RNA–Protein interactions for RNA: ENST00000418646.5

GPCPD1-202, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 4,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-202ENST00000418646 IKZF4Q9H2S9 585 aa4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 MAGEC2Q9UBF1 373 aaPredicted RBP4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 PRR12Q9ULL5 1215 aa4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 RPL26L1Q9UNX3 145 aaKnown RBP4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 TRPC6Q9Y210 931 aa4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 CALUO43852 315 aaPredicted RBP4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 CETPP11597 493 aa4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 CHRNA3P32297 505 aa4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 MAGEA3P43357 314 aa4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 MTIF2P46199 727 aaKnown RBP4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 PRELPP51888 382 aa4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 PRPF4BQ13523 1007 aaKnown RBP4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 COG2Q14746 738 aa4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 LRRC41Q15345 812 aa4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 OASLQ15646 514 aaKnown RBP4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 ASIC2Q16515 512 aa4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 EXOC3L4Q17RC7 722 aa4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 GRIPAP1Q4V328 841 aa4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 RNF43Q68DV7 783 aa4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 FAM196AQ6ZSG2 479 aa4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 GPBP1Q86WP2 473 aa4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 DHX37Q8IY37 1157 aaKnown RBP4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 TMEM161BQ8NDZ6 487 aa4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 USP6NLQ92738 828 aa4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 SEMA4DQ92854 862 aa4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 CCDC43Q96MW1 224 aaKnown RBP4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 MOV10L1Q9BXT6 1211 aaKnown RBP4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 PI4KBQ9UBF8 816 aa4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 ADAMTS1Q9UHI8 967 aa4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 GTF3C4Q9UKN8 822 aa4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 DOCK4Q8N1I0 1966 aa4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 SHTN1A0MZ66 631 aa4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 TMCO5BA8MYB1 307 aa4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 ECE2O60344 883 aa4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 UFL1O94874 794 aa4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 FDX1P10109 184 aa4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 RARRES1P49788 294 aa4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 DLG4P78352 724 aa4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 TRAPPC3LQ5T215 181 aa4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 PLEKHA7Q6IQ23 1121 aa4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 LIMS2Q7Z4I7 341 aa4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 JAMLQ86YT9 394 aa4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 DPF3Q92784 378 aa4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 HOOK2Q96ED9 719 aa4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 AMNQ9BXJ7 453 aa4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 INTS2Q9H0H0 1204 aaKnown RBP4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 WNT8AQ9H1J5 351 aa4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 ZSWIM4Q9H7M6 989 aa4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 AGO4Q9HCK5 861 aaKnown RBP4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 KANSL3Q9P2N6 904 aa4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 CTNNAL1Q9UBT7 734 aa4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 GRID1Q9ULK0 1009 aa4.83□□□□□ -1.64
GPCPD1-202ENST00000418646 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.82□□□□□ -1.64
GPCPD1-202ENST00000418646 GMNCA6NCL1 334 aa4.82□□□□□ -1.64
GPCPD1-202ENST00000418646 ERICH4A6NGS2 130 aa4.82□□□□□ -1.64
GPCPD1-202ENST00000418646 USP17L15C9J2P7 530 aa4.82□□□□□ -1.64
GPCPD1-202ENST00000418646 USP17L13C9JLJ4 530 aa4.82□□□□□ -1.64
GPCPD1-202ENST00000418646 USP17L11C9JVI0 530 aa4.82□□□□□ -1.64
GPCPD1-202ENST00000418646 USP17L18D6R9N7 530 aa4.82□□□□□ -1.64
GPCPD1-202ENST00000418646 USP17L22D6RA61 530 aa4.82□□□□□ -1.64
GPCPD1-202ENST00000418646 USP17L17D6RBQ6 530 aa4.82□□□□□ -1.64
GPCPD1-202ENST00000418646 USP17L19D6RCP7 530 aa4.82□□□□□ -1.64
GPCPD1-202ENST00000418646 USP17L20D6RJB6 530 aa4.82□□□□□ -1.64
GPCPD1-202ENST00000418646 FTCDO95954 541 aa4.82□□□□□ -1.64
GPCPD1-202ENST00000418646 FGFR1P11362 822 aa4.82□□□□□ -1.64
GPCPD1-202ENST00000418646 EDNRBP24530 442 aa4.82□□□□□ -1.64
GPCPD1-202ENST00000418646 CXCR5P32302 372 aa4.82□□□□□ -1.64
GPCPD1-202ENST00000418646 ZNF280AP59817 542 aaPredicted RBP4.82□□□□□ -1.64
GPCPD1-202ENST00000418646 GUCY1A3Q02108 690 aa4.82□□□□□ -1.64
GPCPD1-202ENST00000418646 USP17L24Q0WX57 530 aa4.82□□□□□ -1.64
GPCPD1-202ENST00000418646 SPA17Q15506 151 aa4.82□□□□□ -1.64
GPCPD1-202ENST00000418646 TARBP2Q15633 366 aaKnown RBP4.82□□□□□ -1.64
GPCPD1-202ENST00000418646 FAM98CQ17RN3 349 aaKnown RBP4.82□□□□□ -1.64
GPCPD1-202ENST00000418646 C11orf91Q3C1V1 193 aa4.82□□□□□ -1.64
GPCPD1-202ENST00000418646 CDCA2Q69YH5 1023 aaPredicted RBP4.82□□□□□ -1.64
GPCPD1-202ENST00000418646 USP17L6PQ6QN14 398 aa4.82□□□□□ -1.64
GPCPD1-202ENST00000418646 B4GALNT4Q76KP1 1039 aa4.82□□□□□ -1.64
GPCPD1-202ENST00000418646 EXOC3L1Q86VI1 746 aa4.82□□□□□ -1.64
GPCPD1-202ENST00000418646 ZNF677Q86XU0 584 aa4.82□□□□□ -1.64
GPCPD1-202ENST00000418646 PHF13Q86YI8 300 aaPredicted RBP4.82□□□□□ -1.64
GPCPD1-202ENST00000418646 LRRC47Q8N1G4 583 aaKnown RBP4.82□□□□□ -1.64
GPCPD1-202ENST00000418646 LINC01465Q8N7H1 131 aa4.82□□□□□ -1.64
GPCPD1-202ENST00000418646 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.82□□□□□ -1.64
GPCPD1-202ENST00000418646 KRT35Q92764 455 aa4.82□□□□□ -1.64
GPCPD1-202ENST00000418646 VCPIP1Q96JH7 1222 aa4.82□□□□□ -1.64
GPCPD1-202ENST00000418646 ANKRD27Q96NW4 1050 aa4.82□□□□□ -1.64
GPCPD1-202ENST00000418646 TSG101Q99816 390 aa4.82□□□□□ -1.64
GPCPD1-202ENST00000418646 C11orf84Q9BUA3 381 aaPredicted RBP4.82□□□□□ -1.64
GPCPD1-202ENST00000418646 TMEM117Q9H0C3 514 aa4.82□□□□□ -1.64
GPCPD1-202ENST00000418646 THAP2Q9H0W7 228 aa4.82□□□□□ -1.64
GPCPD1-202ENST00000418646 PDZD7Q9H5P4 517 aa4.82□□□□□ -1.64
GPCPD1-202ENST00000418646 FAM124BQ9H5Z6 455 aaPredicted RBP4.82□□□□□ -1.64
GPCPD1-202ENST00000418646 SEC63Q9UGP8 760 aaKnown RBP4.82□□□□□ -1.64
GPCPD1-202ENST00000418646 EFR3BQ9Y2G0 817 aa4.82□□□□□ -1.64
GPCPD1-202ENST00000418646 SHROOM3Q8TF72 1996 aa4.82□□□□□ -1.64
GPCPD1-202ENST00000418646 OBSL1O75147 1896 aa4.82□□□□□ -1.64
GPCPD1-202ENST00000418646 TCRBV7S2A1N4TA0A589 114 aa4.82□□□□□ -1.64
GPCPD1-202ENST00000418646 ZNF487B1APH4 448 aa4.82□□□□□ -1.64
GPCPD1-202ENST00000418646 TTI1O43156 1089 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms