RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 EFCAB12Q6NXP0 572 aa4.52□□□□□ -1.69
TRAPPC13-203ENST00000415825 LRP10Q7Z4F1 713 aa4.52□□□□□ -1.69
TRAPPC13-203ENST00000415825 MRPL4Q9BYD3 311 aaKnown RBP4.52□□□□□ -1.69
TRAPPC13-203ENST00000415825 MTG2Q9H4K7 406 aa4.52□□□□□ -1.69
TRAPPC13-203ENST00000415825 CABP5Q9NP86 173 aa4.52□□□□□ -1.69
TRAPPC13-203ENST00000415825 ING3Q9NXR8 418 aa4.52□□□□□ -1.69
TRAPPC13-203ENST00000415825 FPGT-TNNI3KV9GXZ4 949 aa4.52□□□□□ -1.69
TRAPPC13-203ENST00000415825 A0A0A6YYJ9 748 aa4.51□□□□□ -1.69
TRAPPC13-203ENST00000415825 KCNQ2O43526 872 aa4.51□□□□□ -1.69
TRAPPC13-203ENST00000415825 ORC4O43929 436 aa4.51□□□□□ -1.69
TRAPPC13-203ENST00000415825 ONECUT2O95948 504 aa4.51□□□□□ -1.69
TRAPPC13-203ENST00000415825 FDXRP22570 491 aa4.51□□□□□ -1.69
TRAPPC13-203ENST00000415825 XPAP23025 273 aaPredicted RBP4.51□□□□□ -1.69
TRAPPC13-203ENST00000415825 FOXF2Q12947 444 aa4.51□□□□□ -1.69
TRAPPC13-203ENST00000415825 MRPL49Q13405 166 aaKnown RBP4.51□□□□□ -1.69
TRAPPC13-203ENST00000415825 TP53BP2Q13625 1128 aa4.51□□□□□ -1.69
TRAPPC13-203ENST00000415825 PHYKPLQ8IUZ5 450 aa4.51□□□□□ -1.69
TRAPPC13-203ENST00000415825 UNC5BQ8IZJ1 945 aa4.51□□□□□ -1.69
TRAPPC13-203ENST00000415825 CPEB1Q9BZB8 566 aaKnown RBP4.51□□□□□ -1.69
TRAPPC13-203ENST00000415825 NOX1Q9Y5S8 564 aa4.51□□□□□ -1.69
TRAPPC13-203ENST00000415825 ST20-MTHFSA0A0A6YYL1 179 aa4.5□□□□□ -1.69
TRAPPC13-203ENST00000415825 CDKL5O76039 1030 aa4.5□□□□□ -1.69
TRAPPC13-203ENST00000415825 CBSLP0DN79 551 aa4.5□□□□□ -1.69
TRAPPC13-203ENST00000415825 CBSP35520 551 aa4.5□□□□□ -1.69
TRAPPC13-203ENST00000415825 RESTQ13127 1097 aa4.5□□□□□ -1.69
TRAPPC13-203ENST00000415825 AKNAD1Q5T1N1 836 aa4.5□□□□□ -1.69
TRAPPC13-203ENST00000415825 ZZZ3Q8IYH5 903 aa4.5□□□□□ -1.69
TRAPPC13-203ENST00000415825 C9orf106Q8NAJ2 232 aa4.5□□□□□ -1.69
TRAPPC13-203ENST00000415825 FAM98AQ8NCA5 519 aaKnown RBP4.5□□□□□ -1.69
TRAPPC13-203ENST00000415825 CHST14Q8NCH0 376 aa4.5□□□□□ -1.69
TRAPPC13-203ENST00000415825 ZSWIM2Q8NEG5 633 aa4.5□□□□□ -1.69
TRAPPC13-203ENST00000415825 OR10H5Q8NGA6 315 aa4.5□□□□□ -1.69
TRAPPC13-203ENST00000415825 ALOXE3Q9BYJ1 711 aa4.5□□□□□ -1.69
TRAPPC13-203ENST00000415825 PITHD1Q9GZP4 211 aaPredicted RBP4.5□□□□□ -1.69
TRAPPC13-203ENST00000415825 CHST2Q9Y4C5 530 aa4.5□□□□□ -1.69
TRAPPC13-203ENST00000415825 LEFTY2O00292 366 aa4.49□□□□□ -1.69
TRAPPC13-203ENST00000415825 RBMXL2O75526 392 aaKnown RBP4.49□□□□□ -1.69
TRAPPC13-203ENST00000415825 BMP15O95972 392 aa4.49□□□□□ -1.69
TRAPPC13-203ENST00000415825 GAAP10253 952 aa4.49□□□□□ -1.69
TRAPPC13-203ENST00000415825 KRTAP10-7P60409 375 aaPredicted RBP4.49□□□□□ -1.69
TRAPPC13-203ENST00000415825 DRICH1Q6PGQ1 229 aaPredicted RBP4.49□□□□□ -1.69
TRAPPC13-203ENST00000415825 KIAA1958Q8N8K9 716 aa4.49□□□□□ -1.69
TRAPPC13-203ENST00000415825 SCLYQ96I15 445 aa4.49□□□□□ -1.69
TRAPPC13-203ENST00000415825 CDC5LQ99459 802 aaKnown RBP4.49□□□□□ -1.69
TRAPPC13-203ENST00000415825 HIRIP3Q9BW71 556 aaPredicted RBP4.49□□□□□ -1.69
TRAPPC13-203ENST00000415825 REXO4Q9GZR2 422 aaKnown RBP4.49□□□□□ -1.69
TRAPPC13-203ENST00000415825 SEMA4GQ9NTN9 838 aa4.49□□□□□ -1.69
TRAPPC13-203ENST00000415825 TBCCD1Q9NVR7 557 aa4.49□□□□□ -1.69
TRAPPC13-203ENST00000415825 SLC17A6Q9P2U8 582 aa4.49□□□□□ -1.69
TRAPPC13-203ENST00000415825 ATP11BQ9Y2G3 1177 aa4.49□□□□□ -1.69
TRAPPC13-203ENST00000415825 MAST3O60307 1309 aa4.48□□□□□ -1.69
TRAPPC13-203ENST00000415825 B5MCH6 92 aa4.48□□□□□ -1.69
TRAPPC13-203ENST00000415825 NRP2O60462 931 aa4.48□□□□□ -1.69
TRAPPC13-203ENST00000415825 OPHN1O60890 802 aa4.48□□□□□ -1.69
TRAPPC13-203ENST00000415825 PROP1O75360 226 aa4.48□□□□□ -1.69
TRAPPC13-203ENST00000415825 SPDEFO95238 335 aa4.48□□□□□ -1.69
TRAPPC13-203ENST00000415825 EGR2P11161 476 aaPredicted RBP4.48□□□□□ -1.69
TRAPPC13-203ENST00000415825 ZSCAN20P17040 1043 aaPredicted RBP4.48□□□□□ -1.69
TRAPPC13-203ENST00000415825 FLT3P36888 993 aa4.48□□□□□ -1.69
TRAPPC13-203ENST00000415825 MPLP40238 635 aa4.48□□□□□ -1.69
TRAPPC13-203ENST00000415825 CACNA2D1P54289 1103 aa4.48□□□□□ -1.69
TRAPPC13-203ENST00000415825 MRPS35P82673 323 aaKnown RBP4.48□□□□□ -1.69
TRAPPC13-203ENST00000415825 KIAA1841Q6NSI8 718 aa4.48□□□□□ -1.69
TRAPPC13-203ENST00000415825 PTF1AQ7RTS3 328 aa4.48□□□□□ -1.69
TRAPPC13-203ENST00000415825 KANSL1Q7Z3B3 1105 aa4.48□□□□□ -1.69
TRAPPC13-203ENST00000415825 GRASPQ7Z6J2 395 aaPredicted RBP4.48□□□□□ -1.69
TRAPPC13-203ENST00000415825 XYLT1Q86Y38 959 aa4.48□□□□□ -1.69
TRAPPC13-203ENST00000415825 ASB10Q8WXI3 467 aa4.48□□□□□ -1.69
TRAPPC13-203ENST00000415825 LSM14BQ9BX40 385 aaKnown RBP4.48□□□□□ -1.69
TRAPPC13-203ENST00000415825 INTS7Q9NVH2 962 aaKnown RBP4.48□□□□□ -1.69
TRAPPC13-203ENST00000415825 SAMD15Q9P1V8 674 aa4.48□□□□□ -1.69
TRAPPC13-203ENST00000415825 DMTF1Q9Y222 760 aa4.48□□□□□ -1.69
TRAPPC13-203ENST00000415825 USP15Q9Y4E8 981 aaPredicted RBP4.48□□□□□ -1.69
TRAPPC13-203ENST00000415825 PTPDC1A2A3K4 754 aa4.47□□□□□ -1.69
TRAPPC13-203ENST00000415825 M0R2C6 588 aa4.47□□□□□ -1.69
TRAPPC13-203ENST00000415825 PRPF6O94906 941 aaKnown RBP4.47□□□□□ -1.69
TRAPPC13-203ENST00000415825 CLEC2LP0C7M8 214 aa4.47□□□□□ -1.69
TRAPPC13-203ENST00000415825 KCNA6P17658 529 aa4.47□□□□□ -1.69
TRAPPC13-203ENST00000415825 MECP2P51608 486 aaKnown RBP4.47□□□□□ -1.69
TRAPPC13-203ENST00000415825 NRG3P56975 720 aa4.47□□□□□ -1.69
TRAPPC13-203ENST00000415825 MYBPC3Q14896 1274 aa4.47□□□□□ -1.69
TRAPPC13-203ENST00000415825 ZNF169Q14929 603 aaPredicted RBP4.47□□□□□ -1.69
TRAPPC13-203ENST00000415825 SRSF7Q16629 238 aaKnown RBP eCLIP4.47□□□□□ -1.69
TRAPPC13-203ENST00000415825 PDCD4Q53EL6 469 aaKnown RBP4.47□□□□□ -1.69
TRAPPC13-203ENST00000415825 ZCCHC8Q6NZY4 707 aaKnown RBP4.47□□□□□ -1.69
TRAPPC13-203ENST00000415825 ABHD17CQ6PCB6 329 aa4.47□□□□□ -1.69
TRAPPC13-203ENST00000415825 ZFP28Q8NHY6 868 aa4.47□□□□□ -1.69
TRAPPC13-203ENST00000415825 TFAP2CQ92754 450 aa4.47□□□□□ -1.69
TRAPPC13-203ENST00000415825 FERMT2Q96AC1 680 aa4.47□□□□□ -1.69
TRAPPC13-203ENST00000415825 C1QTNF7Q9BXJ2 289 aa4.47□□□□□ -1.69
TRAPPC13-203ENST00000415825 KRTAP1-5Q9BYS1 174 aa4.47□□□□□ -1.69
TRAPPC13-203ENST00000415825 CASS4Q9NQ75 786 aa4.47□□□□□ -1.69
TRAPPC13-203ENST00000415825 MAP3K2Q9Y2U5 619 aa4.47□□□□□ -1.69
TRAPPC13-203ENST00000415825 COL11A2P13942 1736 aaPredicted RBP4.46□□□□□ -1.69
TRAPPC13-203ENST00000415825 MATN4O95460 622 aa4.46□□□□□ -1.7
TRAPPC13-203ENST00000415825 IGFALSP35858 605 aa4.46□□□□□ -1.7
TRAPPC13-203ENST00000415825 RARRES1P49788 294 aa4.46□□□□□ -1.7
TRAPPC13-203ENST00000415825 APBA1Q02410 837 aa4.46□□□□□ -1.7
TRAPPC13-203ENST00000415825 EZH2Q15910 746 aaKnown RBP4.46□□□□□ -1.7
TRAPPC13-203ENST00000415825 LMBR1LQ6UX01 489 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms