RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 LAG3P18627 525 aa5.61□□□□□ -1.51
PTPN4-205ENST00000433888 APOBEC3AP31941 199 aaPredicted RBP5.61□□□□□ -1.51
PTPN4-205ENST00000433888 ZEB1P37275 1124 aaPredicted RBP5.61□□□□□ -1.51
PTPN4-205ENST00000433888 GZMKP49863 264 aa5.61□□□□□ -1.51
PTPN4-205ENST00000433888 NEK4P51957 841 aa5.61□□□□□ -1.51
PTPN4-205ENST00000433888 C21orf62-AS1Q17RA5 79 aa5.61□□□□□ -1.51
PTPN4-205ENST00000433888 CCDC178Q5BJE1 867 aa5.61□□□□□ -1.51
PTPN4-205ENST00000433888 LRRTM3Q86VH5 581 aa5.61□□□□□ -1.51
PTPN4-205ENST00000433888 SYT12Q8IV01 421 aa5.61□□□□□ -1.51
PTPN4-205ENST00000433888 PASD1Q8IV76 773 aa5.61□□□□□ -1.51
PTPN4-205ENST00000433888 ZNF610Q8N9Z0 462 aa5.61□□□□□ -1.51
PTPN4-205ENST00000433888 BEND2Q8NDZ0 799 aa5.61□□□□□ -1.51
PTPN4-205ENST00000433888 RNPC3Q96LT9 517 aaKnown RBP5.61□□□□□ -1.51
PTPN4-205ENST00000433888 MS4A5Q9H3V2 200 aa5.61□□□□□ -1.51
PTPN4-205ENST00000433888 ZSWIM4Q9H7M6 989 aa5.61□□□□□ -1.51
PTPN4-205ENST00000433888 EIF2B4Q9UI10 523 aaKnown RBP5.61□□□□□ -1.51
PTPN4-205ENST00000433888 LEFTY2O00292 366 aa5.6□□□□□ -1.51
PTPN4-205ENST00000433888 B3GALT2O43825 422 aa5.6□□□□□ -1.51
PTPN4-205ENST00000433888 NUDT3O95989 172 aa5.6□□□□□ -1.51
PTPN4-205ENST00000433888 TAP1Q03518 808 aa5.6□□□□□ -1.51
PTPN4-205ENST00000433888 UBE3CQ15386 1083 aa5.6□□□□□ -1.51
PTPN4-205ENST00000433888 TERF2Q15554 542 aa5.6□□□□□ -1.51
PTPN4-205ENST00000433888 TCEA2Q15560 299 aa5.6□□□□□ -1.51
PTPN4-205ENST00000433888 TKFCQ3LXA3 575 aa5.6□□□□□ -1.51
PTPN4-205ENST00000433888 HECTD2Q5U5R9 776 aa5.6□□□□□ -1.51
PTPN4-205ENST00000433888 BTNL9Q6UXG8 535 aa5.6□□□□□ -1.51
PTPN4-205ENST00000433888 Q6YL49 198 aa5.6□□□□□ -1.51
PTPN4-205ENST00000433888 XYLT1Q86Y38 959 aa5.6□□□□□ -1.51
PTPN4-205ENST00000433888 ARHGEF19Q8IW93 802 aa5.6□□□□□ -1.51
PTPN4-205ENST00000433888 NINJ1Q92982 152 aa5.6□□□□□ -1.51
PTPN4-205ENST00000433888 DCLRE1CQ96SD1 692 aaKnown RBP5.6□□□□□ -1.51
PTPN4-205ENST00000433888 SPTLC3Q9NUV7 552 aa5.6□□□□□ -1.51
PTPN4-205ENST00000433888 SYBUQ9NX95 663 aa5.6□□□□□ -1.51
PTPN4-205ENST00000433888 ZSCAN20P17040 1043 aaPredicted RBP5.59□□□□□ -1.51
PTPN4-205ENST00000433888 KPNA1P52294 538 aaPredicted RBP5.59□□□□□ -1.51
PTPN4-205ENST00000433888 DUSP2Q05923 314 aa5.59□□□□□ -1.51
PTPN4-205ENST00000433888 MGAT5Q09328 741 aa5.59□□□□□ -1.51
PTPN4-205ENST00000433888 CCDC144BQ3MJ40 725 aa5.59□□□□□ -1.51
PTPN4-205ENST00000433888 OLFML1Q6UWY5 402 aa5.59□□□□□ -1.51
PTPN4-205ENST00000433888 GDF7Q7Z4P5 450 aa5.59□□□□□ -1.51
PTPN4-205ENST00000433888 FERMT2Q96AC1 680 aa5.59□□□□□ -1.51
PTPN4-205ENST00000433888 EPC1Q9H2F5 836 aa5.59□□□□□ -1.51
PTPN4-205ENST00000433888 SERHL2Q9H4I8 314 aa5.59□□□□□ -1.51
PTPN4-205ENST00000433888 PRDM12Q9H4Q4 367 aa5.59□□□□□ -1.51
PTPN4-205ENST00000433888 PIF1Q9H611 641 aa5.59□□□□□ -1.51
PTPN4-205ENST00000433888 EVLQ9UI08 416 aaPredicted RBP5.59□□□□□ -1.51
PTPN4-205ENST00000433888 PRSS50Q9UI38 385 aa5.59□□□□□ -1.51
PTPN4-205ENST00000433888 ZMYM3Q14202 1370 aa5.58□□□□□ -1.52
PTPN4-205ENST00000433888 ST20-MTHFSA0A0A6YYL1 179 aa5.58□□□□□ -1.52
PTPN4-205ENST00000433888 NRP2O60462 931 aa5.58□□□□□ -1.52
PTPN4-205ENST00000433888 LTA4HP09960 611 aaKnown RBP5.58□□□□□ -1.52
PTPN4-205ENST00000433888 LSP1P33241 339 aa5.58□□□□□ -1.52
PTPN4-205ENST00000433888 MANFP55145 182 aaKnown RBP5.58□□□□□ -1.52
PTPN4-205ENST00000433888 HNRNPA0Q13151 305 aaKnown RBP5.58□□□□□ -1.52
PTPN4-205ENST00000433888 SEPT7Q16181 437 aaKnown RBP5.58□□□□□ -1.52
PTPN4-205ENST00000433888 CCDC142Q17RM4 750 aa5.58□□□□□ -1.52
PTPN4-205ENST00000433888 C19orf54Q5BKX5 351 aa5.58□□□□□ -1.52
PTPN4-205ENST00000433888 METRNLQ641Q3 311 aa5.58□□□□□ -1.52
PTPN4-205ENST00000433888 CNNM4Q6P4Q7 775 aa5.58□□□□□ -1.52
PTPN4-205ENST00000433888 DRICH1Q6PGQ1 229 aaPredicted RBP5.58□□□□□ -1.52
PTPN4-205ENST00000433888 FAM193BQ96PV7 902 aaPredicted RBP5.58□□□□□ -1.52
PTPN4-205ENST00000433888 TEX101Q9BY14 249 aa5.58□□□□□ -1.52
PTPN4-205ENST00000433888 WDR11Q9BZH6 1224 aa5.58□□□□□ -1.52
PTPN4-205ENST00000433888 AKIP1Q9NQ31 210 aa5.58□□□□□ -1.52
PTPN4-205ENST00000433888 TRPM5Q9NZQ8 1165 aa5.58□□□□□ -1.52
PTPN4-205ENST00000433888 ANKFY1Q9P2R3 1169 aa5.58□□□□□ -1.52
PTPN4-205ENST00000433888 HDAC5Q9UQL6 1122 aa5.58□□□□□ -1.52
PTPN4-205ENST00000433888 PPP2R3BQ9Y5P8 575 aa5.58□□□□□ -1.52
PTPN4-205ENST00000433888 SETD1BQ9UPS6 1966 aaKnown RBP5.58□□□□□ -1.52
PTPN4-205ENST00000433888 GAGE12BA1L429 117 aa5.57□□□□□ -1.52
PTPN4-205ENST00000433888 GAGE12HA6NDE8 117 aa5.57□□□□□ -1.52
PTPN4-205ENST00000433888 RNASET2O00584 256 aaKnown RBP5.57□□□□□ -1.52
PTPN4-205ENST00000433888 NCR1O76036 304 aa5.57□□□□□ -1.52
PTPN4-205ENST00000433888 XPAP23025 273 aaPredicted RBP5.57□□□□□ -1.52
PTPN4-205ENST00000433888 BMPR1AP36894 532 aa5.57□□□□□ -1.52
PTPN4-205ENST00000433888 CLK3P49761 638 aaKnown RBP5.57□□□□□ -1.52
PTPN4-205ENST00000433888 APBA1Q02410 837 aa5.57□□□□□ -1.52
PTPN4-205ENST00000433888 TRIM25Q14258 630 aaKnown RBP5.57□□□□□ -1.52
PTPN4-205ENST00000433888 BEAN1Q3B7T3 259 aa5.57□□□□□ -1.52
PTPN4-205ENST00000433888 ANKS6Q68DC2 871 aa5.57□□□□□ -1.52
PTPN4-205ENST00000433888 RSAD2Q8WXG1 361 aa5.57□□□□□ -1.52
PTPN4-205ENST00000433888 ZNF764Q96H86 408 aaPredicted RBP5.57□□□□□ -1.52
PTPN4-205ENST00000433888 GPR101Q96P66 508 aaPredicted RBP5.57□□□□□ -1.52
PTPN4-205ENST00000433888 BBC3Q96PG8 261 aaPredicted RBP5.57□□□□□ -1.52
PTPN4-205ENST00000433888 ANO3Q9BYT9 981 aa5.57□□□□□ -1.52
PTPN4-205ENST00000433888 WNT8AQ9H1J5 351 aa5.57□□□□□ -1.52
PTPN4-205ENST00000433888 RIOX1Q9H6W3 641 aa5.57□□□□□ -1.52
PTPN4-205ENST00000433888 ZNHIT2Q9UHR6 403 aa5.57□□□□□ -1.52
PTPN4-205ENST00000433888 CLCA2Q9UQC9 943 aa5.57□□□□□ -1.52
PTPN4-205ENST00000433888 ZAR1LA6NP61 321 aa5.56□□□□□ -1.52
PTPN4-205ENST00000433888 PRR5-ARHGAP8B1AHC4 643 aa5.56□□□□□ -1.52
PTPN4-205ENST00000433888 TMEM127O75204 238 aa5.56□□□□□ -1.52
PTPN4-205ENST00000433888 ADCYAP1R1P41586 468 aa5.56□□□□□ -1.52
PTPN4-205ENST00000433888 LSSP48449 732 aa5.56□□□□□ -1.52
PTPN4-205ENST00000433888 NRG3P56975 720 aa5.56□□□□□ -1.52
PTPN4-205ENST00000433888 CCDC62Q6P9F0 684 aa5.56□□□□□ -1.52
PTPN4-205ENST00000433888 LMBR1LQ6UX01 489 aa5.56□□□□□ -1.52
PTPN4-205ENST00000433888 ABHD15Q6UXT9 468 aa5.56□□□□□ -1.52
PTPN4-205ENST00000433888 C16orf86Q6ZW13 317 aa5.56□□□□□ -1.52
PTPN4-205ENST00000433888 HOMER1Q86YM7 354 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms