -1.72
HMGB1P18-201ENST00000438801 PGBD4Q96DM1 585 aa4.32□□□□□ -1.72
HMGB1P18-201ENST00000438801 SPO11Q9Y5K1 396 aa4.32□□□□□ -1.72
HMGB1P18-201ENST00000438801 C3P01024 1663 aa4.32□□□□□ -1.72
HMGB1P18-201ENST00000438801 ADGBQ8N7X0 1667 aa4.32□□□□□ -1.72
HMGB1P18-201ENST00000438801 AKNAQ7Z591 1439 aa4.31□□□□□ -1.72
HMGB1P18-201ENST00000438801 ATP10DQ9P241 1426 aa4.31□□□□□ -1.72
HMGB1P18-201ENST00000438801 TRAPPC8Q9Y2L5 1435 aa4.31□□□□□ -1.72
HMGB1P18-201ENST00000438801 A0A0A6YYJ9 748 aa4.31□□□□□ -1.72
HMGB1P18-201ENST00000438801 PPFIA2O75334 1257 aa4.31□□□□□ -1.72
HMGB1P18-201ENST00000438801 FSBPO95073 299 aa4.31□□□□□ -1.72
HMGB1P18-201ENST00000438801 APOL3O95236 402 aa4.31□□□□□ -1.72
HMGB1P18-201ENST00000438801 SDSP20132 328 aa4.31□□□□□ -1.72
HMGB1P18-201ENST00000438801 SQSTM1Q13501 440 aa4.31□□□□□ -1.72
HMGB1P18-201ENST00000438801 NFE2L2Q16236 605 aa4.31□□□□□ -1.72
HMGB1P18-201ENST00000438801 C1QL3Q5VWW1 255 aa4.31□□□□□ -1.72
HMGB1P18-201ENST00000438801 CREB3L3Q68CJ9 461 aa4.31□□□□□ -1.72
HMGB1P18-201ENST00000438801 KIAA1841Q6NSI8 718 aa4.31□□□□□ -1.72
HMGB1P18-201ENST00000438801 UNQ6494/PRO21346Q6UXR6 183 aa4.31□□□□□ -1.72
HMGB1P18-201ENST00000438801 DNAJC2Q99543 621 aaKnown RBP4.31□□□□□ -1.72
HMGB1P18-201ENST00000438801 MYL10Q9BUA6 226 aa4.31□□□□□ -1.72
HMGB1P18-201ENST00000438801 OSBPL6Q9BZF3 934 aa4.31□□□□□ -1.72
HMGB1P18-201ENST00000438801 MTG2Q9H4K7 406 aa4.31□□□□□ -1.72
HMGB1P18-201ENST00000438801 TRPS1Q9UHF7 1281 aa4.31□□□□□ -1.72
HMGB1P18-201ENST00000438801 SYNMO15061 1565 aa4.31□□□□□ -1.72
HMGB1P18-201ENST00000438801 A0A0A6YYK5 440 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P18-201ENST00000438801 MTSS1O43312 755 aa4.3□□□□□ -1.72
HMGB1P18-201ENST00000438801 OPHN1O60890 802 aa4.3□□□□□ -1.72
HMGB1P18-201ENST00000438801 STC2O76061 302 aa4.3□□□□□ -1.72
HMGB1P18-201ENST00000438801 GNAT2P19087 354 aa4.3□□□□□ -1.72
HMGB1P18-201ENST00000438801 TGM1P22735 817 aa4.3□□□□□ -1.72
HMGB1P18-201ENST00000438801 COL10A1Q03692 680 aa4.3□□□□□ -1.72
HMGB1P18-201ENST00000438801 MAN2A1Q16706 1144 aa4.3□□□□□ -1.72
HMGB1P18-201ENST00000438801 CFAP100Q494V2 611 aa4.3□□□□□ -1.72
HMGB1P18-201ENST00000438801 NAIF1Q69YI7 327 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P18-201ENST00000438801 ZZZ3Q8IYH5 903 aa4.3□□□□□ -1.72
HMGB1P18-201ENST00000438801 ZNF276Q8N554 614 aa4.3□□□□□ -1.72
HMGB1P18-201ENST00000438801 ST8SIA2Q92186 375 aa4.3□□□□□ -1.72
HMGB1P18-201ENST00000438801 RTF1Q92541 710 aaKnown RBP4.3□□□□□ -1.72
HMGB1P18-201ENST00000438801 HIST1H2AHQ96KK5 128 aa4.3□□□□□ -1.72
HMGB1P18-201ENST00000438801 UIMC1Q96RL1 719 aa4.3□□□□□ -1.72
HMGB1P18-201ENST00000438801 CRAMP1Q96RY5 1269 aa4.3□□□□□ -1.72
HMGB1P18-201ENST00000438801 HIST1H2AJQ99878 128 aa4.3□□□□□ -1.72
HMGB1P18-201ENST00000438801 NOL10Q9BSC4 688 aaKnown RBP4.3□□□□□ -1.72
HMGB1P18-201ENST00000438801 SOX7Q9BT81 388 aa4.3□□□□□ -1.72
HMGB1P18-201ENST00000438801 POFUT1Q9H488 388 aa4.3□□□□□ -1.72
HMGB1P18-201ENST00000438801 TOMM22Q9NS69 142 aa4.3□□□□□ -1.72
HMGB1P18-201ENST00000438801 OXSMQ9NWU1 459 aa4.3□□□□□ -1.72
HMGB1P18-201ENST00000438801 FRMPD1Q5SYB0 1578 aa4.3□□□□□ -1.72
HMGB1P18-201ENST00000438801 RAPGEF2Q9Y4G8 1499 aa4.3□□□□□ -1.72
HMGB1P18-201ENST00000438801 ABCA8O94911 1581 aa4.29□□□□□ -1.72
HMGB1P18-201ENST00000438801 GRXCR1A8MXD5 290 aa4.29□□□□□ -1.72
HMGB1P18-201ENST00000438801 PPP1R12AO14974 1030 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P18-201ENST00000438801 GAAP10253 952 aa4.29□□□□□ -1.72
HMGB1P18-201ENST00000438801 FSTL1Q12841 308 aa4.29□□□□□ -1.72
HMGB1P18-201ENST00000438801 BMS1Q14692 1282 aaKnown RBP4.29□□□□□ -1.72
HMGB1P18-201ENST00000438801 DCAF17Q5H9S7 520 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P18-201ENST00000438801 RHOUQ7L0Q8 258 aa4.29□□□□□ -1.72
HMGB1P18-201ENST00000438801 APBB1IPQ7Z5R6 666 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P18-201ENST00000438801 SYNE4Q8N205 404 aa4.29□□□□□ -1.72
HMGB1P18-201ENST00000438801 SH3TC2Q8TF17 1288 aa4.29□□□□□ -1.72
HMGB1P18-201ENST00000438801 LENG9Q96B70 501 aa4.29□□□□□ -1.72
HMGB1P18-201ENST00000438801 MRFAP1L1Q96HT8 127 aa4.29□□□□□ -1.72
HMGB1P18-201ENST00000438801 KANSL2Q9H9L4 492 aa4.29□□□□□ -1.72
HMGB1P18-201ENST00000438801 ING3Q9NXR8 418 aa4.29□□□□□ -1.72
HMGB1P18-201ENST00000438801 ZKSCAN5Q9Y2L8 839 aa4.29□□□□□ -1.72
HMGB1P18-201ENST00000438801 CHD8Q9HCK8 2581 aa4.28□□□□□ -1.72
HMGB1P18-201ENST00000438801 RFPL3O75679 317 aa4.28□□□□□ -1.72
HMGB1P18-201ENST00000438801 ATP2A2P16615 1042 aaKnown RBP4.28□□□□□ -1.72
HMGB1P18-201ENST00000438801 HK1P19367 917 aa4.28□□□□□ -1.72
HMGB1P18-201ENST00000438801 KRTAP1-1Q07627 177 aa4.28□□□□□ -1.72
HMGB1P18-201ENST00000438801 PABPC4Q13310 644 aaKnown RBP eCLIP4.28□□□□□ -1.72
HMGB1P18-201ENST00000438801 GPR162Q16538 588 aa4.28□□□□□ -1.72
HMGB1P18-201ENST00000438801 FAM214AQ32MH5 1076 aa4.28□□□□□ -1.72
HMGB1P18-201ENST00000438801 ORAI3Q9BRQ5 295 aa4.28□□□□□ -1.72
HMGB1P18-201ENST00000438801 ZMAT4Q9H898 229 aa4.28□□□□□ -1.72
HMGB1P18-201ENST00000438801 IFT57Q9NWB7 429 aa4.28□□□□□ -1.72
HMGB1P18-201ENST00000438801 H2AFY2Q9P0M6 372 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P18-201ENST00000438801 MAGEC2Q9UBF1 373 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P18-201ENST00000438801 FZD1Q9UP38 647 aa4.28□□□□□ -1.72
HMGB1P18-201ENST00000438801 SORCS3Q9UPU3 1222 aa4.28□□□□□ -1.72
HMGB1P18-201ENST00000438801 MYPNQ86TC9 1320 aa4.27□□□□□ -1.73
HMGB1P18-201ENST00000438801 POLR1AO95602 1720 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P18-201ENST00000438801 MED14O60244 1454 aa4.27□□□□□ -1.73
HMGB1P18-201ENST00000438801 RALGAPBQ86X10 1494 aa4.27□□□□□ -1.73
HMGB1P18-201ENST00000438801 ELL2O00472 640 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P18-201ENST00000438801 NRP1O14786 923 aa4.27□□□□□ -1.73
HMGB1P18-201ENST00000438801 HOXA3O43365 443 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P18-201ENST00000438801 GAS7O60861 476 aa4.27□□□□□ -1.73
HMGB1P18-201ENST00000438801 ALDH1A2O94788 518 aa4.27□□□□□ -1.73
HMGB1P18-201ENST00000438801 PCDH8O95206 1070 aa4.27□□□□□ -1.73
HMGB1P18-201ENST00000438801 ASMTLO95671 621 aa4.27□□□□□ -1.73
HMGB1P18-201ENST00000438801 GCP02774 474 aa4.27□□□□□ -1.73
HMGB1P18-201ENST00000438801 ITGB1P05556 798 aa4.27□□□□□ -1.73
HMGB1P18-201ENST00000438801 BMP5P22003 454 aa4.27□□□□□ -1.73
HMGB1P18-201ENST00000438801 NR4A1P22736 598 aa4.27□□□□□ -1.73
HMGB1P18-201ENST00000438801 CD40P25942 277 aa4.27□□□□□ -1.73
HMGB1P18-201ENST00000438801 LY6G5CQ5SRR4 150 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms