RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 MBTPS2O43462 519 aa18.2■□□□□ 0.5
LINC00404-201ENST00000418660 B4GALT3O60512 393 aa18.2■□□□□ 0.5
LINC00404-201ENST00000418660 DDHD2O94830 711 aa18.2■□□□□ 0.5
LINC00404-201ENST00000418660 GLP2RO95838 553 aa18.2■□□□□ 0.5
LINC00404-201ENST00000418660 POMCP01189 267 aa18.2■□□□□ 0.5
LINC00404-201ENST00000418660 ALDH2P05091 517 aa18.2■□□□□ 0.5
LINC00404-201ENST00000418660 SLC11A1P49279 550 aa18.2■□□□□ 0.5
LINC00404-201ENST00000418660 SMAD4Q13485 552 aaKnown RBP18.2■□□□□ 0.5
LINC00404-201ENST00000418660 SMC1AQ14683 1233 aaKnown RBP18.2■□□□□ 0.5
LINC00404-201ENST00000418660 BMS1Q14692 1282 aaKnown RBP18.2■□□□□ 0.5
LINC00404-201ENST00000418660 CLUL1Q15846 466 aa18.2■□□□□ 0.5
LINC00404-201ENST00000418660 MAPK6Q16659 721 aa18.2■□□□□ 0.5
LINC00404-201ENST00000418660 HYIQ5T013 277 aa18.2■□□□□ 0.5
LINC00404-201ENST00000418660 DDX53Q86TM3 631 aaKnown RBP18.2■□□□□ 0.5
LINC00404-201ENST00000418660 TMEM173Q86WV6 379 aaPredicted RBP18.2■□□□□ 0.5
LINC00404-201ENST00000418660 CDR2LQ86X02 465 aaPredicted RBP18.2■□□□□ 0.5
LINC00404-201ENST00000418660 MRPL43Q8N983 215 aaKnown RBP18.2■□□□□ 0.5
LINC00404-201ENST00000418660 DEPTORQ8TB45 409 aa18.2■□□□□ 0.5
LINC00404-201ENST00000418660 GAD1Q99259 594 aa18.2■□□□□ 0.5
LINC00404-201ENST00000418660 CCDC113Q9H0I3 377 aa18.2■□□□□ 0.5
LINC00404-201ENST00000418660 POLD4Q9HCU8 107 aa18.2■□□□□ 0.5
LINC00404-201ENST00000418660 GIT1Q9Y2X7 761 aa18.2■□□□□ 0.5
LINC00404-201ENST00000418660 ARL5CA6NH57 179 aa18.19■□□□□ 0.5
LINC00404-201ENST00000418660 ACKR2O00590 384 aa18.19■□□□□ 0.5
LINC00404-201ENST00000418660 NPTXRO95502 500 aa18.19■□□□□ 0.5
LINC00404-201ENST00000418660 BMP15O95972 392 aa18.19■□□□□ 0.5
LINC00404-201ENST00000418660 EFNA5P52803 228 aa18.19■□□□□ 0.5
LINC00404-201ENST00000418660 COASYQ13057 564 aa18.19■□□□□ 0.5
LINC00404-201ENST00000418660 PRPF4BQ13523 1007 aaKnown RBP18.19■□□□□ 0.5
LINC00404-201ENST00000418660 SMAD2Q15796 467 aaKnown RBP18.19■□□□□ 0.5
LINC00404-201ENST00000418660 KCNK18Q7Z418 384 aa18.19■□□□□ 0.5
LINC00404-201ENST00000418660 VPS52Q8N1B4 723 aa18.19■□□□□ 0.5
LINC00404-201ENST00000418660 VN1R2Q8NFZ6 395 aa18.19■□□□□ 0.5
LINC00404-201ENST00000418660 INTS4Q96HW7 963 aaKnown RBP18.19■□□□□ 0.5
LINC00404-201ENST00000418660 APOL6Q9BWW8 343 aa18.19■□□□□ 0.5
LINC00404-201ENST00000418660 NXF3Q9H4D5 531 aaKnown RBP18.19■□□□□ 0.5
LINC00404-201ENST00000418660 PRKAG3Q9UGI9 489 aa18.19■□□□□ 0.5
LINC00404-201ENST00000418660 FAN1Q9Y2M0 1017 aa18.19■□□□□ 0.5
LINC00404-201ENST00000418660 VPS37CA5D8V6 355 aaPredicted RBP18.18■□□□□ 0.5
LINC00404-201ENST00000418660 N4BP3O15049 544 aa18.18■□□□□ 0.5
LINC00404-201ENST00000418660 CXCL14O95715 111 aa18.18■□□□□ 0.5
LINC00404-201ENST00000418660 PRKCBP05771 671 aa18.18■□□□□ 0.5
LINC00404-201ENST00000418660 MLH1P40692 756 aa18.18■□□□□ 0.5
LINC00404-201ENST00000418660 KCNC3Q14003 757 aa18.18■□□□□ 0.5
LINC00404-201ENST00000418660 ZRSR1Q15695 479 aaKnown RBP18.18■□□□□ 0.5
LINC00404-201ENST00000418660 RINT1Q6NUQ1 792 aa18.18■□□□□ 0.5
LINC00404-201ENST00000418660 TMEM184AQ6ZMB5 413 aa18.18■□□□□ 0.5
LINC00404-201ENST00000418660 GJD3Q8N144 294 aa18.18■□□□□ 0.5
LINC00404-201ENST00000418660 BCL7CQ8WUZ0 217 aaPredicted RBP18.18■□□□□ 0.5
LINC00404-201ENST00000418660 AK8Q96MA6 479 aa18.18■□□□□ 0.5
LINC00404-201ENST00000418660 PNMA5Q96PV4 448 aa18.18■□□□□ 0.5
LINC00404-201ENST00000418660 NT5C3AQ9H0P0 336 aa18.18■□□□□ 0.5
LINC00404-201ENST00000418660 ZBP1Q9H171 429 aa18.18■□□□□ 0.5
LINC00404-201ENST00000418660 CD320Q9NPF0 282 aa18.18■□□□□ 0.5
LINC00404-201ENST00000418660 MIOSQ9NXC5 875 aa18.18■□□□□ 0.5
LINC00404-201ENST00000418660 DAXXQ9UER7 740 aaPredicted RBP18.18■□□□□ 0.5
LINC00404-201ENST00000418660 STK39Q9UEW8 545 aa18.18■□□□□ 0.5
LINC00404-201ENST00000418660 BARX2Q9UMQ3 279 aaPredicted RBP18.18■□□□□ 0.5
LINC00404-201ENST00000418660 ZMYM2Q9UBW7 1377 aa18.17■□□□□ 0.5
LINC00404-201ENST00000418660 C2orf71A6NGG8 1288 aa18.17■□□□□ 0.5
LINC00404-201ENST00000418660 TTLL13PA6NNM8 815 aa18.17■□□□□ 0.5
LINC00404-201ENST00000418660 NRP1O14786 923 aa18.17■□□□□ 0.5
LINC00404-201ENST00000418660 SLC26A4O43511 780 aa18.17■□□□□ 0.5
LINC00404-201ENST00000418660 SRGAP2BP0DMP2 458 aa18.17■□□□□ 0.5
LINC00404-201ENST00000418660 CTSAP10619 480 aa18.17■□□□□ 0.5
LINC00404-201ENST00000418660 LIG1P18858 919 aa18.17■□□□□ 0.5
LINC00404-201ENST00000418660 AKAP5P24588 427 aa18.17■□□□□ 0.5
LINC00404-201ENST00000418660 SCNN1GP51170 649 aa18.17■□□□□ 0.5
LINC00404-201ENST00000418660 RBM10P98175 930 aaKnown RBP18.17■□□□□ 0.5
LINC00404-201ENST00000418660 GIT2Q14161 759 aa18.17■□□□□ 0.5
LINC00404-201ENST00000418660 TMEM132AQ24JP5 1023 aa18.17■□□□□ 0.5
LINC00404-201ENST00000418660 C1orf186Q6ZWK4 172 aa18.17■□□□□ 0.5
LINC00404-201ENST00000418660 COLGALT2Q8IYK4 626 aa18.17■□□□□ 0.5
LINC00404-201ENST00000418660 DAW1Q8N136 415 aa18.17■□□□□ 0.5
LINC00404-201ENST00000418660 SMRP1Q8NCR6 262 aa18.17■□□□□ 0.5
LINC00404-201ENST00000418660 CDK5RAP3Q96JB5 506 aa18.17■□□□□ 0.5
LINC00404-201ENST00000418660 DRC1Q96MC2 740 aa18.17■□□□□ 0.5
LINC00404-201ENST00000418660 ZFP42Q96MM3 310 aa18.17■□□□□ 0.5
LINC00404-201ENST00000418660 KIFC3Q9BVG8 833 aa18.17■□□□□ 0.5
LINC00404-201ENST00000418660 RUSC1Q9BVN2 902 aa18.17■□□□□ 0.5
LINC00404-201ENST00000418660 TIPINQ9BVW5 301 aa18.17■□□□□ 0.5
LINC00404-201ENST00000418660 PDZD7Q9H5P4 517 aa18.17■□□□□ 0.5
LINC00404-201ENST00000418660 IRAK3Q9Y616 596 aa18.17■□□□□ 0.5
LINC00404-201ENST00000418660 K7ELQ4 463 aaPredicted RBP18.16■□□□□ 0.5
LINC00404-201ENST00000418660 K7ERI5 159 aa18.16■□□□□ 0.5
LINC00404-201ENST00000418660 HIP1RO75146 1068 aa18.16■□□□□ 0.5
LINC00404-201ENST00000418660 SYT1P21579 422 aa18.16■□□□□ 0.5
LINC00404-201ENST00000418660 PEX3P56589 373 aa18.16■□□□□ 0.5
LINC00404-201ENST00000418660 DSC1Q08554 894 aa18.16■□□□□ 0.5
LINC00404-201ENST00000418660 CABP7Q86V35 215 aa18.16■□□□□ 0.5
LINC00404-201ENST00000418660 ADHFE1Q8IWW8 467 aa18.16■□□□□ 0.5
LINC00404-201ENST00000418660 SYT2Q8N9I0 419 aaPredicted RBP18.16■□□□□ 0.5
LINC00404-201ENST00000418660 ADPGKQ9BRR6 497 aa18.16■□□□□ 0.5
LINC00404-201ENST00000418660 C17orf75Q9HAS0 396 aa18.16■□□□□ 0.5
LINC00404-201ENST00000418660 PARP2Q9UGN5 583 aa18.16■□□□□ 0.5
LINC00404-201ENST00000418660 C19orf67A6NJJ6 358 aa18.15■□□□□ 0.5
LINC00404-201ENST00000418660 CCDC169A6NNP5 214 aa18.15■□□□□ 0.5
LINC00404-201ENST00000418660 NR1I2O75469 434 aa18.15■□□□□ 0.5
LINC00404-201ENST00000418660 EDN1P05305 212 aa18.15■□□□□ 0.5
LINC00404-201ENST00000418660 GUCY2CP25092 1073 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms