RNA–Protein interactions for RNA: ENST00000420455.5

TMEM50B-201, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 3,062 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-201ENST00000420455 FAM189A1O60320 539 aa14.57□□□□□ -0.08
TMEM50B-201ENST00000420455 KRT13P13646 458 aa14.57□□□□□ -0.08
TMEM50B-201ENST00000420455 POLR2FP61218 127 aaKnown RBP14.57□□□□□ -0.08
TMEM50B-201ENST00000420455 CYP24A1Q07973 514 aa14.57□□□□□ -0.08
TMEM50B-201ENST00000420455 PPP3CAQ08209 521 aa14.57□□□□□ -0.08
TMEM50B-201ENST00000420455 HSP90AA2PQ14568 343 aaPredicted RBP14.57□□□□□ -0.08
TMEM50B-201ENST00000420455 DGKDQ16760 1214 aa14.57□□□□□ -0.08
TMEM50B-201ENST00000420455 SLFN12LQ6IEE8 588 aa14.57□□□□□ -0.08
TMEM50B-201ENST00000420455 RRAGAQ7L523 313 aa14.57□□□□□ -0.08
TMEM50B-201ENST00000420455 CBWD2Q8IUF1 395 aa14.57□□□□□ -0.08
TMEM50B-201ENST00000420455 MRFAP1Q9Y605 127 aa14.57□□□□□ -0.08
TMEM50B-201ENST00000420455 A0A0B4J269 797 aa14.57□□□□□ -0.08
TMEM50B-201ENST00000420455 K7ERI5 159 aa14.57□□□□□ -0.08
TMEM50B-201ENST00000420455 ACTN1P12814 892 aa14.57□□□□□ -0.08
TMEM50B-201ENST00000420455 INSRRP14616 1297 aa14.57□□□□□ -0.08
TMEM50B-201ENST00000420455 RFX1P22670 979 aa14.57□□□□□ -0.08
TMEM50B-201ENST00000420455 PROZP22891 400 aa14.57□□□□□ -0.08
TMEM50B-201ENST00000420455 NKX3-2P78367 333 aa14.57□□□□□ -0.08
TMEM50B-201ENST00000420455 STRN3Q13033 797 aa14.57□□□□□ -0.08
TMEM50B-201ENST00000420455 MARCH8Q5T0T0 291 aa14.57□□□□□ -0.08
TMEM50B-201ENST00000420455 CRELD2Q6UXH1 353 aaPredicted RBP14.57□□□□□ -0.08
TMEM50B-201ENST00000420455 EHBP1Q8NDI1 1231 aa14.57□□□□□ -0.08
TMEM50B-201ENST00000420455 OR6J1Q8NGC5 347 aa14.57□□□□□ -0.08
TMEM50B-201ENST00000420455 C2orf40Q9H1Z8 148 aa14.57□□□□□ -0.08
TMEM50B-201ENST00000420455 FZD8Q9H461 694 aa14.57□□□□□ -0.08
TMEM50B-201ENST00000420455 ABT1Q9ULW3 272 aaKnown RBP14.57□□□□□ -0.08
TMEM50B-201ENST00000420455 HNRNPDLO14979 420 aaKnown RBP14.56□□□□□ -0.08
TMEM50B-201ENST00000420455 CASQ1P31415 396 aa14.56□□□□□ -0.08
TMEM50B-201ENST00000420455 PRKCIP41743 596 aa14.56□□□□□ -0.08
TMEM50B-201ENST00000420455 CCL14Q16627 93 aa14.56□□□□□ -0.08
TMEM50B-201ENST00000420455 FAM187BQ17R55 369 aa14.56□□□□□ -0.08
TMEM50B-201ENST00000420455 TCERG1LQ5VWI1 586 aa14.56□□□□□ -0.08
TMEM50B-201ENST00000420455 C15orf39Q6ZRI6 1047 aa14.56□□□□□ -0.08
TMEM50B-201ENST00000420455 IRF2BP2Q7Z5L9 587 aa14.56□□□□□ -0.08
TMEM50B-201ENST00000420455 SUCLA2Q9P2R7 463 aaPredicted RBP14.56□□□□□ -0.08
TMEM50B-201ENST00000420455 TRPC6Q9Y210 931 aa14.56□□□□□ -0.08
TMEM50B-201ENST00000420455 THSD7BQ9C0I4 1608 aa14.56□□□□□ -0.08
TMEM50B-201ENST00000420455 LRRIQ4A6NIV6 560 aa14.56□□□□□ -0.08
TMEM50B-201ENST00000420455 H3BRB1 525 aa14.56□□□□□ -0.08
TMEM50B-201ENST00000420455 URI1O94763 535 aaPredicted RBP14.56□□□□□ -0.08
TMEM50B-201ENST00000420455 SERPING1P05155 500 aa14.56□□□□□ -0.08
TMEM50B-201ENST00000420455 TRIM49P0CI25 452 aa14.56□□□□□ -0.08
TMEM50B-201ENST00000420455 TRIM49CP0CI26 452 aa14.56□□□□□ -0.08
TMEM50B-201ENST00000420455 GPR88Q9GZN0 384 aa14.56□□□□□ -0.08
TMEM50B-201ENST00000420455 TUT1Q9H6E5 874 aaKnown RBP14.56□□□□□ -0.08
TMEM50B-201ENST00000420455 PTPRHQ9HD43 1115 aa14.56□□□□□ -0.08
TMEM50B-201ENST00000420455 AJAP1Q9UKB5 411 aaPredicted RBP14.56□□□□□ -0.08
TMEM50B-201ENST00000420455 ZHX1Q9UKY1 873 aaPredicted RBP14.56□□□□□ -0.08
TMEM50B-201ENST00000420455 LRRIQ3A6PVS8 624 aaPredicted RBP14.55□□□□□ -0.08
TMEM50B-201ENST00000420455 F2P00734 622 aa14.55□□□□□ -0.08
TMEM50B-201ENST00000420455 CYLC1P35663 651 aaPredicted RBP14.55□□□□□ -0.08
TMEM50B-201ENST00000420455 MYL7Q01449 175 aa14.55□□□□□ -0.08
TMEM50B-201ENST00000420455 SFMBT2Q5VUG0 894 aa14.55□□□□□ -0.08
TMEM50B-201ENST00000420455 EFCAB12Q6NXP0 572 aa14.55□□□□□ -0.08
TMEM50B-201ENST00000420455 CACNA2D4Q7Z3S7 1137 aa14.55□□□□□ -0.08
TMEM50B-201ENST00000420455 GPIHBP1Q8IV16 184 aa14.55□□□□□ -0.08
TMEM50B-201ENST00000420455 TRAPPC12Q8WVT3 735 aa14.55□□□□□ -0.08
TMEM50B-201ENST00000420455 POMGNT1Q8WZA1 660 aa14.55□□□□□ -0.08
TMEM50B-201ENST00000420455 LACRTQ9GZZ8 138 aa14.55□□□□□ -0.08
TMEM50B-201ENST00000420455 INTS2Q9H0H0 1204 aaKnown RBP14.55□□□□□ -0.08
TMEM50B-201ENST00000420455 FHOD1Q9Y613 1164 aa14.55□□□□□ -0.08
TMEM50B-201ENST00000420455 HAS3O00219 553 aa14.55□□□□□ -0.08
TMEM50B-201ENST00000420455 LIG4P49917 911 aa14.55□□□□□ -0.08
TMEM50B-201ENST00000420455 PTENP60484 403 aa14.55□□□□□ -0.08
TMEM50B-201ENST00000420455 PSMD6Q15008 389 aa14.55□□□□□ -0.08
TMEM50B-201ENST00000420455 ELF2Q15723 593 aa14.55□□□□□ -0.08
TMEM50B-201ENST00000420455 MTHFD1LQ6UB35 978 aa14.55□□□□□ -0.08
TMEM50B-201ENST00000420455 ACO2Q99798 780 aaKnown RBP14.55□□□□□ -0.08
TMEM50B-201ENST00000420455 TMEM117Q9H0C3 514 aa14.55□□□□□ -0.08
TMEM50B-201ENST00000420455 ATP8B3O60423 1300 aa14.55□□□□□ -0.08
TMEM50B-201ENST00000420455 LDHAP00338 332 aaKnown RBP14.55□□□□□ -0.08
TMEM50B-201ENST00000420455 ZNF286BP0CG31 522 aa14.55□□□□□ -0.08
TMEM50B-201ENST00000420455 ANXA13P27216 316 aa14.55□□□□□ -0.08
TMEM50B-201ENST00000420455 KRT83P78385 493 aa14.55□□□□□ -0.08
TMEM50B-201ENST00000420455 NOGQ13253 232 aa14.55□□□□□ -0.08
TMEM50B-201ENST00000420455 IQCEQ6IPM2 695 aa14.55□□□□□ -0.08
TMEM50B-201ENST00000420455 TSHZ1Q6ZSZ6 1077 aa14.55□□□□□ -0.08
TMEM50B-201ENST00000420455 SLC35F6Q8N357 371 aa14.55□□□□□ -0.08
TMEM50B-201ENST00000420455 LRRC71Q8N4P6 559 aa14.55□□□□□ -0.08
TMEM50B-201ENST00000420455 RDH13Q8NBN7 331 aa14.55□□□□□ -0.08
TMEM50B-201ENST00000420455 KAT2BQ92831 832 aa14.55□□□□□ -0.08
TMEM50B-201ENST00000420455 SAAL1Q96ER3 474 aa14.55□□□□□ -0.08
TMEM50B-201ENST00000420455 STK33Q9BYT3 514 aa14.55□□□□□ -0.08
TMEM50B-201ENST00000420455 IFT122Q9HBG6 1241 aa14.55□□□□□ -0.08
TMEM50B-201ENST00000420455 TMEM8AQ9HCN3 771 aa14.55□□□□□ -0.08
TMEM50B-201ENST00000420455 NENFQ9UMX5 172 aa14.55□□□□□ -0.08
TMEM50B-201ENST00000420455 TADA3O75528 432 aa14.54□□□□□ -0.08
TMEM50B-201ENST00000420455 CYP27A1Q02318 531 aa14.54□□□□□ -0.08
TMEM50B-201ENST00000420455 GRM1Q13255 1194 aa14.54□□□□□ -0.08
TMEM50B-201ENST00000420455 TFDP1Q14186 410 aa14.54□□□□□ -0.08
TMEM50B-201ENST00000420455 ARHGAP29Q52LW3 1261 aa14.54□□□□□ -0.08
TMEM50B-201ENST00000420455 ZNF569Q5MCW4 686 aa14.54□□□□□ -0.08
TMEM50B-201ENST00000420455 PRAMEF19Q5SWL8 479 aa14.54□□□□□ -0.08
TMEM50B-201ENST00000420455 NLRC4Q9NPP4 1024 aa14.54□□□□□ -0.08
TMEM50B-201ENST00000420455 APEX2Q9UBZ4 518 aa14.54□□□□□ -0.08
TMEM50B-201ENST00000420455 TNPO2O14787 897 aaKnown RBP14.54□□□□□ -0.08
TMEM50B-201ENST00000420455 KIF5CO60282 957 aa14.54□□□□□ -0.08
TMEM50B-201ENST00000420455 TFRCP02786 760 aaKnown RBP14.54□□□□□ -0.08
TMEM50B-201ENST00000420455 KLRC1P26715 233 aa14.54□□□□□ -0.08
TMEM50B-201ENST00000420455 ADAM17P78536 824 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms