RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 EFCAB8A8MWE9 144 aa9.08□□□□□ -0.96
USP54-203ENST00000418501 RIOK3O14730 519 aaKnown RBP9.08□□□□□ -0.96
USP54-203ENST00000418501 TOM1L1O75674 476 aa9.08□□□□□ -0.96
USP54-203ENST00000418501 GRM1Q13255 1194 aa9.08□□□□□ -0.96
USP54-203ENST00000418501 ENOX2Q16206 610 aaKnown RBP9.08□□□□□ -0.96
USP54-203ENST00000418501 SLC18A3Q16572 532 aa9.08□□□□□ -0.96
USP54-203ENST00000418501 ZNF792Q3KQV3 632 aa9.08□□□□□ -0.96
USP54-203ENST00000418501 DUSP28Q4G0W2 176 aa9.08□□□□□ -0.96
USP54-203ENST00000418501 TRIM72Q6ZMU5 477 aa9.08□□□□□ -0.96
USP54-203ENST00000418501 SRGAP1Q7Z6B7 1085 aa9.08□□□□□ -0.96
USP54-203ENST00000418501 KCNN1Q92952 543 aa9.08□□□□□ -0.96
USP54-203ENST00000418501 ANKFY1Q9P2R3 1169 aa9.08□□□□□ -0.96
USP54-203ENST00000418501 CDC23Q9UJX2 597 aa9.08□□□□□ -0.96
USP54-203ENST00000418501 PPP1R37O75864 691 aa9.08□□□□□ -0.96
USP54-203ENST00000418501 PON1P27169 355 aa9.08□□□□□ -0.96
USP54-203ENST00000418501 MARK3P27448 753 aa9.08□□□□□ -0.96
USP54-203ENST00000418501 RDXP35241 583 aaKnown RBP9.08□□□□□ -0.96
USP54-203ENST00000418501 GRB14Q14449 540 aa9.08□□□□□ -0.96
USP54-203ENST00000418501 UGCGQ16739 394 aa9.08□□□□□ -0.96
USP54-203ENST00000418501 ODF2Q5BJF6 829 aa9.08□□□□□ -0.96
USP54-203ENST00000418501 MAMDC4Q6UXC1 1216 aa9.08□□□□□ -0.96
USP54-203ENST00000418501 TMEM143Q96AN5 459 aa9.08□□□□□ -0.96
USP54-203ENST00000418501 APBA2Q99767 749 aa9.08□□□□□ -0.96
USP54-203ENST00000418501 HYOU1Q9Y4L1 999 aa9.08□□□□□ -0.96
USP54-203ENST00000418501 SAR1BQ9Y6B6 198 aa9.08□□□□□ -0.96
USP54-203ENST00000418501 PIGRP01833 764 aa9.08□□□□□ -0.96
USP54-203ENST00000418501 DLATP10515 647 aaKnown RBP9.08□□□□□ -0.96
USP54-203ENST00000418501 ARL2P36404 184 aa9.08□□□□□ -0.96
USP54-203ENST00000418501 CASP5P51878 434 aa9.08□□□□□ -0.96
USP54-203ENST00000418501 MAPK7Q13164 816 aa9.08□□□□□ -0.96
USP54-203ENST00000418501 LY6KQ17RY6 165 aa9.08□□□□□ -0.96
USP54-203ENST00000418501 ZNF677Q86XU0 584 aa9.08□□□□□ -0.96
USP54-203ENST00000418501 RHOT2Q8IXI1 618 aa9.08□□□□□ -0.96
USP54-203ENST00000418501 TSPAN18Q96SJ8 248 aa9.08□□□□□ -0.96
USP54-203ENST00000418501 CCDC94Q9BW85 323 aaPredicted RBP9.08□□□□□ -0.96
USP54-203ENST00000418501 UBE2TQ9NPD8 197 aaPredicted RBP9.08□□□□□ -0.96
USP54-203ENST00000418501 RBAKQ9NYW8 714 aaPredicted RBP9.08□□□□□ -0.96
USP54-203ENST00000418501 ARHGAP28Q9P2N2 729 aa9.08□□□□□ -0.96
USP54-203ENST00000418501 GSTTP1A0A1W2PQM5 241 aa9.07□□□□□ -0.96
USP54-203ENST00000418501 SRGAP2CP0DJJ0 459 aa9.07□□□□□ -0.96
USP54-203ENST00000418501 GOLGA8FQ08AF8 430 aa9.07□□□□□ -0.96
USP54-203ENST00000418501 GOLGA8DPQ0D2H9 430 aa9.07□□□□□ -0.96
USP54-203ENST00000418501 EFCAB12Q6NXP0 572 aa9.07□□□□□ -0.96
USP54-203ENST00000418501 TRIM65Q6PJ69 517 aa9.07□□□□□ -0.96
USP54-203ENST00000418501 RAD9BQ6WBX8 426 aa9.07□□□□□ -0.96
USP54-203ENST00000418501 REXO1L1PQ8IX06 675 aa9.07□□□□□ -0.96
USP54-203ENST00000418501 PPM1KQ8N3J5 372 aa9.07□□□□□ -0.96
USP54-203ENST00000418501 RNF149Q8NC42 400 aa9.07□□□□□ -0.96
USP54-203ENST00000418501 NLRP7Q8WX94 980 aa9.07□□□□□ -0.96
USP54-203ENST00000418501 FAM213AQ9BRX8 229 aa9.07□□□□□ -0.96
USP54-203ENST00000418501 AGPAT5Q9NUQ2 364 aa9.07□□□□□ -0.96
USP54-203ENST00000418501 ANKRD62A6NC57 917 aa9.07□□□□□ -0.96
USP54-203ENST00000418501 OGTO15294 1046 aa9.07□□□□□ -0.96
USP54-203ENST00000418501 KRT5P13647 590 aa9.07□□□□□ -0.96
USP54-203ENST00000418501 PRKCIP41743 596 aa9.07□□□□□ -0.96
USP54-203ENST00000418501 PSMD6Q15008 389 aa9.07□□□□□ -0.96
USP54-203ENST00000418501 ARHGAP44Q17R89 818 aa9.07□□□□□ -0.96
USP54-203ENST00000418501 DCAF4L1Q3SXM0 396 aa9.07□□□□□ -0.96
USP54-203ENST00000418501 OLFML2BQ68BL8 750 aa9.07□□□□□ -0.96
USP54-203ENST00000418501 NT5DC4Q86YG4 428 aa9.07□□□□□ -0.96
USP54-203ENST00000418501 RHPN2Q8IUC4 686 aa9.07□□□□□ -0.96
USP54-203ENST00000418501 HHIPL1Q96JK4 782 aa9.07□□□□□ -0.96
USP54-203ENST00000418501 PURBQ96QR8 312 aaKnown RBP9.07□□□□□ -0.96
USP54-203ENST00000418501 WDR90Q96KV7 1748 aa9.07□□□□□ -0.96
USP54-203ENST00000418501 RBM47A0AV96 593 aaKnown RBP9.07□□□□□ -0.96
USP54-203ENST00000418501 GPC3P51654 580 aa9.07□□□□□ -0.96
USP54-203ENST00000418501 CYP24A1Q07973 514 aa9.07□□□□□ -0.96
USP54-203ENST00000418501 NOGQ13253 232 aa9.07□□□□□ -0.96
USP54-203ENST00000418501 DRAP1Q14919 205 aaPredicted RBP9.07□□□□□ -0.96
USP54-203ENST00000418501 DUOXA2Q1HG44 320 aa9.07□□□□□ -0.96
USP54-203ENST00000418501 KIAA0753Q2KHM9 967 aa9.07□□□□□ -0.96
USP54-203ENST00000418501 ACRBPQ8NEB7 543 aa9.07□□□□□ -0.96
USP54-203ENST00000418501 TRIM6Q9C030 488 aaPredicted RBP9.07□□□□□ -0.96
USP54-203ENST00000418501 GOLGA6L10A0A0M3HER8 536 aa9.06□□□□□ -0.96
USP54-203ENST00000418501 MACROD2A1Z1Q3 448 aa9.06□□□□□ -0.96
USP54-203ENST00000418501 LGALS2P05162 132 aa9.06□□□□□ -0.96
USP54-203ENST00000418501 AXLP30530 894 aa9.06□□□□□ -0.96
USP54-203ENST00000418501 GTF2F1P35269 517 aaKnown RBP eCLIP9.06□□□□□ -0.96
USP54-203ENST00000418501 IGBP1P78318 339 aa9.06□□□□□ -0.96
USP54-203ENST00000418501 PLCB4Q15147 1175 aa9.06□□□□□ -0.96
USP54-203ENST00000418501 ZNF568Q3ZCX4 644 aa9.06□□□□□ -0.96
USP54-203ENST00000418501 ZNF526Q8TF50 670 aaPredicted RBP9.06□□□□□ -0.96
USP54-203ENST00000418501 U2AF1L4Q8WU68 220 aaKnown RBP9.06□□□□□ -0.96
USP54-203ENST00000418501 PRPF31Q8WWY3 499 aaKnown RBP9.06□□□□□ -0.96
USP54-203ENST00000418501 NLRP4Q96MN2 994 aa9.06□□□□□ -0.96
USP54-203ENST00000418501 GPRC5CQ9NQ84 441 aa9.06□□□□□ -0.96
USP54-203ENST00000418501 TOPORSQ9NS56 1045 aaPredicted RBP9.06□□□□□ -0.96
USP54-203ENST00000418501 ACKR2O00590 384 aa9.06□□□□□ -0.96
USP54-203ENST00000418501 ZBTB39O15060 712 aa9.06□□□□□ -0.96
USP54-203ENST00000418501 HARSP12081 509 aaKnown RBP9.06□□□□□ -0.96
USP54-203ENST00000418501 GCLMP48507 274 aa9.06□□□□□ -0.96
USP54-203ENST00000418501 LAMTOR4Q0VGL1 99 aa9.06□□□□□ -0.96
USP54-203ENST00000418501 ALKBH5Q6P6C2 394 aaKnown RBP9.06□□□□□ -0.96
USP54-203ENST00000418501 MPZL3Q6UWV2 235 aa9.06□□□□□ -0.96
USP54-203ENST00000418501 MFSD14AQ96MC6 490 aa9.06□□□□□ -0.96
USP54-203ENST00000418501 CGRRF1Q99675 332 aa9.06□□□□□ -0.96
USP54-203ENST00000418501 STRA6Q9BX79 667 aa9.06□□□□□ -0.96
USP54-203ENST00000418501 TTYH3Q9C0H2 523 aa9.06□□□□□ -0.96
USP54-203ENST00000418501 RAB20Q9NX57 234 aa9.06□□□□□ -0.96
USP54-203ENST00000418501 H3BRB1 525 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms