RNA–Protein interactions for RNA: ENST00000427183.6

HDLBP-214, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2 BASIC

Gene HDLBP, Length 6,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-214ENST00000427183 SSH2Q76I76 1423 aa13.3□□□□□ -0.28
HDLBP-214ENST00000427183 AKAP10O43572 662 aa13.3□□□□□ -0.28
HDLBP-214ENST00000427183 GUCY1A3Q02108 690 aa13.3□□□□□ -0.28
HDLBP-214ENST00000427183 NCAPHQ15003 741 aa13.3□□□□□ -0.28
HDLBP-214ENST00000427183 GPATCH4Q5T3I0 446 aaKnown RBP13.3□□□□□ -0.28
HDLBP-214ENST00000427183 ZNF555Q8NEP9 628 aa13.3□□□□□ -0.28
HDLBP-214ENST00000427183 PRMT1Q99873 361 aaKnown RBP13.3□□□□□ -0.28
HDLBP-214ENST00000427183 OSBPL10Q9BXB5 764 aa13.3□□□□□ -0.28
HDLBP-214ENST00000427183 BHMT2Q9H2M3 363 aa13.3□□□□□ -0.28
HDLBP-214ENST00000427183 USE1Q9NZ43 259 aa13.3□□□□□ -0.28
HDLBP-214ENST00000427183 MYO1DO94832 1006 aa13.3□□□□□ -0.28
HDLBP-214ENST00000427183 CD2BP2O95400 341 aaKnown RBP13.3□□□□□ -0.28
HDLBP-214ENST00000427183 SLC9A1P19634 815 aa13.3□□□□□ -0.28
HDLBP-214ENST00000427183 HIC1Q14526 733 aa13.3□□□□□ -0.28
HDLBP-214ENST00000427183 STXBP2Q15833 593 aa13.3□□□□□ -0.28
HDLBP-214ENST00000427183 ZNF667Q5HYK9 610 aa13.3□□□□□ -0.28
HDLBP-214ENST00000427183 ANKMY2Q8IV38 441 aa13.3□□□□□ -0.28
HDLBP-214ENST00000427183 CLEC4FQ8N1N0 589 aa13.3□□□□□ -0.28
HDLBP-214ENST00000427183 RBM41Q96IZ5 413 aaKnown RBP13.3□□□□□ -0.28
HDLBP-214ENST00000427183 PCDHGB4Q9UN71 923 aa13.3□□□□□ -0.28
HDLBP-214ENST00000427183 SYNGAP1Q96PV0 1343 aa13.3□□□□□ -0.28
HDLBP-214ENST00000427183 ATP9BO43861 1147 aa13.3□□□□□ -0.28
HDLBP-214ENST00000427183 MOCS2O96007 188 aaPredicted RBP13.3□□□□□ -0.28
HDLBP-214ENST00000427183 NAA30Q147X3 362 aaPredicted RBP13.3□□□□□ -0.28
HDLBP-214ENST00000427183 TMEM270Q6UE05 265 aa13.3□□□□□ -0.28
HDLBP-214ENST00000427183 DYNLL2Q96FJ2 89 aa13.3□□□□□ -0.28
HDLBP-214ENST00000427183 NLRP1Q9C000 1473 aa13.3□□□□□ -0.28
HDLBP-214ENST00000427183 CYP2D7A0A087X1C5 515 aa13.29□□□□□ -0.28
HDLBP-214ENST00000427183 TYK2P29597 1187 aa13.29□□□□□ -0.28
HDLBP-214ENST00000427183 GCLMP48507 274 aa13.29□□□□□ -0.28
HDLBP-214ENST00000427183 MIGA2Q7L4E1 593 aa13.29□□□□□ -0.28
HDLBP-214ENST00000427183 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.29□□□□□ -0.289e-7■□□□□ 8.6
HDLBP-214ENST00000427183 FAM96AQ9H5X1 160 aa13.29□□□□□ -0.28
HDLBP-214ENST00000427183 CPSF1Q10570 1443 aaKnown RBP13.29□□□□□ -0.28
HDLBP-214ENST00000427183 PSAPP07602 524 aa13.29□□□□□ -0.28
HDLBP-214ENST00000427183 FGFR4P22455 802 aa13.29□□□□□ -0.28
HDLBP-214ENST00000427183 DPY19L2Q6NUT2 758 aa13.29□□□□□ -0.28
HDLBP-214ENST00000427183 LONP2Q86WA8 852 aa13.29□□□□□ -0.28
HDLBP-214ENST00000427183 ASIC4Q96FT7 647 aa13.29□□□□□ -0.28
HDLBP-214ENST00000427183 NUP85Q9BW27 656 aa13.29□□□□□ -0.28
HDLBP-214ENST00000427183 LRRC53A6NM62 1247 aa13.29□□□□□ -0.28
HDLBP-214ENST00000427183 TCN1P20061 433 aaPredicted RBP13.29□□□□□ -0.28
HDLBP-214ENST00000427183 AFG1LQ8WV93 481 aa13.29□□□□□ -0.28
HDLBP-214ENST00000427183 C1orf54Q8WWF1 131 aa13.29□□□□□ -0.28
HDLBP-214ENST00000427183 OTUB1Q96FW1 271 aaPredicted RBP13.29□□□□□ -0.28
HDLBP-214ENST00000427183 RNPEPQ9H4A4 650 aa13.29□□□□□ -0.28
HDLBP-214ENST00000427183 PAIP2BQ9ULR5 123 aaKnown RBP13.29□□□□□ -0.28
HDLBP-214ENST00000427183 UBE4BO95155 1302 aa13.29□□□□□ -0.28
HDLBP-214ENST00000427183 GSNP06396 782 aa13.29□□□□□ -0.28
HDLBP-214ENST00000427183 IFNEQ86WN2 208 aa13.29□□□□□ -0.28
HDLBP-214ENST00000427183 ZNF668Q96K58 619 aaPredicted RBP13.29□□□□□ -0.28
HDLBP-214ENST00000427183 ASNSD1Q9NWL6 643 aa13.29□□□□□ -0.28
HDLBP-214ENST00000427183 SENP1Q9P0U3 644 aa13.29□□□□□ -0.28
HDLBP-214ENST00000427183 PRKAG2Q9UGJ0 569 aa13.29□□□□□ -0.28
HDLBP-214ENST00000427183 KRT87PA6NCN2 255 aa13.29□□□□□ -0.28
HDLBP-214ENST00000427183 SPDYE5A6NIY4 337 aa13.29□□□□□ -0.28
HDLBP-214ENST00000427183 ENO3P13929 434 aaPredicted RBP13.29□□□□□ -0.28
HDLBP-214ENST00000427183 CHRNA3P32297 505 aa13.29□□□□□ -0.28
HDLBP-214ENST00000427183 GPC5P78333 572 aa13.29□□□□□ -0.28
HDLBP-214ENST00000427183 PWP1Q13610 501 aa13.29□□□□□ -0.28
HDLBP-214ENST00000427183 SPDYE7PQ495Y7 208 aa13.29□□□□□ -0.28
HDLBP-214ENST00000427183 LRRC8BQ6P9F7 803 aa13.29□□□□□ -0.28
HDLBP-214ENST00000427183 SSH3Q8TE77 659 aa13.29□□□□□ -0.28
HDLBP-214ENST00000427183 TMEM245Q9H330 911 aa13.29□□□□□ -0.28
HDLBP-214ENST00000427183 ANTXR1Q9H6X2 564 aa13.29□□□□□ -0.28
HDLBP-214ENST00000427183 CLCA2Q9UQC9 943 aa13.29□□□□□ -0.28
HDLBP-214ENST00000427183 NFIBO00712 420 aa13.28□□□□□ -0.28
HDLBP-214ENST00000427183 SPDYAQ5MJ70 313 aa13.28□□□□□ -0.28
HDLBP-214ENST00000427183 FBXW10Q5XX13 1052 aa13.28□□□□□ -0.28
HDLBP-214ENST00000427183 YIPF2Q9BWQ6 316 aa13.28□□□□□ -0.28
HDLBP-214ENST00000427183 ADD3Q9UEY8 706 aaKnown RBP13.28□□□□□ -0.28
HDLBP-214ENST00000427183 ZNF804BA4D1E1 1349 aa13.28□□□□□ -0.28
HDLBP-214ENST00000427183 TCP11X1B4DZS4 312 aa13.28□□□□□ -0.28
HDLBP-214ENST00000427183 XPO1O14980 1071 aaKnown RBP13.28□□□□□ -0.28
HDLBP-214ENST00000427183 BMP3P12645 472 aa13.28□□□□□ -0.28
HDLBP-214ENST00000427183 OSBPP22059 807 aa13.28□□□□□ -0.28
HDLBP-214ENST00000427183 SLC10A5Q5PT55 438 aa13.28□□□□□ -0.28
HDLBP-214ENST00000427183 SYDE2Q5VT97 1194 aa13.28□□□□□ -0.28
HDLBP-214ENST00000427183 ZBTB38Q8NAP3 1195 aaPredicted RBP13.28□□□□□ -0.28
HDLBP-214ENST00000427183 GEMIN8Q9NWZ8 242 aaKnown RBP13.28□□□□□ -0.28
HDLBP-214ENST00000427183 V9GYQ6 96 aa13.28□□□□□ -0.28
HDLBP-214ENST00000427183 COL3A1P02461 1466 aaPredicted RBP13.28□□□□□ -0.28
HDLBP-214ENST00000427183 SHPRHQ149N8 1683 aa13.28□□□□□ -0.28
HDLBP-214ENST00000427183 CCDC78A2IDD5 438 aa13.28□□□□□ -0.28
HDLBP-214ENST00000427183 GYS1P13807 737 aa13.28□□□□□ -0.28
HDLBP-214ENST00000427183 BRD2P25440 801 aaKnown RBP13.28□□□□□ -0.28
HDLBP-214ENST00000427183 HEATR6Q6AI08 1181 aaKnown RBP13.28□□□□□ -0.28
HDLBP-214ENST00000427183 TMEM154Q6P9G4 183 aa13.28□□□□□ -0.28
HDLBP-214ENST00000427183 TTC23LQ6PF05 361 aa13.28□□□□□ -0.28
HDLBP-214ENST00000427183 ARHGEF25Q86VW2 580 aa13.28□□□□□ -0.28
HDLBP-214ENST00000427183 MAP4K1Q92918 833 aa13.28□□□□□ -0.28
HDLBP-214ENST00000427183 SRPRBQ9Y5M8 271 aaKnown RBP13.28□□□□□ -0.28
HDLBP-214ENST00000427183 ADGRB2O60241 1585 aa13.28□□□□□ -0.28
HDLBP-214ENST00000427183 LINC00854A0A1B0GVQ3 168 aa13.28□□□□□ -0.28
HDLBP-214ENST00000427183 E2F8A0AVK6 867 aa13.28□□□□□ -0.28
HDLBP-214ENST00000427183 NFKBIAP25963 317 aa13.28□□□□□ -0.28
HDLBP-214ENST00000427183 PSMD2Q13200 908 aa13.28□□□□□ -0.28
HDLBP-214ENST00000427183 KRT39Q6A163 491 aa13.28□□□□□ -0.28
HDLBP-214ENST00000427183 STAMBPL1Q96FJ0 436 aa13.28□□□□□ -0.28
HDLBP-214ENST00000427183 SPON2Q9BUD6 331 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms