RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 OSMP13725 252 aa5.03□□□□□ -1.6
HMGB3-203ENST00000430118 PNLIPP16233 465 aa5.03□□□□□ -1.6
HMGB3-203ENST00000430118 TM4SF4P48230 202 aa5.03□□□□□ -1.6
HMGB3-203ENST00000430118 KIF23Q02241 960 aaPredicted RBP5.03□□□□□ -1.6
HMGB3-203ENST00000430118 ZP2Q05996 745 aa5.03□□□□□ -1.6
HMGB3-203ENST00000430118 ADCY2Q08462 1091 aa5.03□□□□□ -1.6
HMGB3-203ENST00000430118 DBPQ10586 325 aaPredicted RBP5.03□□□□□ -1.6
HMGB3-203ENST00000430118 RAPGEF1Q13905 1077 aa5.03□□□□□ -1.6
HMGB3-203ENST00000430118 ZNF267Q14586 743 aaPredicted RBP5.03□□□□□ -1.6
HMGB3-203ENST00000430118 NR1I3Q14994 352 aa5.03□□□□□ -1.6
HMGB3-203ENST00000430118 PGS1Q32NB8 556 aa5.03□□□□□ -1.6
HMGB3-203ENST00000430118 ZBTB41Q5SVQ8 909 aa5.03□□□□□ -1.6
HMGB3-203ENST00000430118 C10orf62Q5T681 223 aaPredicted RBP5.03□□□□□ -1.6
HMGB3-203ENST00000430118 BICRALQ6AI39 1079 aa5.03□□□□□ -1.6
HMGB3-203ENST00000430118 OVCH2Q7RTZ1 564 aa5.03□□□□□ -1.6
HMGB3-203ENST00000430118 SLC41A1Q8IVJ1 513 aa5.03□□□□□ -1.6
HMGB3-203ENST00000430118 KIAA0319LQ8IZA0 1049 aa5.03□□□□□ -1.6
HMGB3-203ENST00000430118 KRT78Q8N1N4 520 aa5.03□□□□□ -1.6
HMGB3-203ENST00000430118 Q8N3U1 123 aa5.03□□□□□ -1.6
HMGB3-203ENST00000430118 ZBTB34Q8NCN2 500 aa5.03□□□□□ -1.6
HMGB3-203ENST00000430118 HIPK4Q8NE63 616 aa5.03□□□□□ -1.6
HMGB3-203ENST00000430118 PNISRQ8TF01 805 aaKnown RBP5.03□□□□□ -1.6
HMGB3-203ENST00000430118 ZNF526Q8TF50 670 aaPredicted RBP5.03□□□□□ -1.6
HMGB3-203ENST00000430118 CLEC4DQ8WXI8 215 aa5.03□□□□□ -1.6
HMGB3-203ENST00000430118 RPGRQ92834 1020 aaKnown RBP5.03□□□□□ -1.6
HMGB3-203ENST00000430118 FATE1Q969F0 183 aa5.03□□□□□ -1.6
HMGB3-203ENST00000430118 TSPAN17Q96FV3 270 aa5.03□□□□□ -1.6
HMGB3-203ENST00000430118 TUBGCP5Q96RT8 1024 aa5.03□□□□□ -1.6
HMGB3-203ENST00000430118 PITHD1Q9GZP4 211 aaPredicted RBP5.03□□□□□ -1.6
HMGB3-203ENST00000430118 ADAMTS10Q9H324 1103 aa5.03□□□□□ -1.6
HMGB3-203ENST00000430118 KCTD10Q9H3F6 313 aa5.03□□□□□ -1.6
HMGB3-203ENST00000430118 POFUT1Q9H488 388 aa5.03□□□□□ -1.6
HMGB3-203ENST00000430118 TNFRSF12AQ9NP84 129 aa5.03□□□□□ -1.6
HMGB3-203ENST00000430118 NGRNQ9NPE2 291 aaKnown RBP5.03□□□□□ -1.6
HMGB3-203ENST00000430118 STK32BQ9NY57 414 aa5.03□□□□□ -1.6
HMGB3-203ENST00000430118 BTBD7Q9P203 1132 aa5.03□□□□□ -1.6
HMGB3-203ENST00000430118 PUF60Q9UHX1 559 aaKnown RBP5.03□□□□□ -1.6
HMGB3-203ENST00000430118 TMPRSS11EQ9UL52 423 aa5.03□□□□□ -1.6
HMGB3-203ENST00000430118 PALD1Q9ULE6 856 aa5.03□□□□□ -1.6
HMGB3-203ENST00000430118 SLC5A6Q9Y289 635 aa5.03□□□□□ -1.6
HMGB3-203ENST00000430118 DHX57Q6P158 1386 aaKnown RBP5.03□□□□□ -1.6
HMGB3-203ENST00000430118 ATP7BP35670 1465 aa5.02□□□□□ -1.61
HMGB3-203ENST00000430118 LCHNA4D1U4 455 aa5.02□□□□□ -1.61
HMGB3-203ENST00000430118 NOTOA8MTQ0 251 aa5.02□□□□□ -1.61
HMGB3-203ENST00000430118 PLSCR1O15162 318 aa5.02□□□□□ -1.61
HMGB3-203ENST00000430118 SLC16A6O15403 523 aa5.02□□□□□ -1.61
HMGB3-203ENST00000430118 HPXP02790 462 aa5.02□□□□□ -1.61
HMGB3-203ENST00000430118 RPL17P18621 184 aaKnown RBP5.02□□□□□ -1.61
HMGB3-203ENST00000430118 TACR1P25103 407 aa5.02□□□□□ -1.61
HMGB3-203ENST00000430118 BTKQ06187 659 aa5.02□□□□□ -1.61
HMGB3-203ENST00000430118 MALLQ13021 153 aa5.02□□□□□ -1.61
HMGB3-203ENST00000430118 SEMA5AQ13591 1074 aa5.02□□□□□ -1.61
HMGB3-203ENST00000430118 DOC2BQ14184 412 aa5.02□□□□□ -1.61
HMGB3-203ENST00000430118 MYBPC3Q14896 1274 aa5.02□□□□□ -1.61
HMGB3-203ENST00000430118 TMEM95Q3KNT9 176 aa5.02□□□□□ -1.61
HMGB3-203ENST00000430118 UAP1L1Q3KQV9 507 aa5.02□□□□□ -1.61
HMGB3-203ENST00000430118 RALGPS1Q5JS13 557 aa5.02□□□□□ -1.61
HMGB3-203ENST00000430118 THEMIS2Q5TEJ8 643 aa5.02□□□□□ -1.61
HMGB3-203ENST00000430118 SLFN12LQ6IEE8 588 aa5.02□□□□□ -1.61
HMGB3-203ENST00000430118 DARS2Q6PI48 645 aaKnown RBP5.02□□□□□ -1.61
HMGB3-203ENST00000430118 KLHDC10Q6PID8 442 aa5.02□□□□□ -1.61
HMGB3-203ENST00000430118 SLC23A3Q6PIS1 610 aa5.02□□□□□ -1.61
HMGB3-203ENST00000430118 PAQR3Q6TCH7 311 aa5.02□□□□□ -1.61
HMGB3-203ENST00000430118 MILR1Q7Z6M3 343 aa5.02□□□□□ -1.61
HMGB3-203ENST00000430118 NLRX1Q86UT6 975 aa5.02□□□□□ -1.61
HMGB3-203ENST00000430118 SIRT2Q8IXJ6 389 aa5.02□□□□□ -1.61
HMGB3-203ENST00000430118 FAM186BQ8IYM0 893 aa5.02□□□□□ -1.61
HMGB3-203ENST00000430118 IFNL2Q8IZJ0 200 aa5.02□□□□□ -1.61
HMGB3-203ENST00000430118 MARCH10Q8NA82 808 aaPredicted RBP5.02□□□□□ -1.61
HMGB3-203ENST00000430118 BCL7CQ8WUZ0 217 aaPredicted RBP5.02□□□□□ -1.61
HMGB3-203ENST00000430118 ZC3H10Q96K80 434 aaKnown RBP5.02□□□□□ -1.61
HMGB3-203ENST00000430118 MYD88Q99836 296 aa5.02□□□□□ -1.61
HMGB3-203ENST00000430118 PLCD4Q9BRC7 762 aa5.02□□□□□ -1.61
HMGB3-203ENST00000430118 SYT17Q9BSW7 474 aa5.02□□□□□ -1.61
HMGB3-203ENST00000430118 MYL10Q9BUA6 226 aa5.02□□□□□ -1.61
HMGB3-203ENST00000430118 ACE2Q9BYF1 805 aaPredicted RBP5.02□□□□□ -1.61
HMGB3-203ENST00000430118 ANO3Q9BYT9 981 aa5.02□□□□□ -1.61
HMGB3-203ENST00000430118 SEMA4AQ9H3S1 761 aa5.02□□□□□ -1.61
HMGB3-203ENST00000430118 PLCB1Q9NQ66 1216 aa5.02□□□□□ -1.61
HMGB3-203ENST00000430118 DTLQ9NZJ0 730 aa5.02□□□□□ -1.61
HMGB3-203ENST00000430118 PRSS50Q9UI38 385 aa5.02□□□□□ -1.61
HMGB3-203ENST00000430118 CDY2AQ9Y6F7 541 aa5.02□□□□□ -1.61
HMGB3-203ENST00000430118 ABCC11Q96J66 1382 aa5.02□□□□□ -1.61
HMGB3-203ENST00000430118 PPLO60437 1756 aa5.01□□□□□ -1.61
HMGB3-203ENST00000430118 MYPNQ86TC9 1320 aa5.01□□□□□ -1.61
HMGB3-203ENST00000430118 SSH2Q76I76 1423 aa5.01□□□□□ -1.61
HMGB3-203ENST00000430118 KLRG2A4D1S0 409 aaPredicted RBP5.01□□□□□ -1.61
HMGB3-203ENST00000430118 GOLIM4O00461 696 aa5.01□□□□□ -1.61
HMGB3-203ENST00000430118 B3GALT2O43825 422 aa5.01□□□□□ -1.61
HMGB3-203ENST00000430118 NRP2O60462 931 aa5.01□□□□□ -1.61
HMGB3-203ENST00000430118 TCEA3O75764 348 aa5.01□□□□□ -1.61
HMGB3-203ENST00000430118 RPLP2P05387 115 aaKnown RBP5.01□□□□□ -1.61
HMGB3-203ENST00000430118 DBHP09172 617 aa5.01□□□□□ -1.61
HMGB3-203ENST00000430118 CLEC2LP0C7M8 214 aa5.01□□□□□ -1.61
HMGB3-203ENST00000430118 FUT4P22083 530 aa5.01□□□□□ -1.61
HMGB3-203ENST00000430118 PTGS1P23219 599 aa5.01□□□□□ -1.61
HMGB3-203ENST00000430118 POLD1P28340 1107 aa5.01□□□□□ -1.61
HMGB3-203ENST00000430118 AGFG1P52594 562 aaKnown RBP5.01□□□□□ -1.61
HMGB3-203ENST00000430118 TMEM62Q0P6H9 643 aa5.01□□□□□ -1.61
HMGB3-203ENST00000430118 IFIT5Q13325 482 aaKnown RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms