RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 SLC27A1Q6PCB7 646 aa19.71■□□□□ 0.75
SBDSP1-202ENST00000423945 EP400NLQ6ZTU2 488 aa19.71■□□□□ 0.75
SBDSP1-202ENST00000423945 RBM23Q86U06 439 aaKnown RBP19.71■□□□□ 0.75
SBDSP1-202ENST00000423945 ZBTB8OSQ8IWT0 167 aa19.71■□□□□ 0.75
SBDSP1-202ENST00000423945 KIFAP3Q92845 792 aa19.71■□□□□ 0.75
SBDSP1-202ENST00000423945 VN1R3Q9BXE9 311 aa19.71■□□□□ 0.75
SBDSP1-202ENST00000423945 C2orf40Q9H1Z8 148 aa19.71■□□□□ 0.75
SBDSP1-202ENST00000423945 PDZD7Q9H5P4 517 aa19.71■□□□□ 0.75
SBDSP1-202ENST00000423945 HIDE1A8MVS5 230 aa19.7■□□□□ 0.74
SBDSP1-202ENST00000423945 PER2O15055 1255 aa19.7■□□□□ 0.74
SBDSP1-202ENST00000423945 POMCP01189 267 aa19.7■□□□□ 0.74
SBDSP1-202ENST00000423945 PRKCBP05771 671 aa19.7■□□□□ 0.74
SBDSP1-202ENST00000423945 RBM10P98175 930 aaKnown RBP19.7■□□□□ 0.74
SBDSP1-202ENST00000423945 NCBP1Q09161 790 aaKnown RBP19.7■□□□□ 0.74
SBDSP1-202ENST00000423945 PLPP4Q5VZY2 271 aa19.7■□□□□ 0.74
SBDSP1-202ENST00000423945 EEF1DP3Q658K8 133 aa19.7■□□□□ 0.74
SBDSP1-202ENST00000423945 CABP7Q86V35 215 aa19.7■□□□□ 0.74
SBDSP1-202ENST00000423945 EFHBQ8N7U6 833 aa19.7■□□□□ 0.74
SBDSP1-202ENST00000423945 GSTCDQ8NEC7 633 aa19.7■□□□□ 0.74
SBDSP1-202ENST00000423945 VN1R2Q8NFZ6 395 aa19.7■□□□□ 0.74
SBDSP1-202ENST00000423945 DEPTORQ8TB45 409 aa19.7■□□□□ 0.74
SBDSP1-202ENST00000423945 MICAL1Q8TDZ2 1067 aa19.7■□□□□ 0.74
SBDSP1-202ENST00000423945 ZFP42Q96MM3 310 aa19.7■□□□□ 0.74
SBDSP1-202ENST00000423945 GAD1Q99259 594 aa19.7■□□□□ 0.74
SBDSP1-202ENST00000423945 TCF25Q9BQ70 676 aa19.7■□□□□ 0.74
SBDSP1-202ENST00000423945 APOL6Q9BWW8 343 aa19.7■□□□□ 0.74
SBDSP1-202ENST00000423945 GBP3Q9H0R5 595 aa19.7■□□□□ 0.74
SBDSP1-202ENST00000423945 CLEC1BQ9P126 229 aa19.7■□□□□ 0.74
SBDSP1-202ENST00000423945 GRXCR2A6NFK2 248 aa19.69■□□□□ 0.74
SBDSP1-202ENST00000423945 ARL5CA6NH57 179 aa19.69■□□□□ 0.74
SBDSP1-202ENST00000423945 ACKR2O00590 384 aa19.69■□□□□ 0.74
SBDSP1-202ENST00000423945 AKAP5P24588 427 aa19.69■□□□□ 0.74
SBDSP1-202ENST00000423945 MLH1P40692 756 aa19.69■□□□□ 0.74
SBDSP1-202ENST00000423945 ALDH7A1P49419 539 aaKnown RBP19.69■□□□□ 0.74
SBDSP1-202ENST00000423945 SLC12A3P55017 1021 aa19.69■□□□□ 0.74
SBDSP1-202ENST00000423945 PPP2R5AQ15172 486 aa19.69■□□□□ 0.74
SBDSP1-202ENST00000423945 DUSP6Q16828 381 aa19.69■□□□□ 0.74
SBDSP1-202ENST00000423945 NT5DC1Q5TFE4 455 aa19.69■□□□□ 0.74
SBDSP1-202ENST00000423945 PTCRAQ6ISU1 281 aaPredicted RBP19.69■□□□□ 0.74
SBDSP1-202ENST00000423945 PDE12Q6L8Q7 609 aaKnown RBP19.69■□□□□ 0.74
SBDSP1-202ENST00000423945 TAS1R3Q7RTX0 852 aa19.69■□□□□ 0.74
SBDSP1-202ENST00000423945 SYT2Q8N9I0 419 aaPredicted RBP19.69■□□□□ 0.74
SBDSP1-202ENST00000423945 URGCPQ8TCY9 931 aa19.69■□□□□ 0.74
SBDSP1-202ENST00000423945 IGSF21Q96ID5 467 aa19.69■□□□□ 0.74
SBDSP1-202ENST00000423945 MSLNLQ96KJ4 702 aa19.69■□□□□ 0.74
SBDSP1-202ENST00000423945 IFT74Q96LB3 600 aa19.69■□□□□ 0.74
SBDSP1-202ENST00000423945 AK8Q96MA6 479 aa19.69■□□□□ 0.74
SBDSP1-202ENST00000423945 NT5C3AQ9H0P0 336 aa19.69■□□□□ 0.74
SBDSP1-202ENST00000423945 PUF60Q9UHX1 559 aaKnown RBP19.69■□□□□ 0.74
SBDSP1-202ENST00000423945 SFI1A8K8P3 1242 aa19.68■□□□□ 0.74
SBDSP1-202ENST00000423945 TNFRSF10AO00220 468 aa19.68■□□□□ 0.74
SBDSP1-202ENST00000423945 BMP15O95972 392 aa19.68■□□□□ 0.74
SBDSP1-202ENST00000423945 LIG1P18858 919 aa19.68■□□□□ 0.74
SBDSP1-202ENST00000423945 GUCY2CP25092 1073 aa19.68■□□□□ 0.74
SBDSP1-202ENST00000423945 NPTX2P47972 431 aa19.68■□□□□ 0.74
SBDSP1-202ENST00000423945 SCNN1GP51170 649 aa19.68■□□□□ 0.74
SBDSP1-202ENST00000423945 PEX3P56589 373 aa19.68■□□□□ 0.74
SBDSP1-202ENST00000423945 KRT17Q04695 432 aa19.68■□□□□ 0.74
SBDSP1-202ENST00000423945 RNASELQ05823 741 aaKnown RBP19.68■□□□□ 0.74
SBDSP1-202ENST00000423945 PRPF4BQ13523 1007 aaKnown RBP19.68■□□□□ 0.74
SBDSP1-202ENST00000423945 KCNC3Q14003 757 aa19.68■□□□□ 0.74
SBDSP1-202ENST00000423945 CLUL1Q15846 466 aa19.68■□□□□ 0.74
SBDSP1-202ENST00000423945 MAPK6Q16659 721 aa19.68■□□□□ 0.74
SBDSP1-202ENST00000423945 COLGALT2Q8IYK4 626 aa19.68■□□□□ 0.74
SBDSP1-202ENST00000423945 KCTD17Q8N5Z5 321 aa19.68■□□□□ 0.74
SBDSP1-202ENST00000423945 PPP2R3CQ969Q6 453 aa19.68■□□□□ 0.74
SBDSP1-202ENST00000423945 TMEM169Q96HH4 297 aa19.68■□□□□ 0.74
SBDSP1-202ENST00000423945 TRIM6Q9C030 488 aaPredicted RBP19.68■□□□□ 0.74
SBDSP1-202ENST00000423945 CXCL16Q9H2A7 254 aa19.68■□□□□ 0.74
SBDSP1-202ENST00000423945 TLE6Q9H808 572 aa19.68■□□□□ 0.74
SBDSP1-202ENST00000423945 CD320Q9NPF0 282 aa19.68■□□□□ 0.74
SBDSP1-202ENST00000423945 UBN1Q9NPG3 1134 aa19.68■□□□□ 0.74
SBDSP1-202ENST00000423945 BLOC1S4Q9NUP1 217 aa19.68■□□□□ 0.74
SBDSP1-202ENST00000423945 ARHGAP28Q9P2N2 729 aa19.68■□□□□ 0.74
SBDSP1-202ENST00000423945 TRIP11Q15643 1979 aa19.67■□□□□ 0.74
SBDSP1-202ENST00000423945 STX6O43752 255 aa19.67■□□□□ 0.74
SBDSP1-202ENST00000423945 PLA2G4BP0C869 781 aa19.67■□□□□ 0.74
SBDSP1-202ENST00000423945 LONP1P36776 959 aaKnown RBP19.67■□□□□ 0.74
SBDSP1-202ENST00000423945 DSC1Q08554 894 aa19.67■□□□□ 0.74
SBDSP1-202ENST00000423945 RAD51AP2Q09MP3 1159 aa19.67■□□□□ 0.74
SBDSP1-202ENST00000423945 ARSHQ5FYA8 562 aa19.67■□□□□ 0.74
SBDSP1-202ENST00000423945 USP49Q70CQ1 688 aa19.67■□□□□ 0.74
SBDSP1-202ENST00000423945 TMC7Q7Z402 723 aa19.67■□□□□ 0.74
SBDSP1-202ENST00000423945 ZBP1Q9H171 429 aa19.67■□□□□ 0.74
SBDSP1-202ENST00000423945 ENTPD7Q9NQZ7 604 aa19.67■□□□□ 0.74
SBDSP1-202ENST00000423945 MARCH5Q9NX47 278 aa19.67■□□□□ 0.74
SBDSP1-202ENST00000423945 KANSL3Q9P2N6 904 aa19.67■□□□□ 0.74
SBDSP1-202ENST00000423945 FBXO2Q9UK22 296 aaPredicted RBP19.67■□□□□ 0.74
SBDSP1-202ENST00000423945 BARX2Q9UMQ3 279 aaPredicted RBP19.67■□□□□ 0.74
SBDSP1-202ENST00000423945 GIT1Q9Y2X7 761 aa19.67■□□□□ 0.74
SBDSP1-202ENST00000423945 NPHP3-ACAD11A0A0J9YXS1 232 aa19.66■□□□□ 0.74
SBDSP1-202ENST00000423945 C2orf71A6NGG8 1288 aa19.66■□□□□ 0.74
SBDSP1-202ENST00000423945 NRP1O14786 923 aa19.66■□□□□ 0.74
SBDSP1-202ENST00000423945 N4BP3O15049 544 aa19.66■□□□□ 0.74
SBDSP1-202ENST00000423945 SLC26A4O43511 780 aa19.66■□□□□ 0.74
SBDSP1-202ENST00000423945 MARCKSP29966 332 aaPredicted RBP19.66■□□□□ 0.74
SBDSP1-202ENST00000423945 EFNA5P52803 228 aa19.66■□□□□ 0.74
SBDSP1-202ENST00000423945 KARSQ15046 597 aaKnown RBP19.66■□□□□ 0.74
SBDSP1-202ENST00000423945 DDX53Q86TM3 631 aaKnown RBP19.66■□□□□ 0.74
SBDSP1-202ENST00000423945 FAM178BQ8IXR5 827 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms