RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 STRA6Q9BX79 667 aa11.83□□□□□ -0.52
DDX56-203ENST00000421223 DPH5Q9H2P9 285 aa11.83□□□□□ -0.52
DDX56-203ENST00000421223 HOXC10Q9NYD6 342 aa11.83□□□□□ -0.52
DDX56-203ENST00000421223 GPRC5DQ9NZD1 345 aa11.83□□□□□ -0.52
DDX56-203ENST00000421223 AMACRQ9UHK6 382 aa11.83□□□□□ -0.52
DDX56-203ENST00000421223 NOC2LQ9Y3T9 749 aaKnown RBP11.83□□□□□ -0.52
DDX56-203ENST00000421223 KCNA2P16389 499 aa11.83□□□□□ -0.52
DDX56-203ENST00000421223 LIG4P49917 911 aa11.83□□□□□ -0.52
DDX56-203ENST00000421223 IRX3P78415 501 aaPredicted RBP11.83□□□□□ -0.52
DDX56-203ENST00000421223 C1orf220Q5T0J3 134 aa11.83□□□□□ -0.52
DDX56-203ENST00000421223 TATDN2Q93075 761 aa11.83□□□□□ -0.52
DDX56-203ENST00000421223 IWS1Q96ST2 819 aa11.83□□□□□ -0.52
DDX56-203ENST00000421223 CELF4Q9BZC1 486 aaKnown RBP11.83□□□□□ -0.52
DDX56-203ENST00000421223 ANKEF1Q9NU02 776 aa11.83□□□□□ -0.52
DDX56-203ENST00000421223 ADGRA3Q8IWK6 1321 aa11.83□□□□□ -0.52
DDX56-203ENST00000421223 SYF2O95926 243 aaKnown RBP11.82□□□□□ -0.52
DDX56-203ENST00000421223 VGLL4Q14135 290 aa11.82□□□□□ -0.52
DDX56-203ENST00000421223 SUPT20HL1Q3ZLR7 823 aa11.82□□□□□ -0.52
DDX56-203ENST00000421223 SLC9A9Q8IVB4 645 aa11.82□□□□□ -0.52
DDX56-203ENST00000421223 LRRC57Q8N9N7 239 aa11.82□□□□□ -0.52
DDX56-203ENST00000421223 LMO3Q8TAP4 145 aa11.82□□□□□ -0.52
DDX56-203ENST00000421223 FAM71BQ8TC56 605 aa11.82□□□□□ -0.52
DDX56-203ENST00000421223 GPRASP2Q96D09 838 aa11.82□□□□□ -0.52
DDX56-203ENST00000421223 ZBTB45Q96K62 511 aaPredicted RBP11.82□□□□□ -0.52
DDX56-203ENST00000421223 TCHPQ9BT92 498 aa11.82□□□□□ -0.52
DDX56-203ENST00000421223 ELP3Q9H9T3 547 aa11.82□□□□□ -0.52
DDX56-203ENST00000421223 CYP26B1Q9NR63 512 aa11.82□□□□□ -0.52
DDX56-203ENST00000421223 FBXL5Q9UKA1 691 aa11.82□□□□□ -0.52
DDX56-203ENST00000421223 C19orf81C9J6K1 198 aa11.82□□□□□ -0.52
DDX56-203ENST00000421223 PGRMC1O00264 195 aaKnown RBP11.82□□□□□ -0.52
DDX56-203ENST00000421223 MMEP08473 750 aa11.82□□□□□ -0.52
DDX56-203ENST00000421223 ALCAMQ13740 583 aa11.82□□□□□ -0.52
DDX56-203ENST00000421223 STXBP2Q15833 593 aa11.82□□□□□ -0.52
DDX56-203ENST00000421223 CASKIN2Q8WXE0 1202 aa11.82□□□□□ -0.52
DDX56-203ENST00000421223 R3HDMLQ9H3Y0 253 aa11.82□□□□□ -0.52
DDX56-203ENST00000421223 SART1O43290 800 aaKnown RBP11.81□□□□□ -0.52
DDX56-203ENST00000421223 HSF2BPO75031 334 aa11.81□□□□□ -0.52
DDX56-203ENST00000421223 KRT39Q6A163 491 aa11.81□□□□□ -0.52
DDX56-203ENST00000421223 MIS18BP1Q6P0N0 1132 aa11.81□□□□□ -0.52
DDX56-203ENST00000421223 NT5DC3Q86UY8 548 aa11.81□□□□□ -0.52
DDX56-203ENST00000421223 SYCE1Q8N0S2 351 aa11.81□□□□□ -0.52
DDX56-203ENST00000421223 PARD3BQ8TEW8 1205 aa11.81□□□□□ -0.52
DDX56-203ENST00000421223 AENQ8WTP8 325 aaKnown RBP11.81□□□□□ -0.52
DDX56-203ENST00000421223 RFFLQ8WZ73 363 aa11.81□□□□□ -0.52
DDX56-203ENST00000421223 FNBP1Q96RU3 617 aa11.81□□□□□ -0.52
DDX56-203ENST00000421223 PLCD4Q9BRC7 762 aa11.81□□□□□ -0.52
DDX56-203ENST00000421223 MAP3K20Q9NYL2 800 aaKnown RBP11.81□□□□□ -0.52
DDX56-203ENST00000421223 RNF14Q9UBS8 474 aa11.81□□□□□ -0.52
DDX56-203ENST00000421223 NR2E1Q9Y466 385 aa11.81□□□□□ -0.52
DDX56-203ENST00000421223 PFASO15067 1338 aa11.81□□□□□ -0.52
DDX56-203ENST00000421223 LYPLA2O95372 231 aa11.81□□□□□ -0.52
DDX56-203ENST00000421223 KRT14P02533 472 aa11.81□□□□□ -0.52
DDX56-203ENST00000421223 PGK2P07205 417 aa11.81□□□□□ -0.52
DDX56-203ENST00000421223 EPHB4P54760 987 aa11.81□□□□□ -0.52
DDX56-203ENST00000421223 NCKAP1LP55160 1127 aa11.81□□□□□ -0.52
DDX56-203ENST00000421223 NFIL3Q16649 462 aa11.81□□□□□ -0.52
DDX56-203ENST00000421223 SV2AQ7L0J3 742 aa11.81□□□□□ -0.52
DDX56-203ENST00000421223 MAATS1Q7Z4T9 603 aa11.81□□□□□ -0.52
DDX56-203ENST00000421223 NOP9Q86U38 636 aaKnown RBP11.81□□□□□ -0.52
DDX56-203ENST00000421223 CPNE8Q86YQ8 564 aa11.81□□□□□ -0.52
DDX56-203ENST00000421223 REPS2Q8NFH8 660 aa11.81□□□□□ -0.52
DDX56-203ENST00000421223 KIFAP3Q92845 792 aa11.81□□□□□ -0.52
DDX56-203ENST00000421223 KREMEN1Q96MU8 473 aa11.81□□□□□ -0.52
DDX56-203ENST00000421223 ATP6V0A4Q9HBG4 840 aa11.81□□□□□ -0.52
DDX56-203ENST00000421223 XPNPEP1Q9NQW7 623 aa11.81□□□□□ -0.52
DDX56-203ENST00000421223 COG5Q9UP83 839 aa11.81□□□□□ -0.52
DDX56-203ENST00000421223 CSADQ9Y600 493 aa11.81□□□□□ -0.52
DDX56-203ENST00000421223 USP2O75604 605 aaPredicted RBP11.81□□□□□ -0.52
DDX56-203ENST00000421223 FDX1P10109 184 aa11.81□□□□□ -0.52
DDX56-203ENST00000421223 STRN3Q13033 797 aa11.81□□□□□ -0.52
DDX56-203ENST00000421223 SPOPLQ6IQ16 392 aa11.81□□□□□ -0.52
DDX56-203ENST00000421223 SLC39A4Q6P5W5 647 aa11.81□□□□□ -0.52
DDX56-203ENST00000421223 SULF1Q8IWU6 871 aa11.81□□□□□ -0.52
DDX56-203ENST00000421223 DEPTORQ8TB45 409 aa11.81□□□□□ -0.52
DDX56-203ENST00000421223 AFAP1L1Q8TED9 768 aa11.81□□□□□ -0.52
DDX56-203ENST00000421223 CLMNQ96JQ2 1002 aa11.81□□□□□ -0.52
DDX56-203ENST00000421223 NT5C1BQ96P26 610 aa11.81□□□□□ -0.52
DDX56-203ENST00000421223 PCDHB18PQ96TA0 734 aa11.81□□□□□ -0.52
DDX56-203ENST00000421223 MED4Q9NPJ6 270 aa11.81□□□□□ -0.52
DDX56-203ENST00000421223 ZNF302Q9NR11 478 aa11.81□□□□□ -0.52
DDX56-203ENST00000421223 GOLGA6CA6NDK9 693 aa11.8□□□□□ -0.52
DDX56-203ENST00000421223 TTI1O43156 1089 aa11.8□□□□□ -0.52
DDX56-203ENST00000421223 DGAT1O75907 488 aa11.8□□□□□ -0.52
DDX56-203ENST00000421223 TMEM253P0C7T8 217 aa11.8□□□□□ -0.52
DDX56-203ENST00000421223 GOLGA6DP0CG33 693 aa11.8□□□□□ -0.52
DDX56-203ENST00000421223 MFAP3P55082 362 aa11.8□□□□□ -0.52
DDX56-203ENST00000421223 HNRNPH2P55795 449 aaKnown RBP11.8□□□□□ -0.52
DDX56-203ENST00000421223 PAK2Q13177 524 aa11.8□□□□□ -0.52
DDX56-203ENST00000421223 CFAP58Q5T655 872 aa11.8□□□□□ -0.52
DDX56-203ENST00000421223 GLG1Q92896 1179 aa11.8□□□□□ -0.52
DDX56-203ENST00000421223 PBKQ96KB5 322 aa11.8□□□□□ -0.52
DDX56-203ENST00000421223 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.8□□□□□ -0.528e-8■■■□□ 14.7
DDX56-203ENST00000421223 TARS2Q9BW92 718 aaKnown RBP11.8□□□□□ -0.52
DDX56-203ENST00000421223 RAB20Q9NX57 234 aa11.8□□□□□ -0.52
DDX56-203ENST00000421223 GOLGA6AQ9NYA3 693 aa11.8□□□□□ -0.52
DDX56-203ENST00000421223 ALG6Q9Y672 507 aa11.8□□□□□ -0.52
DDX56-203ENST00000421223 ANKRD62A6NC57 917 aa11.8□□□□□ -0.52
DDX56-203ENST00000421223 K7ERI5 159 aa11.8□□□□□ -0.52
DDX56-203ENST00000421223 AGPSO00116 658 aa11.8□□□□□ -0.52
DDX56-203ENST00000421223 SRGAP2CP0DJJ0 459 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms