RNA–Protein interactions for RNA: ENST00000422029.6

NDUFA3-208, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3

Gene NDUFA3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-208ENST00000422029 ALDH2P05091 517 aa12.62□□□□□ -0.39
NDUFA3-208ENST00000422029 CNPP09543 421 aaKnown RBP12.62□□□□□ -0.39
NDUFA3-208ENST00000422029 HOXB8P17481 243 aaPredicted RBP12.62□□□□□ -0.39
NDUFA3-208ENST00000422029 GLRA2P23416 452 aa12.62□□□□□ -0.39
NDUFA3-208ENST00000422029 RAB27AP51159 221 aa12.62□□□□□ -0.39
NDUFA3-208ENST00000422029 CAPSQ13938 189 aa12.62□□□□□ -0.39
NDUFA3-208ENST00000422029 BMS1Q14692 1282 aaKnown RBP12.62□□□□□ -0.39
NDUFA3-208ENST00000422029 PTPN14Q15678 1187 aa12.62□□□□□ -0.39
NDUFA3-208ENST00000422029 ZNF174Q15697 407 aa12.62□□□□□ -0.39
NDUFA3-208ENST00000422029 FAM43BQ6ZT52 329 aaPredicted RBP12.62□□□□□ -0.39
NDUFA3-208ENST00000422029 CABP7Q86V35 215 aa12.62□□□□□ -0.39
NDUFA3-208ENST00000422029 SUGP1Q8IWZ8 645 aaKnown RBP12.62□□□□□ -0.39
NDUFA3-208ENST00000422029 SLFN12Q8IYM2 578 aa12.62□□□□□ -0.39
NDUFA3-208ENST00000422029 FBXL6Q8N531 539 aa12.62□□□□□ -0.39
NDUFA3-208ENST00000422029 TCP11Q8WWU5 503 aa12.62□□□□□ -0.39
NDUFA3-208ENST00000422029 CCDC43Q96MW1 224 aaKnown RBP12.62□□□□□ -0.39
NDUFA3-208ENST00000422029 HSD17B14Q9BPX1 270 aa12.62□□□□□ -0.39
NDUFA3-208ENST00000422029 TRAIPQ9BWF2 469 aa12.62□□□□□ -0.39
NDUFA3-208ENST00000422029 NXF3Q9H4D5 531 aaKnown RBP12.62□□□□□ -0.39
NDUFA3-208ENST00000422029 BRMS1Q9HCU9 246 aa12.62□□□□□ -0.39
NDUFA3-208ENST00000422029 DBR1Q9UK59 544 aaKnown RBP12.62□□□□□ -0.39
NDUFA3-208ENST00000422029 ARL5CA6NH57 179 aa12.61□□□□□ -0.39
NDUFA3-208ENST00000422029 TTLL13PA6NNM8 815 aa12.61□□□□□ -0.39
NDUFA3-208ENST00000422029 NEMFO60524 1076 aa12.61□□□□□ -0.39
NDUFA3-208ENST00000422029 ARF4P18085 180 aaPredicted RBP12.61□□□□□ -0.39
NDUFA3-208ENST00000422029 PTENP60484 403 aa12.61□□□□□ -0.39
NDUFA3-208ENST00000422029 MBTD1Q05BQ5 628 aa12.61□□□□□ -0.39
NDUFA3-208ENST00000422029 SIGLEC14Q08ET2 396 aa12.61□□□□□ -0.39
NDUFA3-208ENST00000422029 TRIM29Q14134 588 aa12.61□□□□□ -0.39
NDUFA3-208ENST00000422029 NBR1Q14596 966 aa12.61□□□□□ -0.39
NDUFA3-208ENST00000422029 ATAT1Q5SQI0 421 aa12.61□□□□□ -0.39
NDUFA3-208ENST00000422029 CCDC83Q8IWF9 413 aa12.61□□□□□ -0.39
NDUFA3-208ENST00000422029 ASIC4Q96FT7 647 aa12.61□□□□□ -0.39
NDUFA3-208ENST00000422029 NAP1L4Q99733 375 aaKnown RBP12.61□□□□□ -0.39
NDUFA3-208ENST00000422029 CXCL16Q9H2A7 254 aa12.61□□□□□ -0.39
NDUFA3-208ENST00000422029 MARCH5Q9NX47 278 aa12.61□□□□□ -0.39
NDUFA3-208ENST00000422029 PARP2Q9UGN5 583 aa12.61□□□□□ -0.39
NDUFA3-208ENST00000422029 MYO10Q9HD67 2058 aa12.61□□□□□ -0.39
NDUFA3-208ENST00000422029 LRRIQ4A6NIV6 560 aa12.6□□□□□ -0.39
NDUFA3-208ENST00000422029 ASAP2O43150 1006 aa12.6□□□□□ -0.39
NDUFA3-208ENST00000422029 MED24O75448 989 aa12.6□□□□□ -0.39
NDUFA3-208ENST00000422029 SPATA31C1P0DKV0 1188 aa12.6□□□□□ -0.39
NDUFA3-208ENST00000422029 RPL17P18621 184 aaKnown RBP12.6□□□□□ -0.39
NDUFA3-208ENST00000422029 NCLP19338 710 aaKnown RBP12.6□□□□□ -0.39
NDUFA3-208ENST00000422029 ARL2P36404 184 aa12.6□□□□□ -0.39
NDUFA3-208ENST00000422029 RARRES1P49788 294 aa12.6□□□□□ -0.39
NDUFA3-208ENST00000422029 ANAPC15P60006 121 aa12.6□□□□□ -0.39
NDUFA3-208ENST00000422029 ITIH3Q06033 890 aa12.6□□□□□ -0.39
NDUFA3-208ENST00000422029 AMHR2Q16671 573 aa12.6□□□□□ -0.39
NDUFA3-208ENST00000422029 PALB2Q86YC2 1186 aa12.6□□□□□ -0.39
NDUFA3-208ENST00000422029 COLGALT2Q8IYK4 626 aa12.6□□□□□ -0.39
NDUFA3-208ENST00000422029 FAM177A1Q8N128 213 aaPredicted RBP12.6□□□□□ -0.39
NDUFA3-208ENST00000422029 HASPINQ8TF76 798 aa12.6□□□□□ -0.39
NDUFA3-208ENST00000422029 RIPOR3Q96MK2 946 aa12.6□□□□□ -0.39
NDUFA3-208ENST00000422029 MTMR9Q96QG7 549 aa12.6□□□□□ -0.39
NDUFA3-208ENST00000422029 CSRNP2Q9H175 543 aa12.6□□□□□ -0.39
NDUFA3-208ENST00000422029 NR2E1Q9Y466 385 aa12.6□□□□□ -0.39
NDUFA3-208ENST00000422029 ARID2Q68CP9 1835 aa12.6□□□□□ -0.39
NDUFA3-208ENST00000422029 FSD2A1L4K1 749 aa12.59□□□□□ -0.39
NDUFA3-208ENST00000422029 H0Y858 1186 aa12.59□□□□□ -0.39
NDUFA3-208ENST00000422029 TEX28O15482 410 aa12.59□□□□□ -0.39
NDUFA3-208ENST00000422029 AVPR2P30518 371 aa12.59□□□□□ -0.39
NDUFA3-208ENST00000422029 MTHFRP42898 656 aa12.59□□□□□ -0.39
NDUFA3-208ENST00000422029 TCF15Q12870 199 aa12.59□□□□□ -0.39
NDUFA3-208ENST00000422029 TFDP1Q14186 410 aa12.59□□□□□ -0.39
NDUFA3-208ENST00000422029 NOTUMQ6P988 496 aa12.59□□□□□ -0.39
NDUFA3-208ENST00000422029 POTEGQ6S5H5 508 aa12.59□□□□□ -0.39
NDUFA3-208ENST00000422029 BMP8AQ7Z5Y6 402 aa12.59□□□□□ -0.39
NDUFA3-208ENST00000422029 CATSPER3Q86XQ3 398 aa12.59□□□□□ -0.39
NDUFA3-208ENST00000422029 TDRD5Q8NAT2 981 aaKnown RBP12.59□□□□□ -0.39
NDUFA3-208ENST00000422029 BSNDQ8WZ55 320 aa12.59□□□□□ -0.39
NDUFA3-208ENST00000422029 PAAF1Q9BRP4 392 aa12.59□□□□□ -0.39
NDUFA3-208ENST00000422029 EMILIN2Q9BXX0 1053 aa12.59□□□□□ -0.39
NDUFA3-208ENST00000422029 TRIM6Q9C030 488 aaPredicted RBP12.59□□□□□ -0.39
NDUFA3-208ENST00000422029 MRPL17Q9NRX2 175 aaKnown RBP12.59□□□□□ -0.39
NDUFA3-208ENST00000422029 ANKEF1Q9NU02 776 aa12.59□□□□□ -0.39
NDUFA3-208ENST00000422029 ZNF318Q5VUA4 2279 aa12.59□□□□□ -0.39
NDUFA3-208ENST00000422029 LILRB3O75022 631 aa12.58□□□□□ -0.4
NDUFA3-208ENST00000422029 RFPL2O75678 378 aa12.58□□□□□ -0.4
NDUFA3-208ENST00000422029 DGAT1O75907 488 aa12.58□□□□□ -0.4
NDUFA3-208ENST00000422029 CLCN4P51793 760 aa12.58□□□□□ -0.4
NDUFA3-208ENST00000422029 NCBP1Q09161 790 aaKnown RBP12.58□□□□□ -0.4
NDUFA3-208ENST00000422029 MXD4Q14582 209 aaPredicted RBP12.58□□□□□ -0.4
NDUFA3-208ENST00000422029 TMEM132AQ24JP5 1023 aa12.58□□□□□ -0.4
NDUFA3-208ENST00000422029 KIAA1841Q6NSI8 718 aa12.58□□□□□ -0.4
NDUFA3-208ENST00000422029 EXOC8Q8IYI6 725 aa12.58□□□□□ -0.4
NDUFA3-208ENST00000422029 RSAD2Q8WXG1 361 aa12.58□□□□□ -0.4
NDUFA3-208ENST00000422029 NECTIN4Q96NY8 510 aa12.58□□□□□ -0.4
NDUFA3-208ENST00000422029 TMEM175Q9BSA9 504 aa12.58□□□□□ -0.4
NDUFA3-208ENST00000422029 KIFC3Q9BVG8 833 aa12.58□□□□□ -0.4
NDUFA3-208ENST00000422029 GPR62Q9BZJ7 368 aa12.58□□□□□ -0.4
NDUFA3-208ENST00000422029 MAN1C1Q9NR34 630 aa12.58□□□□□ -0.4
NDUFA3-208ENST00000422029 DZANK1Q9NVP4 752 aa12.58□□□□□ -0.4
NDUFA3-208ENST00000422029 KANSL3Q9P2N6 904 aa12.58□□□□□ -0.4
NDUFA3-208ENST00000422029 CNTNAP2Q9UHC6 1331 aa12.58□□□□□ -0.4
NDUFA3-208ENST00000422029 CCDC195A0A1B0GUA6 201 aa12.57□□□□□ -0.4
NDUFA3-208ENST00000422029 LYPLA2O95372 231 aa12.57□□□□□ -0.4
NDUFA3-208ENST00000422029 SOD2P04179 222 aa12.57□□□□□ -0.4
NDUFA3-208ENST00000422029 EDN1P05305 212 aa12.57□□□□□ -0.4
NDUFA3-208ENST00000422029 URODP06132 367 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms