RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 JAZF1Q86VZ6 243 aa3.36□□□□□ -1.87
PMS1-209ENST00000424059 NDUFAF2Q8N183 169 aa3.36□□□□□ -1.87
PMS1-209ENST00000424059 HIPK4Q8NE63 616 aa3.36□□□□□ -1.87
PMS1-209ENST00000424059 PMFBP1Q8TBY8 1022 aa3.36□□□□□ -1.87
PMS1-209ENST00000424059 GIMAP1Q8WWP7 306 aa3.36□□□□□ -1.87
PMS1-209ENST00000424059 SLC7A6OSQ96CW6 309 aaPredicted RBP3.36□□□□□ -1.87
PMS1-209ENST00000424059 GBP4Q96PP9 640 aa3.36□□□□□ -1.87
PMS1-209ENST00000424059 PLEKHG4BQ96PX9 1271 aa3.36□□□□□ -1.87
PMS1-209ENST00000424059 ZHX3Q9H4I2 956 aa3.36□□□□□ -1.87
PMS1-209ENST00000424059 TCEAL9Q9UHQ7 104 aa3.36□□□□□ -1.87
PMS1-209ENST00000424059 TMCC3Q9ULS5 477 aa3.36□□□□□ -1.87
PMS1-209ENST00000424059 PCDHA9Q9Y5H5 950 aa3.36□□□□□ -1.87
PMS1-209ENST00000424059 DDX49Q9Y6V7 483 aaKnown RBP3.36□□□□□ -1.87
PMS1-209ENST00000424059 CAPN14A8MX76 684 aa3.35□□□□□ -1.87
PMS1-209ENST00000424059 KCNQ2O43526 872 aa3.35□□□□□ -1.87
PMS1-209ENST00000424059 BBOX1O75936 387 aa3.35□□□□□ -1.87
PMS1-209ENST00000424059 LDHAP00338 332 aaKnown RBP3.35□□□□□ -1.87
PMS1-209ENST00000424059 CCDC175P0C221 793 aa3.35□□□□□ -1.87
PMS1-209ENST00000424059 FAM153BP0C7A2 387 aa3.35□□□□□ -1.87
PMS1-209ENST00000424059 ENPP1P22413 925 aa3.35□□□□□ -1.87
PMS1-209ENST00000424059 STIP1P31948 543 aaKnown RBP3.35□□□□□ -1.87
PMS1-209ENST00000424059 ALDH6A1Q02252 535 aaKnown RBP3.35□□□□□ -1.87
PMS1-209ENST00000424059 ARHGAP44Q17R89 818 aa3.35□□□□□ -1.87
PMS1-209ENST00000424059 DNAJC21Q5F1R6 531 aaKnown RBP3.35□□□□□ -1.87
PMS1-209ENST00000424059 PDXDC1Q6P996 788 aa3.35□□□□□ -1.87
PMS1-209ENST00000424059 CTR9Q6PD62 1173 aa3.35□□□□□ -1.87
PMS1-209ENST00000424059 LRSAM1Q6UWE0 723 aa3.35□□□□□ -1.87
PMS1-209ENST00000424059 ARHGEF25Q86VW2 580 aa3.35□□□□□ -1.87
PMS1-209ENST00000424059 CLASRPQ8N2M8 674 aaKnown RBP3.35□□□□□ -1.87
PMS1-209ENST00000424059 NEK9Q8TD19 979 aa3.35□□□□□ -1.87
PMS1-209ENST00000424059 TEKT1Q969V4 418 aa3.35□□□□□ -1.87
PMS1-209ENST00000424059 MAGEB10Q96LZ2 347 aaPredicted RBP3.35□□□□□ -1.87
PMS1-209ENST00000424059 MMTAG2Q9BU76 263 aaKnown RBP3.35□□□□□ -1.87
PMS1-209ENST00000424059 SLC6A15Q9H2J7 730 aa3.35□□□□□ -1.87
PMS1-209ENST00000424059 RWDD1Q9H446 243 aaPredicted RBP3.35□□□□□ -1.87
PMS1-209ENST00000424059 RMI1Q9H9A7 625 aa3.35□□□□□ -1.87
PMS1-209ENST00000424059 DDX56Q9NY93 547 aaKnown RBP3.35□□□□□ -1.87
PMS1-209ENST00000424059 PFDN2Q9UHV9 154 aa3.35□□□□□ -1.87
PMS1-209ENST00000424059 RAD50Q92878 1312 aa3.34□□□□□ -1.87
PMS1-209ENST00000424059 A0A087X1B8 175 aa3.34□□□□□ -1.87
PMS1-209ENST00000424059 PABPN1LA6NDY0 278 aaKnown RBP3.34□□□□□ -1.87
PMS1-209ENST00000424059 GOLGA6L22H0YM25 854 aa3.34□□□□□ -1.87
PMS1-209ENST00000424059 BOLA2-SMG1P6H3BVE0 249 aa3.34□□□□□ -1.87
PMS1-209ENST00000424059 SCDO00767 359 aa3.34□□□□□ -1.87
PMS1-209ENST00000424059 CCP110O43303 1012 aa3.34□□□□□ -1.87
PMS1-209ENST00000424059 S100BP04271 92 aaPredicted RBP3.34□□□□□ -1.87
PMS1-209ENST00000424059 SETSIPP0DME0 302 aa3.34□□□□□ -1.87
PMS1-209ENST00000424059 RPL17P18621 184 aaKnown RBP3.34□□□□□ -1.87
PMS1-209ENST00000424059 ALDH1B1P30837 517 aa3.34□□□□□ -1.87
PMS1-209ENST00000424059 KCNJ4P48050 445 aa3.34□□□□□ -1.87
PMS1-209ENST00000424059 DGCR2P98153 550 aa3.34□□□□□ -1.87
PMS1-209ENST00000424059 RIN1Q13671 783 aa3.34□□□□□ -1.87
PMS1-209ENST00000424059 ZSCAN26Q16670 478 aa3.34□□□□□ -1.87
PMS1-209ENST00000424059 GAGE13Q4V321 117 aa3.34□□□□□ -1.87
PMS1-209ENST00000424059 CCDC93Q567U6 631 aa3.34□□□□□ -1.87
PMS1-209ENST00000424059 OVCH1Q7RTY7 1134 aa3.34□□□□□ -1.87
PMS1-209ENST00000424059 MORC1Q86VD1 984 aa3.34□□□□□ -1.87
PMS1-209ENST00000424059 CHCHD4Q8N4Q1 142 aa3.34□□□□□ -1.87
PMS1-209ENST00000424059 CISD2Q8N5K1 135 aaKnown RBP3.34□□□□□ -1.87
PMS1-209ENST00000424059 ZSWIM2Q8NEG5 633 aa3.34□□□□□ -1.87
PMS1-209ENST00000424059 OR14K1Q8NGZ2 314 aa3.34□□□□□ -1.87
PMS1-209ENST00000424059 TDRD7Q8NHU6 1098 aaKnown RBP3.34□□□□□ -1.87
PMS1-209ENST00000424059 NEU4Q8WWR8 484 aaPredicted RBP3.34□□□□□ -1.87
PMS1-209ENST00000424059 CDHR1Q96JP9 859 aa3.34□□□□□ -1.87
PMS1-209ENST00000424059 UCKL1Q9NWZ5 548 aa3.34□□□□□ -1.87
PMS1-209ENST00000424059 MKS1Q9NXB0 559 aa3.34□□□□□ -1.87
PMS1-209ENST00000424059 CEP72Q9P209 647 aa3.34□□□□□ -1.87
PMS1-209ENST00000424059 SAE1Q9UBE0 346 aaPredicted RBP3.34□□□□□ -1.87
PMS1-209ENST00000424059 NDOR1Q9UHB4 597 aa3.34□□□□□ -1.87
PMS1-209ENST00000424059 IP6K2Q9UHH9 426 aa3.34□□□□□ -1.87
PMS1-209ENST00000424059 CDC42EP3Q9UKI2 254 aa3.34□□□□□ -1.87
PMS1-209ENST00000424059 MAFFQ9ULX9 164 aa3.34□□□□□ -1.87
PMS1-209ENST00000424059 LZTS1Q9Y250 596 aa3.34□□□□□ -1.87
PMS1-209ENST00000424059 KDM2BQ8NHM5 1336 aa3.34□□□□□ -1.88
PMS1-209ENST00000424059 DYTNA2CJ06 578 aa3.34□□□□□ -1.88
PMS1-209ENST00000424059 PRAMEF22A3QJZ6 481 aa3.34□□□□□ -1.88
PMS1-209ENST00000424059 TMEM110-MUSTN1A8MSY1 372 aa3.34□□□□□ -1.88
PMS1-209ENST00000424059 IFRD1O00458 451 aaPredicted RBP3.34□□□□□ -1.88
PMS1-209ENST00000424059 TRAF5O00463 557 aa3.34□□□□□ -1.88
PMS1-209ENST00000424059 DIAPH1O60610 1272 aaKnown RBP3.34□□□□□ -1.88
PMS1-209ENST00000424059 RNASEH2AO75792 299 aaKnown RBP3.34□□□□□ -1.88
PMS1-209ENST00000424059 XBP1P17861 261 aa3.34□□□□□ -1.88
PMS1-209ENST00000424059 ATP2B1P20020 1258 aa3.34□□□□□ -1.88
PMS1-209ENST00000424059 TSPAN7P41732 249 aa3.34□□□□□ -1.88
PMS1-209ENST00000424059 GTF2A1P52655 376 aaPredicted RBP3.34□□□□□ -1.88
PMS1-209ENST00000424059 RIPK4P57078 832 aa3.34□□□□□ -1.88
PMS1-209ENST00000424059 SERINC3Q13530 473 aa3.34□□□□□ -1.88
PMS1-209ENST00000424059 SEC23AQ15436 765 aa3.34□□□□□ -1.88
PMS1-209ENST00000424059 KCNV1Q6PIU1 500 aa3.34□□□□□ -1.88
PMS1-209ENST00000424059 OTOP1Q7RTM1 612 aa3.34□□□□□ -1.88
PMS1-209ENST00000424059 MRGPRGQ86SM5 289 aa3.34□□□□□ -1.88
PMS1-209ENST00000424059 LCA5Q86VQ0 697 aa3.34□□□□□ -1.88
PMS1-209ENST00000424059 LDLRAD3Q86YD5 345 aa3.34□□□□□ -1.88
PMS1-209ENST00000424059 C17orf50Q8WW18 174 aa3.34□□□□□ -1.88
PMS1-209ENST00000424059 JDP2Q8WYK2 163 aa3.34□□□□□ -1.88
PMS1-209ENST00000424059 CENPTQ96BT3 561 aa3.34□□□□□ -1.88
PMS1-209ENST00000424059 MIEF2Q96C03 454 aa3.34□□□□□ -1.88
PMS1-209ENST00000424059 ERP27Q96DN0 273 aa3.34□□□□□ -1.88
PMS1-209ENST00000424059 TTC14Q96N46 770 aa3.34□□□□□ -1.88
PMS1-209ENST00000424059 NOL10Q9BSC4 688 aaKnown RBP3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms