RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 OAZ1P54368 228 aa11.55□□□□□ -0.56
CUX1-205ENST00000425244 SETQ01105 290 aaPredicted RBP11.55□□□□□ -0.56
CUX1-205ENST00000425244 MTMR1Q13613 665 aa11.55□□□□□ -0.56
CUX1-205ENST00000425244 EEPD1Q7L9B9 569 aa11.55□□□□□ -0.56
CUX1-205ENST00000425244 ADAT2Q7Z6V5 191 aaKnown RBP11.55□□□□□ -0.56
CUX1-205ENST00000425244 CTNNBL1Q8WYA6 563 aaPredicted RBP11.55□□□□□ -0.56
CUX1-205ENST00000425244 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.55□□□□□ -0.561e-6■■■□□ 15.3
CUX1-205ENST00000425244 MXRA8Q9BRK3 442 aa11.55□□□□□ -0.56
CUX1-205ENST00000425244 PDCD2LQ9BRP1 358 aa11.55□□□□□ -0.56
CUX1-205ENST00000425244 MOV10L1Q9BXT6 1211 aaKnown RBP11.55□□□□□ -0.56
CUX1-205ENST00000425244 RBPJLQ9UBG7 517 aa11.55□□□□□ -0.56
CUX1-205ENST00000425244 SEL1LQ9UBV2 794 aa11.55□□□□□ -0.56
CUX1-205ENST00000425244 ZNF233A6NK53 670 aa11.54□□□□□ -0.56
CUX1-205ENST00000425244 BTBD19C9JJ37 291 aa11.54□□□□□ -0.56
CUX1-205ENST00000425244 SART1O43290 800 aaKnown RBP11.54□□□□□ -0.56
CUX1-205ENST00000425244 BUB1BO60566 1050 aaPredicted RBP11.54□□□□□ -0.56
CUX1-205ENST00000425244 USP8P40818 1118 aa11.54□□□□□ -0.56
CUX1-205ENST00000425244 FSTL1Q12841 308 aa11.54□□□□□ -0.56
CUX1-205ENST00000425244 SLC35G2Q8TBE7 412 aa11.54□□□□□ -0.56
CUX1-205ENST00000425244 BRI3BPQ8WY22 251 aa11.54□□□□□ -0.56
CUX1-205ENST00000425244 MKNK1Q9BUB5 465 aa11.54□□□□□ -0.56
CUX1-205ENST00000425244 TAS2R14Q9NYV8 317 aa11.54□□□□□ -0.56
CUX1-205ENST00000425244 AMACRQ9UHK6 382 aa11.54□□□□□ -0.56
CUX1-205ENST00000425244 ODF2LQ9ULJ1 636 aa11.54□□□□□ -0.56
CUX1-205ENST00000425244 IGSF9BQ9UPX0 1349 aa11.54□□□□□ -0.56
CUX1-205ENST00000425244 TMEM150BA6NC51 233 aa11.54□□□□□ -0.56
CUX1-205ENST00000425244 NR3C2P08235 984 aa11.54□□□□□ -0.56
CUX1-205ENST00000425244 KRT13P13646 458 aa11.54□□□□□ -0.56
CUX1-205ENST00000425244 TNFAIP3P21580 790 aa11.54□□□□□ -0.56
CUX1-205ENST00000425244 ANXA13P27216 316 aa11.54□□□□□ -0.56
CUX1-205ENST00000425244 CCT5P48643 541 aa11.54□□□□□ -0.56
CUX1-205ENST00000425244 ZNF131P52739 623 aa11.54□□□□□ -0.56
CUX1-205ENST00000425244 DLG4P78352 724 aa11.54□□□□□ -0.56
CUX1-205ENST00000425244 BFSP1Q12934 665 aa11.54□□□□□ -0.56
CUX1-205ENST00000425244 PDCLQ13371 301 aa11.54□□□□□ -0.56
CUX1-205ENST00000425244 PALB2Q86YC2 1186 aa11.54□□□□□ -0.56
CUX1-205ENST00000425244 SYCE1Q8N0S2 351 aa11.54□□□□□ -0.56
CUX1-205ENST00000425244 DAW1Q8N136 415 aa11.54□□□□□ -0.56
CUX1-205ENST00000425244 KCTD17Q8N5Z5 321 aa11.54□□□□□ -0.56
CUX1-205ENST00000425244 ACTRT1Q8TDG2 376 aa11.54□□□□□ -0.56
CUX1-205ENST00000425244 WHAMMQ8TF30 809 aa11.54□□□□□ -0.56
CUX1-205ENST00000425244 MS4A4AQ96JQ5 239 aa11.54□□□□□ -0.56
CUX1-205ENST00000425244 APEX2Q9UBZ4 518 aa11.54□□□□□ -0.56
CUX1-205ENST00000425244 TMEM59LQ9UK28 342 aa11.54□□□□□ -0.56
CUX1-205ENST00000425244 AMFRQ9UKV5 643 aa11.54□□□□□ -0.56
CUX1-205ENST00000425244 NENFQ9UMX5 172 aa11.54□□□□□ -0.56
CUX1-205ENST00000425244 MYPNQ86TC9 1320 aa11.53□□□□□ -0.56
CUX1-205ENST00000425244 ZEB2O60315 1214 aa11.53□□□□□ -0.56
CUX1-205ENST00000425244 CETPP11597 493 aa11.53□□□□□ -0.56
CUX1-205ENST00000425244 GCLMP48507 274 aa11.53□□□□□ -0.56
CUX1-205ENST00000425244 GTF2A2P52657 109 aa11.53□□□□□ -0.56
CUX1-205ENST00000425244 TKFCQ3LXA3 575 aa11.53□□□□□ -0.56
CUX1-205ENST00000425244 CEP85LQ5SZL2 805 aa11.53□□□□□ -0.56
CUX1-205ENST00000425244 PCNX4Q63HM2 1172 aa11.53□□□□□ -0.56
CUX1-205ENST00000425244 NT5DC3Q86UY8 548 aa11.53□□□□□ -0.56
CUX1-205ENST00000425244 NSUN6Q8TEA1 469 aaKnown RBP11.53□□□□□ -0.56
CUX1-205ENST00000425244 SCFD2Q8WU76 684 aa11.53□□□□□ -0.56
CUX1-205ENST00000425244 TRIM31Q9BZY9 425 aa11.53□□□□□ -0.56
CUX1-205ENST00000425244 SUCLA2Q9P2R7 463 aaPredicted RBP11.53□□□□□ -0.56
CUX1-205ENST00000425244 FOXN3O00409 490 aaPredicted RBP11.53□□□□□ -0.56
CUX1-205ENST00000425244 CES2O00748 559 aa11.53□□□□□ -0.56
CUX1-205ENST00000425244 ATP2A1O14983 1001 aa11.53□□□□□ -0.56
CUX1-205ENST00000425244 SHOX2O60902 331 aaPredicted RBP11.53□□□□□ -0.56
CUX1-205ENST00000425244 ATP9AO75110 1047 aa11.53□□□□□ -0.56
CUX1-205ENST00000425244 FGGP02679 453 aa11.53□□□□□ -0.56
CUX1-205ENST00000425244 MAPK7Q13164 816 aa11.53□□□□□ -0.56
CUX1-205ENST00000425244 SPRYD7Q5W111 196 aa11.53□□□□□ -0.56
CUX1-205ENST00000425244 PHLDB3Q6NSJ2 640 aa11.53□□□□□ -0.56
CUX1-205ENST00000425244 IQCKQ8N0W5 287 aa11.53□□□□□ -0.56
CUX1-205ENST00000425244 BCAS4Q8TDM0 211 aa11.53□□□□□ -0.56
CUX1-205ENST00000425244 SLC20A1Q8WUM9 679 aa11.53□□□□□ -0.56
CUX1-205ENST00000425244 ARHGEF26Q96DR7 871 aa11.53□□□□□ -0.56
CUX1-205ENST00000425244 CBWD1Q9BRT8 395 aa11.53□□□□□ -0.56
CUX1-205ENST00000425244 CELF4Q9BZC1 486 aaKnown RBP11.53□□□□□ -0.56
CUX1-205ENST00000425244 GPR88Q9GZN0 384 aa11.53□□□□□ -0.56
CUX1-205ENST00000425244 THAP2Q9H0W7 228 aa11.53□□□□□ -0.56
CUX1-205ENST00000425244 UBE2TQ9NPD8 197 aaPredicted RBP11.53□□□□□ -0.56
CUX1-205ENST00000425244 DMAC2Q9NW81 257 aa11.53□□□□□ -0.56
CUX1-205ENST00000425244 PNMA2Q9UL42 364 aa11.53□□□□□ -0.56
CUX1-205ENST00000425244 PLAAQ9Y263 795 aa11.53□□□□□ -0.56
CUX1-205ENST00000425244 UBE4BO95155 1302 aa11.53□□□□□ -0.56
CUX1-205ENST00000425244 EMSYQ7Z589 1322 aa11.53□□□□□ -0.56
CUX1-205ENST00000425244 A0A0A6YYK5 440 aaPredicted RBP11.52□□□□□ -0.56
CUX1-205ENST00000425244 TMEM110-MUSTN1A8MSY1 372 aa11.52□□□□□ -0.56
CUX1-205ENST00000425244 CNMDO75829 334 aa11.52□□□□□ -0.56
CUX1-205ENST00000425244 GUCY2CP25092 1073 aa11.52□□□□□ -0.56
CUX1-205ENST00000425244 PPP2R5AQ15172 486 aa11.52□□□□□ -0.56
CUX1-205ENST00000425244 OR2W6PQ8NHA6 318 aa11.52□□□□□ -0.56
CUX1-205ENST00000425244 SLC30A5Q8TAD4 765 aa11.52□□□□□ -0.56
CUX1-205ENST00000425244 PIK3R5Q8WYR1 880 aa11.52□□□□□ -0.56
CUX1-205ENST00000425244 RFFLQ8WZ73 363 aa11.52□□□□□ -0.56
CUX1-205ENST00000425244 ISCUQ9H1K1 167 aa11.52□□□□□ -0.56
CUX1-205ENST00000425244 PORCNQ9H237 461 aa11.52□□□□□ -0.56
CUX1-205ENST00000425244 DPH5Q9H2P9 285 aa11.52□□□□□ -0.56
CUX1-205ENST00000425244 KCND2Q9NZV8 630 aa11.52□□□□□ -0.56
CUX1-205ENST00000425244 TCEAL9Q9UHQ7 104 aa11.52□□□□□ -0.56
CUX1-205ENST00000425244 INTUQ9ULD6 942 aa11.52□□□□□ -0.56
CUX1-205ENST00000425244 ABT1Q9ULW3 272 aaKnown RBP11.52□□□□□ -0.56
CUX1-205ENST00000425244 RPTORQ8N122 1335 aa11.52□□□□□ -0.57
CUX1-205ENST00000425244 EIF3HO15372 352 aaKnown RBP eCLIP11.52□□□□□ -0.571e-7■■■□□ 16.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms