RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 LAMA3Q16787 3333 aa14.02□□□□□ -0.17
LINC00642-201ENST00000419459 FRMD3A2A2Y4 597 aa14.02□□□□□ -0.17
LINC00642-201ENST00000419459 LRRC10BA6NIK2 292 aa14.02□□□□□ -0.17
LINC00642-201ENST00000419459 HAS3O00219 553 aa14.02□□□□□ -0.17
LINC00642-201ENST00000419459 RHOBTB3O94955 611 aa14.02□□□□□ -0.17
LINC00642-201ENST00000419459 KLRC1P26715 233 aa14.02□□□□□ -0.17
LINC00642-201ENST00000419459 CASP14P31944 242 aa14.02□□□□□ -0.17
LINC00642-201ENST00000419459 ACLYP53396 1101 aa14.02□□□□□ -0.17
LINC00642-201ENST00000419459 EHHADHQ08426 723 aa14.02□□□□□ -0.17
LINC00642-201ENST00000419459 MKRN4PQ13434 485 aaPredicted RBP14.02□□□□□ -0.17
LINC00642-201ENST00000419459 NBPF20Q3BBV1 942 aa14.02□□□□□ -0.17
LINC00642-201ENST00000419459 FAM47CQ5HY64 1035 aa14.02□□□□□ -0.17
LINC00642-201ENST00000419459 ODR4Q5SWX8 454 aa14.02□□□□□ -0.17
LINC00642-201ENST00000419459 TRAPPC11Q7Z392 1133 aa14.02□□□□□ -0.17
LINC00642-201ENST00000419459 CCDC91Q7Z6B0 441 aa14.02□□□□□ -0.17
LINC00642-201ENST00000419459 CCDC65Q8IXS2 484 aa14.02□□□□□ -0.17
LINC00642-201ENST00000419459 VTI1AQ96AJ9 217 aa14.02□□□□□ -0.17
LINC00642-201ENST00000419459 LRRC27Q9C0I9 530 aa14.02□□□□□ -0.17
LINC00642-201ENST00000419459 PARVGQ9HBI0 331 aa14.02□□□□□ -0.17
LINC00642-201ENST00000419459 ABHD10Q9NUJ1 306 aa14.02□□□□□ -0.17
LINC00642-201ENST00000419459 KCND2Q9NZV8 630 aa14.02□□□□□ -0.17
LINC00642-201ENST00000419459 ATXN2Q99700 1313 aaKnown RBP14.01□□□□□ -0.17
LINC00642-201ENST00000419459 C22orf31O95567 290 aa14.01□□□□□ -0.17
LINC00642-201ENST00000419459 CST5P28325 142 aaPredicted RBP14.01□□□□□ -0.17
LINC00642-201ENST00000419459 NMT1P30419 496 aaKnown RBP14.01□□□□□ -0.17
LINC00642-201ENST00000419459 PEX3P56589 373 aa14.01□□□□□ -0.17
LINC00642-201ENST00000419459 KCNA1Q09470 495 aa14.01□□□□□ -0.17
LINC00642-201ENST00000419459 EFCAB12Q6NXP0 572 aa14.01□□□□□ -0.17
LINC00642-201ENST00000419459 CNNM4Q6P4Q7 775 aa14.01□□□□□ -0.17
LINC00642-201ENST00000419459 C7orf31Q8N865 590 aa14.01□□□□□ -0.17
LINC00642-201ENST00000419459 NOA1Q8NC60 698 aaKnown RBP14.01□□□□□ -0.17
LINC00642-201ENST00000419459 MTG1Q9BT17 334 aaPredicted RBP14.01□□□□□ -0.17
LINC00642-201ENST00000419459 POLR3FQ9H1D9 316 aaPredicted RBP14.01□□□□□ -0.17
LINC00642-201ENST00000419459 IKZF4Q9H2S9 585 aa14.01□□□□□ -0.17
LINC00642-201ENST00000419459 HAUS4Q9H6D7 363 aa14.01□□□□□ -0.17
LINC00642-201ENST00000419459 LIMA1Q9UHB6 759 aaKnown RBP14.01□□□□□ -0.17
LINC00642-201ENST00000419459 GRIN2DO15399 1336 aa14.01□□□□□ -0.17
LINC00642-201ENST00000419459 PVALEFA0A1B0GWK0 134 aa14□□□□□ -0.17
LINC00642-201ENST00000419459 TREHO43280 583 aa14□□□□□ -0.17
LINC00642-201ENST00000419459 MAFO75444 373 aaPredicted RBP14□□□□□ -0.17
LINC00642-201ENST00000419459 PRCPP42785 496 aa14□□□□□ -0.17
LINC00642-201ENST00000419459 NKX3-2P78367 333 aa14□□□□□ -0.17
LINC00642-201ENST00000419459 TMEM62Q0P6H9 643 aa14□□□□□ -0.17
LINC00642-201ENST00000419459 STIM1Q13586 685 aa14□□□□□ -0.17
LINC00642-201ENST00000419459 KCNB1Q14721 858 aa14□□□□□ -0.17
LINC00642-201ENST00000419459 ZC2HC1CQ53FD0 456 aaPredicted RBP14□□□□□ -0.17
LINC00642-201ENST00000419459 FAM26FQ5R3K3 315 aa14□□□□□ -0.17
LINC00642-201ENST00000419459 ZNF658Q5TYW1 1059 aaPredicted RBP14□□□□□ -0.17
LINC00642-201ENST00000419459 IQCEQ6IPM2 695 aa14□□□□□ -0.17
LINC00642-201ENST00000419459 PCSK9Q8NBP7 692 aaKnown RBP14□□□□□ -0.17
LINC00642-201ENST00000419459 ANKRD20A12PQ8NF67 263 aa14□□□□□ -0.17
LINC00642-201ENST00000419459 EEF2KMTQ96G04 330 aa14□□□□□ -0.17
LINC00642-201ENST00000419459 FIZ1Q96SL8 496 aa14□□□□□ -0.17
LINC00642-201ENST00000419459 KATNAL1Q9BW62 490 aa14□□□□□ -0.17
LINC00642-201ENST00000419459 ODF2LQ9ULJ1 636 aa14□□□□□ -0.17
LINC00642-201ENST00000419459 PCDHA2Q9Y5H9 948 aa14□□□□□ -0.17
LINC00642-201ENST00000419459 ADGRA3Q8IWK6 1321 aa14□□□□□ -0.17
LINC00642-201ENST00000419459 ZEB2O60315 1214 aa14□□□□□ -0.17
LINC00642-201ENST00000419459 PHACTR2O75167 634 aa14□□□□□ -0.17
LINC00642-201ENST00000419459 VTNP04004 478 aa14□□□□□ -0.17
LINC00642-201ENST00000419459 MYBP10242 640 aa14□□□□□ -0.17
LINC00642-201ENST00000419459 ZNF131P52739 623 aa14□□□□□ -0.17
LINC00642-201ENST00000419459 NFRKBQ6P4R8 1299 aa14□□□□□ -0.17
LINC00642-201ENST00000419459 MTHFD1LQ6UB35 978 aa14□□□□□ -0.17
LINC00642-201ENST00000419459 RHPN2Q8IUC4 686 aa14□□□□□ -0.17
LINC00642-201ENST00000419459 FAM178BQ8IXR5 827 aa14□□□□□ -0.17
LINC00642-201ENST00000419459 MCPH1Q8NEM0 835 aa14□□□□□ -0.17
LINC00642-201ENST00000419459 ASAP3Q8TDY4 903 aa14□□□□□ -0.17
LINC00642-201ENST00000419459 CRACR2AQ9BSW2 395 aa14□□□□□ -0.17
LINC00642-201ENST00000419459 FAM49AQ9H0Q0 323 aaPredicted RBP14□□□□□ -0.17
LINC00642-201ENST00000419459 RMND1Q9NWS8 449 aa14□□□□□ -0.17
LINC00642-201ENST00000419459 COL4A3BPQ9Y5P4 624 aa14□□□□□ -0.17
LINC00642-201ENST00000419459 A0A1W2PQ45 241 aaPredicted RBP13.99□□□□□ -0.17
LINC00642-201ENST00000419459 A0A1W2PQY0 241 aa13.99□□□□□ -0.17
LINC00642-201ENST00000419459 CCDC169A6NNP5 214 aa13.99□□□□□ -0.17
LINC00642-201ENST00000419459 EBAG9O00559 213 aa13.99□□□□□ -0.17
LINC00642-201ENST00000419459 GCNT3O95395 438 aa13.99□□□□□ -0.17
LINC00642-201ENST00000419459 FXR1P51114 621 aaKnown RBP eCLIP13.99□□□□□ -0.17
LINC00642-201ENST00000419459 PAPD7Q5XG87 772 aaKnown RBP13.99□□□□□ -0.17
LINC00642-201ENST00000419459 RPAINQ86UA6 219 aa13.99□□□□□ -0.17
LINC00642-201ENST00000419459 NELFCDQ8IXH7 590 aa13.99□□□□□ -0.17
LINC00642-201ENST00000419459 ACRBPQ8NEB7 543 aa13.99□□□□□ -0.17
LINC00642-201ENST00000419459 FAM76AQ8TAV0 307 aa13.99□□□□□ -0.17
LINC00642-201ENST00000419459 U2AF1L4Q8WU68 220 aaKnown RBP13.99□□□□□ -0.17
LINC00642-201ENST00000419459 CPLX3Q8WVH0 158 aa13.99□□□□□ -0.17
LINC00642-201ENST00000419459 PRPF31Q8WWY3 499 aaKnown RBP13.99□□□□□ -0.17
LINC00642-201ENST00000419459 DRC1Q96MC2 740 aa13.99□□□□□ -0.17
LINC00642-201ENST00000419459 NRCAMQ92823 1304 aa13.99□□□□□ -0.17
LINC00642-201ENST00000419459 IGKV6-21A0A0C4DH24 114 aa13.98□□□□□ -0.17
LINC00642-201ENST00000419459 TRIM49BA6NDI0 452 aa13.98□□□□□ -0.17
LINC00642-201ENST00000419459 SLC16A4O15374 487 aa13.98□□□□□ -0.17
LINC00642-201ENST00000419459 CSDE1O75534 798 aaKnown RBP13.98□□□□□ -0.17
LINC00642-201ENST00000419459 ERLIN2O94905 339 aa13.98□□□□□ -0.17
LINC00642-201ENST00000419459 PLS3P13797 630 aa13.98□□□□□ -0.17
LINC00642-201ENST00000419459 GLRA2P23416 452 aa13.98□□□□□ -0.17
LINC00642-201ENST00000419459 RFC5P40937 340 aa13.98□□□□□ -0.17
LINC00642-201ENST00000419459 NPTX2P47972 431 aa13.98□□□□□ -0.17
LINC00642-201ENST00000419459 STX17P56962 302 aa13.98□□□□□ -0.17
LINC00642-201ENST00000419459 PKN2Q16513 984 aaKnown RBP13.98□□□□□ -0.17
LINC00642-201ENST00000419459 ZNF484Q5JVG2 852 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms